RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 SMIM10L2AP0DMW4 78 aa11.85□□□□□ -0.51
CDCA3-208ENST00000540683 SMIM10L2BP0DMW5 78 aa11.85□□□□□ -0.51
CDCA3-208ENST00000540683 TCF7P36402 384 aaPredicted RBP11.85□□□□□ -0.51
CDCA3-208ENST00000540683 THPOP40225 353 aa11.85□□□□□ -0.51
CDCA3-208ENST00000540683 CEP55Q53EZ4 464 aa11.85□□□□□ -0.51
CDCA3-208ENST00000540683 WWC2Q6AWC2 1192 aa11.85□□□□□ -0.51
CDCA3-208ENST00000540683 RASEFQ8IZ41 740 aa11.85□□□□□ -0.51
CDCA3-208ENST00000540683 REXO1Q8N1G1 1221 aaKnown RBP11.85□□□□□ -0.51
CDCA3-208ENST00000540683 CMTR1Q8N1G2 835 aaKnown RBP11.85□□□□□ -0.51
CDCA3-208ENST00000540683 MYLIPQ8WY64 445 aa11.85□□□□□ -0.51
CDCA3-208ENST00000540683 SEPT8Q92599 483 aa11.85□□□□□ -0.51
CDCA3-208ENST00000540683 BRF1Q92994 677 aa11.85□□□□□ -0.51
CDCA3-208ENST00000540683 MXRA8Q9BRK3 442 aa11.85□□□□□ -0.51
CDCA3-208ENST00000540683 RNF26Q9BY78 433 aaPredicted RBP11.85□□□□□ -0.51
CDCA3-208ENST00000540683 TM6SF1Q9BZW5 370 aa11.85□□□□□ -0.51
CDCA3-208ENST00000540683 SH3GLB2Q9NR46 395 aa11.85□□□□□ -0.51
CDCA3-208ENST00000540683 CXXC1Q9P0U4 656 aaPredicted RBP11.85□□□□□ -0.51
CDCA3-208ENST00000540683 SLC9A2Q9UBY0 812 aa11.85□□□□□ -0.51
CDCA3-208ENST00000540683 SNX14Q9Y5W7 946 aa11.85□□□□□ -0.51
CDCA3-208ENST00000540683 PRPF3O43395 683 aaKnown RBP11.84□□□□□ -0.51
CDCA3-208ENST00000540683 TLL1O43897 1013 aa11.84□□□□□ -0.51
CDCA3-208ENST00000540683 LGR5O75473 907 aa11.84□□□□□ -0.51
CDCA3-208ENST00000540683 AMHP03971 560 aa11.84□□□□□ -0.51
CDCA3-208ENST00000540683 XBP1P17861 261 aa11.84□□□□□ -0.51
CDCA3-208ENST00000540683 HOXC8P31273 242 aa11.84□□□□□ -0.51
CDCA3-208ENST00000540683 SREBF1P36956 1147 aa11.84□□□□□ -0.51
CDCA3-208ENST00000540683 NBR1Q14596 966 aa11.84□□□□□ -0.51
CDCA3-208ENST00000540683 ANKRD1Q15327 319 aa11.84□□□□□ -0.51
CDCA3-208ENST00000540683 AAK1Q2M2I8 961 aa11.84□□□□□ -0.51
CDCA3-208ENST00000540683 ADCK5Q3MIX3 580 aa11.84□□□□□ -0.51
CDCA3-208ENST00000540683 ODR4Q5SWX8 454 aa11.84□□□□□ -0.51
CDCA3-208ENST00000540683 FAM160B1Q5W0V3 765 aa11.84□□□□□ -0.51
CDCA3-208ENST00000540683 GALNT17Q6IS24 598 aa11.84□□□□□ -0.51
CDCA3-208ENST00000540683 RUFY3Q7L099 469 aa11.84□□□□□ -0.51
CDCA3-208ENST00000540683 RPAINQ86UA6 219 aa11.84□□□□□ -0.51
CDCA3-208ENST00000540683 HERC6Q8IVU3 1022 aa11.84□□□□□ -0.51
CDCA3-208ENST00000540683 HS6ST3Q8IZP7 471 aa11.84□□□□□ -0.51
CDCA3-208ENST00000540683 IL27Q8NEV9 243 aa11.84□□□□□ -0.51
CDCA3-208ENST00000540683 GPKOWQ92917 476 aaPredicted RBP eCLIP11.84□□□□□ -0.51
CDCA3-208ENST00000540683 AGXT2Q9BYV1 514 aa11.84□□□□□ -0.51
CDCA3-208ENST00000540683 BRPF3Q9ULD4 1205 aa11.84□□□□□ -0.51
CDCA3-208ENST00000540683 TRIP12Q14669 1992 aaPredicted RBP11.84□□□□□ -0.51
CDCA3-208ENST00000540683 STXBP3O00186 592 aa11.83□□□□□ -0.52
CDCA3-208ENST00000540683 KCNA2P16389 499 aa11.83□□□□□ -0.52
CDCA3-208ENST00000540683 ITGB5P18084 799 aa11.83□□□□□ -0.52
CDCA3-208ENST00000540683 EVCP57679 992 aa11.83□□□□□ -0.52
CDCA3-208ENST00000540683 ARHGAP4P98171 946 aa11.83□□□□□ -0.52
CDCA3-208ENST00000540683 PPFIA1Q13136 1202 aa11.83□□□□□ -0.52
CDCA3-208ENST00000540683 GRIN2CQ14957 1233 aa11.83□□□□□ -0.52
CDCA3-208ENST00000540683 UBE2SQ16763 222 aa11.83□□□□□ -0.52
CDCA3-208ENST00000540683 ZNF618Q5T7W0 954 aa11.83□□□□□ -0.52
CDCA3-208ENST00000540683 UTP14CQ5TAP6 766 aaKnown RBP11.83□□□□□ -0.52
CDCA3-208ENST00000540683 PLPPR4Q7Z2D5 763 aa11.83□□□□□ -0.52
CDCA3-208ENST00000540683 ZNF710Q8N1W2 664 aa11.83□□□□□ -0.52
CDCA3-208ENST00000540683 USP38Q8NB14 1042 aa11.83□□□□□ -0.52
CDCA3-208ENST00000540683 ZNF274Q96GC6 653 aaPredicted RBP11.83□□□□□ -0.52
CDCA3-208ENST00000540683 RAD9AQ99638 391 aa11.83□□□□□ -0.52
CDCA3-208ENST00000540683 ANO3Q9BYT9 981 aa11.83□□□□□ -0.52
CDCA3-208ENST00000540683 ZMYND12Q9H0C1 365 aa11.83□□□□□ -0.52
CDCA3-208ENST00000540683 NKX2-4Q9H2Z4 354 aa11.83□□□□□ -0.52
CDCA3-208ENST00000540683 RNPEPQ9H4A4 650 aa11.83□□□□□ -0.52
CDCA3-208ENST00000540683 KCNH7Q9NS40 1196 aa11.83□□□□□ -0.52
CDCA3-208ENST00000540683 TBC1D22BQ9NU19 505 aa11.83□□□□□ -0.52
CDCA3-208ENST00000540683 INSL6Q9Y581 213 aa11.83□□□□□ -0.52
CDCA3-208ENST00000540683 hCG_1642624A0A1W2PR95 340 aa11.82□□□□□ -0.52
CDCA3-208ENST00000540683 MEIS1O00470 390 aa11.82□□□□□ -0.52
CDCA3-208ENST00000540683 DLL1O00548 723 aa11.82□□□□□ -0.52
CDCA3-208ENST00000540683 SORBS3O60504 671 aa11.82□□□□□ -0.52
CDCA3-208ENST00000540683 CYP3A4P08684 503 aa11.82□□□□□ -0.52
CDCA3-208ENST00000540683 IFNAR1P17181 557 aa11.82□□□□□ -0.52
CDCA3-208ENST00000540683 ANAPC15P60006 121 aa11.82□□□□□ -0.52
CDCA3-208ENST00000540683 WDR5P61964 334 aaKnown RBP11.82□□□□□ -0.52
CDCA3-208ENST00000540683 SP4Q02446 784 aa11.82□□□□□ -0.52
CDCA3-208ENST00000540683 APOBRQ0VD83 1088 aa11.82□□□□□ -0.52
CDCA3-208ENST00000540683 FUT2Q10981 343 aa11.82□□□□□ -0.52
CDCA3-208ENST00000540683 SEMA3FQ13275 785 aa11.82□□□□□ -0.52
CDCA3-208ENST00000540683 IER5Q5VY09 327 aa11.82□□□□□ -0.52
CDCA3-208ENST00000540683 MIS18BP1Q6P0N0 1132 aa11.82□□□□□ -0.52
CDCA3-208ENST00000540683 RAB11FIP4Q86YS3 637 aa11.82□□□□□ -0.52
CDCA3-208ENST00000540683 SMAP1Q8IYB5 467 aaPredicted RBP11.82□□□□□ -0.52
CDCA3-208ENST00000540683 NME8Q8N427 588 aa11.82□□□□□ -0.52
CDCA3-208ENST00000540683 TCEANC2Q96MN5 208 aa11.82□□□□□ -0.52
CDCA3-208ENST00000540683 SAMD11Q96NU1 681 aa11.82□□□□□ -0.52
CDCA3-208ENST00000540683 ZSWIM6Q9HCJ5 1215 aa11.82□□□□□ -0.52
CDCA3-208ENST00000540683 LMCD1Q9NZU5 365 aa11.82□□□□□ -0.52
CDCA3-208ENST00000540683 TUBE1Q9UJT0 475 aa11.82□□□□□ -0.52
CDCA3-208ENST00000540683 GRXCR1A8MXD5 290 aa11.81□□□□□ -0.52
CDCA3-208ENST00000540683 DEXIO95424 95 aa11.81□□□□□ -0.52
CDCA3-208ENST00000540683 IGFBP4P22692 258 aa11.81□□□□□ -0.52
CDCA3-208ENST00000540683 ADD1P35611 737 aaKnown RBP11.81□□□□□ -0.52
CDCA3-208ENST00000540683 PBX2P40425 430 aa11.81□□□□□ -0.52
CDCA3-208ENST00000540683 CLK2P49760 499 aaKnown RBP11.81□□□□□ -0.52
CDCA3-208ENST00000540683 STAT5BP51692 787 aa11.81□□□□□ -0.52
CDCA3-208ENST00000540683 SSRP1Q08945 709 aaKnown RBP11.81□□□□□ -0.52
CDCA3-208ENST00000540683 TRIM71Q2Q1W2 868 aaKnown RBP11.81□□□□□ -0.52
CDCA3-208ENST00000540683 FAM26DQ5JW98 314 aa11.81□□□□□ -0.52
CDCA3-208ENST00000540683 LMBR1Q8WVP7 490 aa11.81□□□□□ -0.52
CDCA3-208ENST00000540683 WASF1Q92558 559 aa11.81□□□□□ -0.52
CDCA3-208ENST00000540683 DHX38Q92620 1227 aaKnown RBP11.81□□□□□ -0.52
CDCA3-208ENST00000540683 CTAGE1Q96RT6 745 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms