RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 GAP43P17677 238 aa13.16□□□□□ -0.3
VTN-202ENST00000539746 PLCG1P19174 1290 aa13.16□□□□□ -0.3
VTN-202ENST00000539746 MRPS9P82933 396 aaKnown RBP13.16□□□□□ -0.3
VTN-202ENST00000539746 DHX8Q14562 1220 aaKnown RBP13.16□□□□□ -0.3
VTN-202ENST00000539746 KARSQ15046 597 aaKnown RBP13.16□□□□□ -0.3
VTN-202ENST00000539746 CAMK4Q16566 473 aa13.16□□□□□ -0.3
VTN-202ENST00000539746 ZNF792Q3KQV3 632 aa13.16□□□□□ -0.3
VTN-202ENST00000539746 LONRF3Q496Y0 759 aa13.16□□□□□ -0.3
VTN-202ENST00000539746 TMEM119Q4V9L6 283 aa13.16□□□□□ -0.3
VTN-202ENST00000539746 NT5DC1Q5TFE4 455 aa13.16□□□□□ -0.3
VTN-202ENST00000539746 MFSD14CQ5VZR4 134 aa13.16□□□□□ -0.3
VTN-202ENST00000539746 IQSEC1Q6DN90 963 aa13.16□□□□□ -0.3
VTN-202ENST00000539746 ANKRD20A12PQ8NF67 263 aa13.16□□□□□ -0.3
VTN-202ENST00000539746 RAD54LQ92698 747 aa13.16□□□□□ -0.3
VTN-202ENST00000539746 PAGE5Q96GU1 130 aa13.16□□□□□ -0.3
VTN-202ENST00000539746 ERO1AQ96HE7 468 aa13.16□□□□□ -0.3
VTN-202ENST00000539746 EIF2AK1Q9BQI3 630 aaKnown RBP13.16□□□□□ -0.3
VTN-202ENST00000539746 BPIFA3Q9BQP9 254 aa13.16□□□□□ -0.3
VTN-202ENST00000539746 SPC25Q9HBM1 224 aa13.16□□□□□ -0.3
VTN-202ENST00000539746 ANKEF1Q9NU02 776 aa13.16□□□□□ -0.3
VTN-202ENST00000539746 SEL1LQ9UBV2 794 aa13.16□□□□□ -0.3
VTN-202ENST00000539746 SERTAD1Q9UHV2 236 aa13.16□□□□□ -0.3
VTN-202ENST00000539746 DBR1Q9UK59 544 aaKnown RBP13.16□□□□□ -0.3
VTN-202ENST00000539746 UTRNP46939 3433 aa13.16□□□□□ -0.3
VTN-202ENST00000539746 ADGRA2Q96PE1 1338 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 BICDL2A1A5D9 508 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 ARHGEF35A5YM69 484 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 POTEMA6NI47 508 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 EYA4O95677 639 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 DEKP35659 375 aaKnown RBP13.15□□□□□ -0.3
VTN-202ENST00000539746 NLRP12P59046 1061 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 UBXN2AP68543 259 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 TYRO3Q06418 890 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 GRM1Q13255 1194 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 CRHR2Q13324 411 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 ALCAMQ13740 583 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 E2F4Q16254 413 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 Q3C1V9 767 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 ARMCX2Q7L311 632 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 DHX37Q8IY37 1157 aaKnown RBP13.15□□□□□ -0.3
VTN-202ENST00000539746 C4orf19Q8IY42 314 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 FAM200AQ8TCP9 573 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 SEPT1Q8WYJ6 367 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 CHAMP1Q96JM3 812 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 C7orf25Q9BPX7 421 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 TINF2Q9BSI4 451 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 EFCC1Q9HA90 598 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 C17orf75Q9HAS0 396 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 NRBP2Q9NSY0 501 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 CPA4Q9UI42 421 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 TUBE1Q9UJT0 475 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 ZNF215Q9UL58 517 aaPredicted RBP13.15□□□□□ -0.3
VTN-202ENST00000539746 ODF2LQ9ULJ1 636 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 KIAA1024Q9UPX6 916 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 Q9Y3F1 56 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 COL4A3BPQ9Y5P4 624 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 TCHHQ07283 1943 aa13.15□□□□□ -0.3
VTN-202ENST00000539746 PSMA7O14818 248 aa13.14□□□□□ -0.31
VTN-202ENST00000539746 BACH1O14867 736 aa13.14□□□□□ -0.31
VTN-202ENST00000539746 KPNA6O60684 536 aa13.14□□□□□ -0.31
VTN-202ENST00000539746 GH1P01241 217 aa13.14□□□□□ -0.31
VTN-202ENST00000539746 TPM2P07951 284 aa13.14□□□□□ -0.31
VTN-202ENST00000539746 ARP10275 920 aa13.14□□□□□ -0.31
VTN-202ENST00000539746 ERCC5P28715 1186 aaPredicted RBP13.14□□□□□ -0.31
VTN-202ENST00000539746 ASIC1P78348 528 aa13.14□□□□□ -0.31
VTN-202ENST00000539746 SP3Q02447 781 aa13.14□□□□□ -0.31
VTN-202ENST00000539746 SPIRE1Q08AE8 756 aa13.14□□□□□ -0.31
VTN-202ENST00000539746 SPECC1Q5M775 1068 aa13.14□□□□□ -0.31
VTN-202ENST00000539746 CYP4F22Q6NT55 531 aa13.14□□□□□ -0.31
VTN-202ENST00000539746 PDXDC2PQ6P474 469 aa13.14□□□□□ -0.31
VTN-202ENST00000539746 TPH2Q8IWU9 490 aa13.14□□□□□ -0.31
VTN-202ENST00000539746 ZNF710Q8N1W2 664 aa13.14□□□□□ -0.31
VTN-202ENST00000539746 MCPH1Q8NEM0 835 aa13.14□□□□□ -0.31
VTN-202ENST00000539746 EMID1Q96A84 441 aaPredicted RBP13.14□□□□□ -0.31
VTN-202ENST00000539746 DRC1Q96MC2 740 aa13.14□□□□□ -0.31
VTN-202ENST00000539746 HSD17B14Q9BPX1 270 aa13.14□□□□□ -0.31
VTN-202ENST00000539746 PORCNQ9H237 461 aa13.14□□□□□ -0.31
VTN-202ENST00000539746 COL11A1P12107 1806 aaPredicted RBP13.13□□□□□ -0.31
VTN-202ENST00000539746 SOWAHBA6NEL2 793 aa13.13□□□□□ -0.31
VTN-202ENST00000539746 GOLGA6L6A8MZA4 724 aa13.13□□□□□ -0.31
VTN-202ENST00000539746 CHMP2AO43633 222 aa13.13□□□□□ -0.31
VTN-202ENST00000539746 ZEB2O60315 1214 aa13.13□□□□□ -0.31
VTN-202ENST00000539746 RPN1P04843 607 aaKnown RBP13.13□□□□□ -0.31
VTN-202ENST00000539746 RPLP2P05387 115 aaKnown RBP13.13□□□□□ -0.31
VTN-202ENST00000539746 PLA2G4BP0C869 781 aa13.13□□□□□ -0.31
VTN-202ENST00000539746 TXNP10599 105 aaKnown RBP13.13□□□□□ -0.31
VTN-202ENST00000539746 CNTN2Q02246 1040 aa13.13□□□□□ -0.31
VTN-202ENST00000539746 IL17AQ16552 155 aa13.13□□□□□ -0.31
VTN-202ENST00000539746 XKR3Q5GH77 459 aa13.13□□□□□ -0.31
VTN-202ENST00000539746 MORN1Q5T089 497 aa13.13□□□□□ -0.31
VTN-202ENST00000539746 SEPT14Q6ZU15 432 aa13.13□□□□□ -0.31
VTN-202ENST00000539746 UNC13DQ70J99 1090 aa13.13□□□□□ -0.31
VTN-202ENST00000539746 SH3RF1Q7Z6J0 888 aa13.13□□□□□ -0.31
VTN-202ENST00000539746 CATSPER3Q86XQ3 398 aa13.13□□□□□ -0.31
VTN-202ENST00000539746 CKAP2LQ8IYA6 745 aa13.13□□□□□ -0.31
VTN-202ENST00000539746 SYT2Q8N9I0 419 aaPredicted RBP13.13□□□□□ -0.31
VTN-202ENST00000539746 SPATA20Q8TB22 786 aa13.13□□□□□ -0.31
VTN-202ENST00000539746 NOC3LQ8WTT2 800 aaKnown RBP13.13□□□□□ -0.31
VTN-202ENST00000539746 MAML3Q96JK9 1138 aa13.13□□□□□ -0.31
VTN-202ENST00000539746 LXNQ9BS40 222 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms