RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 PGRP06401 933 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 VIL1P09327 827 aaKnown RBP5.18□□□□□ -1.58
SNHG1-208ENST00000538266 ATP5JP18859 108 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 YY1P25490 414 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 MCM4P33991 863 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 NTF4P34130 210 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 ADMP35318 185 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 MCAMP43121 646 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 GMPSP49915 693 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-208ENST00000538266 RBM5P52756 815 aaKnown RBP eCLIP5.18□□□□□ -1.58
SNHG1-208ENST00000538266 PDE1AP54750 535 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 FKBP1AP62942 108 aaKnown RBP5.18□□□□□ -1.58
SNHG1-208ENST00000538266 PDE4BQ07343 736 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 APOBRQ0VD83 1088 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 TTF1Q15361 905 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-208ENST00000538266 LRRFIP1Q32MZ4 808 aaKnown RBP5.18□□□□□ -1.58
SNHG1-208ENST00000538266 SEZ6Q53EL9 994 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 DACT2Q5SW24 774 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 TSHZ3Q63HK5 1081 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 DZIP1Q86YF9 867 aaKnown RBP5.18□□□□□ -1.58
SNHG1-208ENST00000538266 HID1Q8IV36 788 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 GIMAP7Q8NHV1 300 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.18□□□□□ -1.58
SNHG1-208ENST00000538266 EAF1Q96JC9 268 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-208ENST00000538266 NT5C1AQ9BXI3 368 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.18□□□□□ -1.58
SNHG1-208ENST00000538266 BOLA2Q9H3K6 86 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 UBP1Q9NZI7 540 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 RAI14Q9P0K7 980 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 HMG20BQ9P0W2 317 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 HACL1Q9UJ83 578 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 SUGT1Q9Y2Z0 365 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 CORINQ9Y5Q5 1042 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 COL1A1P02452 1464 aaPredicted RBP5.18□□□□□ -1.58
SNHG1-208ENST00000538266 AOX1Q06278 1338 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 FAM205AQ6ZU69 1335 aa5.18□□□□□ -1.58
SNHG1-208ENST00000538266 MAST2Q6P0Q8 1798 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 WDR64B1ANS9 1081 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 MYO1BO43795 1136 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 ADAM23O75077 832 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 VEGFAP15692 232 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-208ENST00000538266 PLCG1P19174 1290 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 ERCC5P28715 1186 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-208ENST00000538266 CRKP46108 304 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 MMP14P50281 582 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 GSTO1P78417 241 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 MAP3K12Q12852 859 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 OGFOD3Q6PK18 319 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 REC114Q7Z4M0 266 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 UBE3DQ7Z6J8 389 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 ZAR1Q86SH2 424 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 C16orf71Q8IYS4 520 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-208ENST00000538266 SHISA5Q8N114 240 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 SHKBP1Q8TBC3 707 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 OTUD7AQ8TE49 926 aaPredicted RBP5.17□□□□□ -1.58
SNHG1-208ENST00000538266 DPF2Q92785 391 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 NKD1Q969G9 470 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 TEKT1Q969V4 418 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 HAUS7Q99871 368 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 NOL10Q9BSC4 688 aaKnown RBP5.17□□□□□ -1.58
SNHG1-208ENST00000538266 MXD3Q9BW11 206 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 FBRSQ9HAH7 460 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 BRMS1Q9HCU9 246 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 PAG1Q9NWQ8 432 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 GPRC5DQ9NZD1 345 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 STAP2Q9UGK3 403 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 CNOT7Q9UIV1 285 aaKnown RBP5.17□□□□□ -1.58
SNHG1-208ENST00000538266 SCN4AP35499 1836 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 SALL1Q9NSC2 1324 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 WDR90Q96KV7 1748 aa5.17□□□□□ -1.58
SNHG1-208ENST00000538266 IGSF3O75054 1194 aa5.16□□□□□ -1.58
SNHG1-208ENST00000538266 F13BP05160 661 aa5.16□□□□□ -1.58
SNHG1-208ENST00000538266 LDHCP07864 332 aa5.16□□□□□ -1.58
SNHG1-208ENST00000538266 PRDX5P30044 214 aa5.16□□□□□ -1.58
SNHG1-208ENST00000538266 EPHX2P34913 555 aa5.16□□□□□ -1.58
SNHG1-208ENST00000538266 RGS3P49796 1198 aa5.16□□□□□ -1.58
SNHG1-208ENST00000538266 MECOMQ03112 1051 aa5.16□□□□□ -1.58
SNHG1-208ENST00000538266 CDK5R2Q13319 367 aa5.16□□□□□ -1.58
SNHG1-208ENST00000538266 DLGAP5Q15398 846 aa5.16□□□□□ -1.58
SNHG1-208ENST00000538266 NKG7Q16617 165 aa5.16□□□□□ -1.58
SNHG1-208ENST00000538266 NAA16Q6N069 864 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-208ENST00000538266 ZSCAN25Q6NSZ9 544 aa5.16□□□□□ -1.58
SNHG1-208ENST00000538266 TMED8Q6PL24 325 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-208ENST00000538266 PNMA8AQ86V59 439 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-208ENST00000538266 CNTROBQ8N137 903 aa5.16□□□□□ -1.58
SNHG1-208ENST00000538266 CERS5Q8N5B7 392 aa5.16□□□□□ -1.58
SNHG1-208ENST00000538266 PI4K2BQ8TCG2 481 aa5.16□□□□□ -1.58
SNHG1-208ENST00000538266 EVI5LQ96CN4 794 aa5.16□□□□□ -1.58
SNHG1-208ENST00000538266 PSMG3-AS1Q96PY0 264 aa5.16□□□□□ -1.58
SNHG1-208ENST00000538266 FSD1Q9BTV5 496 aa5.16□□□□□ -1.58
SNHG1-208ENST00000538266 TGIF2Q9GZN2 237 aa5.16□□□□□ -1.58
SNHG1-208ENST00000538266 MYOZ2Q9NPC6 264 aa5.16□□□□□ -1.58
SNHG1-208ENST00000538266 ADARB2Q9NS39 739 aaKnown RBP5.16□□□□□ -1.58
SNHG1-208ENST00000538266 TMOD2Q9NZR1 351 aa5.16□□□□□ -1.58
SNHG1-208ENST00000538266 POLR3KQ9Y2Y1 108 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-208ENST00000538266 AKAP11Q9UKA4 1901 aa5.16□□□□□ -1.58
SNHG1-208ENST00000538266 ZNF646O15015 1829 aaPredicted RBP5.16□□□□□ -1.58
SNHG1-208ENST00000538266 FAM170BA6NMN3 283 aa5.15□□□□□ -1.59
SNHG1-208ENST00000538266 LRIG2O94898 1065 aa5.15□□□□□ -1.59
SNHG1-208ENST00000538266 MAP4K4O95819 1239 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms