RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 PAK2Q13177 524 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 RRP12Q5JTH9 1297 aaKnown RBP8.6□□□□□ -1.03
CPSF7-216ENST00000536548 PDXDC2PQ6P474 469 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 KDM7AQ6ZMT4 941 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 CCDC50Q8IVM0 306 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 IFT20Q8IY31 132 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 SMYD4Q8IYR2 804 aaPredicted RBP8.6□□□□□ -1.03
CPSF7-216ENST00000536548 ADSSL1Q8N142 457 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 ARFGAP2Q8N6H7 521 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 PRPF38AQ8NAV1 312 aaKnown RBP8.6□□□□□ -1.03
CPSF7-216ENST00000536548 USP38Q8NB14 1042 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 C3orf20Q8ND61 904 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 SLAIN1Q8ND83 568 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 ZNF507Q8TCN5 953 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 OXER1Q8TDS5 423 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 NUP133Q8WUM0 1156 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.6□□□□□ -1.03
CPSF7-216ENST00000536548 DHTKD1Q96HY7 919 aaPredicted RBP8.6□□□□□ -1.03
CPSF7-216ENST00000536548 CUEDC2Q9H467 287 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 EPB41L4AQ9HCS5 686 aaPredicted RBP8.6□□□□□ -1.03
CPSF7-216ENST00000536548 JADE2Q9NQC1 790 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 HDAC6Q9UBN7 1215 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 DENND2AQ9ULE3 1009 aa8.6□□□□□ -1.03
CPSF7-216ENST00000536548 MYO5AQ9Y4I1 1855 aaKnown RBP8.6□□□□□ -1.03
CPSF7-216ENST00000536548 GRIN2DO15399 1336 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 MROH5Q6ZUA9 1318 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 MYH7P12883 1935 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 GOLGA6L7A0A1B0GV03 622 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 SPDYE2BA6NHP3 402 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 GSG1L2A8MUP6 293 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 PES1O00541 588 aaKnown RBP8.59□□□□□ -1.03
CPSF7-216ENST00000536548 ENC1O14682 589 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 IRF6O14896 467 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 MEFVO15553 781 aaPredicted RBP8.59□□□□□ -1.03
CPSF7-216ENST00000536548 PDE8BO95263 885 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 ABL1P00519 1130 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 SPDYE6P0CI01 402 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 TRIM21P19474 475 aaKnown RBP8.59□□□□□ -1.03
CPSF7-216ENST00000536548 CALML3P27482 149 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 CDC25AP30304 524 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 STAT6P42226 847 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 MMP14P50281 582 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 C2orf54Q08AI8 447 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 PUM3Q15397 648 aaKnown RBP8.59□□□□□ -1.03
CPSF7-216ENST00000536548 CFAP58Q5T655 872 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 EMC10Q5UCC4 262 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 PI16Q6UXB8 463 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 CD302Q8IX05 232 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 CERS5Q8N5B7 392 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 HELBQ8NG08 1087 aaPredicted RBP8.59□□□□□ -1.03
CPSF7-216ENST00000536548 TTLL11Q8NHH1 800 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.59□□□□□ -1.03
CPSF7-216ENST00000536548 LPIN2Q92539 896 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 CCDC42Q96M95 316 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 PCMTD1Q96MG8 357 aaPredicted RBP8.59□□□□□ -1.03
CPSF7-216ENST00000536548 PLEKHA4Q9H4M7 779 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 ACTR5Q9H9F9 607 aaPredicted RBP8.59□□□□□ -1.03
CPSF7-216ENST00000536548 NHEJ1Q9H9Q4 299 aaPredicted RBP8.59□□□□□ -1.03
CPSF7-216ENST00000536548 LUC7LQ9NQ29 371 aaKnown RBP8.59□□□□□ -1.03
CPSF7-216ENST00000536548 ANAPC4Q9UJX5 808 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 SLC4A4Q9Y6R1 1079 aa8.59□□□□□ -1.03
CPSF7-216ENST00000536548 ADGRA2Q96PE1 1338 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 DOCK3Q8IZD9 2030 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 NCOR1O75376 2440 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 HMGB1P1B2RPK0 211 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-216ENST00000536548 ANKRD65E5RJM6 399 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 RNF225M0QZC1 329 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-216ENST00000536548 CHUKO15111 745 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 SRGAP2O75044 1071 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 FGFR1OPO95684 399 aaKnown RBP8.58□□□□□ -1.04
CPSF7-216ENST00000536548 CCDC172P0C7W6 258 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 CETPP11597 493 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 FOSL2P15408 326 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 ITGA6P23229 1130 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 PRCPP42785 496 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 FLT3LGP49771 235 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 NT5C2P49902 561 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 PTGDRQ13258 359 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 ZNF174Q15697 407 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 CCDC96Q2M329 555 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 C8orf74Q6P047 294 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 WDR59Q6PJI9 974 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 TAX1BP1Q86VP1 789 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 MREGQ8N565 214 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 MAGEB6Q8N7X4 407 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 GPATCH11Q8N954 259 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 SPATA5Q8NB90 893 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 MTMR14Q8NCE2 650 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 SPATA4Q8NEY3 305 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 GIMAP7Q8NHV1 300 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 RIN2Q8WYP3 895 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-216ENST00000536548 TNFRSF25Q93038 417 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 TEPSINQ96N21 525 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 COA1Q9GZY4 146 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 EPN3Q9H201 632 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 BLZF1Q9H2G9 400 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 TTYH1Q9H313 450 aaPredicted RBP8.58□□□□□ -1.04
CPSF7-216ENST00000536548 CXorf56Q9H5V9 222 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 ARMT1Q9H993 441 aa8.58□□□□□ -1.04
CPSF7-216ENST00000536548 VPS54Q9P1Q0 977 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms