RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 TTLL11Q8NHH1 800 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 TAF4BQ92750 862 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 SIK3Q9Y2K2 1263 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 ARAP2Q8WZ64 1704 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 UBR2Q8IWV8 1755 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 MEGF6O75095 1541 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 A0A0G2JS52 829 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 H0YGN5 161 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 PPIP5K2O43314 1243 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 RASSF7Q02833 373 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 ZNF844Q08AG5 666 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 LDLRAD1Q5T700 205 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 IFIT1BQ5T764 474 aaKnown RBP9.88□□□□□ -0.83
SNHG1-209ENST00000538654 TMTC3Q6ZXV5 915 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 SPATA5Q8NB90 893 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 CCDC197Q8NCU1 140 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 RAPGEF5Q92565 580 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 MTMR8Q96EF0 704 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 UCN2Q96RP3 112 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 ZSCAN10Q96SZ4 725 aaPredicted RBP9.88□□□□□ -0.83
SNHG1-209ENST00000538654 POLD4Q9HCU8 107 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 SPATS2LQ9NUQ6 558 aaKnown RBP9.88□□□□□ -0.83
SNHG1-209ENST00000538654 ANAPC4Q9UJX5 808 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 INTUQ9ULD6 942 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 NFS1Q9Y697 457 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 ZSCAN5CA6NGD5 496 aaPredicted RBP9.88□□□□□ -0.83
SNHG1-209ENST00000538654 CCT8L1PA6NM43 557 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 LAD1O00515 517 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 TRIM37O94972 964 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 LDHCP07864 332 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 PCP11498 1178 aaKnown RBP9.88□□□□□ -0.83
SNHG1-209ENST00000538654 PHKA1P46020 1223 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 AMPD3Q01432 767 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 ITIH4Q14624 930 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 NAB2Q15742 525 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 MAN2A1Q16706 1144 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 QPCTQ16769 361 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 ASTE1Q2TB18 679 aaPredicted RBP9.88□□□□□ -0.83
SNHG1-209ENST00000538654 SLC9C1Q4G0N8 1177 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 SH3D19Q5HYK7 790 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 MEI1Q5TIA1 1274 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 CNNM4Q6P4Q7 775 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 RRAGAQ7L523 313 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 VGLL2Q8N8G2 317 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 C4orf32Q8N8J7 132 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 USP38Q8NB14 1042 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 SYN2Q92777 582 aaPredicted RBP9.88□□□□□ -0.83
SNHG1-209ENST00000538654 CHMP6Q96FZ7 201 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 INPP4AQ96PE3 977 aaPredicted RBP9.88□□□□□ -0.83
SNHG1-209ENST00000538654 NDST4Q9H3R1 872 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 HOMER3Q9NSC5 361 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 DLEC1Q9Y238 1755 aa9.88□□□□□ -0.83
SNHG1-209ENST00000538654 LRRC53A6NM62 1247 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 RAD51CO43502 376 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 SCG2P13521 617 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 EIF3BP55884 814 aaKnown RBP9.87□□□□□ -0.83
SNHG1-209ENST00000538654 MAP2K5Q13163 448 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 LRRC41Q15345 812 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 PUM3Q15397 648 aaKnown RBP9.87□□□□□ -0.83
SNHG1-209ENST00000538654 PPP1R7Q15435 360 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 SPDYCQ5MJ68 293 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 NAIF1Q69YI7 327 aaPredicted RBP9.87□□□□□ -0.83
SNHG1-209ENST00000538654 CACNA2D4Q7Z3S7 1137 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 PODNQ7Z5L7 613 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 TTC30AQ86WT1 665 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 ENAHQ8N8S7 591 aaPredicted RBP9.87□□□□□ -0.83
SNHG1-209ENST00000538654 LPIN2Q92539 896 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 MMRN2Q9H8L6 949 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 PPCSQ9HAB8 311 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 FAM207AQ9NSI2 230 aaPredicted RBP9.87□□□□□ -0.83
SNHG1-209ENST00000538654 BAIAP2L1Q9UHR4 511 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 TMEM59LQ9UK28 342 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 PCDHGC5Q9Y5F6 944 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 SPATA31A3Q5VYP0 1347 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 PLCH1Q4KWH8 1693 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 RREB1Q92766 1687 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 GOLGA6L10A0A0M3HER8 536 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 CYP27B1O15528 508 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 BUB1O43683 1085 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 PALMO75781 387 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 PLEKHA8P1O95397 391 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 RPSAP08865 295 aaKnown RBP9.87□□□□□ -0.83
SNHG1-209ENST00000538654 DRD4P21917 467 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 ITGA6P23229 1130 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 GCKP35557 465 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 BYSLQ13895 437 aaKnown RBP9.87□□□□□ -0.83
SNHG1-209ENST00000538654 HIBCHQ6NVY1 386 aaPredicted RBP9.87□□□□□ -0.83
SNHG1-209ENST00000538654 PDXDC1Q6P996 788 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 CCDC63Q8NA47 563 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 PBKQ96KB5 322 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 SH3GL3Q99963 347 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 MOV10L1Q9BXT6 1211 aaKnown RBP9.87□□□□□ -0.83
SNHG1-209ENST00000538654 SALL4Q9UJQ4 1053 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 C15orf41Q9Y2V0 281 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 MYH3P11055 1940 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 CNTNAP5Q8WYK1 1306 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 MYH1P12882 1939 aa9.87□□□□□ -0.83
SNHG1-209ENST00000538654 ASAP2O43150 1006 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 SERPING1P05155 500 aa9.86□□□□□ -0.83
SNHG1-209ENST00000538654 SLC1A4P43007 532 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms