RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 CAPN12Q6ZSI9 719 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 KRT26Q7Z3Y9 468 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 PPP1R42Q7Z4L9 355 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 TTC30AQ86WT1 665 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 DZIP3Q86Y13 1208 aaKnown RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 FAM133AQ8N9E0 248 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 MLKLQ8NB16 471 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 RHPN1Q8TCX5 695 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 WHAMMQ8TF30 809 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 OPTNQ96CV9 577 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 ATP6V1G3Q96LB4 118 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 AGBL1Q96MI9 1066 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 NUP88Q99567 741 aaPredicted RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 CCDC8Q9H0W5 538 aaPredicted RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 BOLA2Q9H3K6 86 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 ECT2Q9H8V3 914 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 MLXIPQ9HAP2 919 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 TLR7Q9NYK1 1049 aaKnown RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 STIM2Q9P246 746 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 RABL2BQ9UNT1 228 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 SPTLC1O15269 473 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 TRAPPC3O43617 180 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 NQO1P15559 274 aaKnown RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 GM2AP17900 193 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 FLT3P36888 993 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 TUFMP49411 452 aaKnown RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 IFFO1Q0D2I5 559 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 LAPTM4AQ15012 233 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 CERKLQ49MI3 558 aaPredicted RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 HSP90AB4PQ58FF6 505 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 HAUS3Q68CZ6 603 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 CEP128Q6ZU80 1094 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 LCA5Q86VQ0 697 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 DNAJC5GQ8N7S2 189 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 TTC8Q8TAM2 541 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 RBM12Q9NTZ6 932 aaKnown RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 PAG1Q9NWQ8 432 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 CEP131Q9UPN4 1083 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 SPO11Q9Y5K1 396 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 MYH7P12883 1935 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 CARNS1A5YM72 827 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 SOWAHBA6NEL2 793 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 ERVV-2B6SEH9 535 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 FDPSP14324 419 aaKnown RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 DESP17661 470 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 RXRAP19793 462 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 DRD4P21917 467 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 VARSP26640 1264 aaKnown RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 GALK1P51570 392 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 MAGOHP61326 146 aaKnown RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 NCALDP61601 193 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 ATP8B2P98198 1209 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 RASSF7Q02833 373 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 TTLL12Q14166 644 aaPredicted RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 UBAP2Q5T6F2 1119 aaKnown RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 RASIP1Q5U651 963 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 OR52E8Q6IFG1 317 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 PPP4R3AQ6IN85 833 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 SPATS2Q86XZ4 545 aaKnown RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 MAGOHBQ96A72 148 aaKnown RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 KLRG1Q96E93 195 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 DCAF5Q96JK2 942 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 PANX2Q96RD6 677 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 DUSP9Q99956 384 aaKnown RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 PAGR1Q9BTK6 254 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 OXCT2Q9BYC2 517 aaPredicted RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 TRIM7Q9C029 511 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 KCNMB3Q9NPA1 279 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 MRGBPQ9NV56 204 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 TAB2Q9NYJ8 693 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 HSFX1Q9UBD0 423 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 CCNL1Q9UK58 526 aaPredicted RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 MAN1B1Q9UKM7 699 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 EFR3BQ9Y2G0 817 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 TMEM221A6NGB7 291 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 RARAP10276 462 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 MYCLP1P12525 358 aaPredicted RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 YBX3P16989 372 aaKnown RBP eCLIP4.07□□□□□ -1.76
MCF2-210ENST00000536274 TATP17735 454 aaPredicted RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 KRT9P35527 623 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 PPP1R2P41236 205 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 AFMP43652 599 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 KLK7P49862 253 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 CCR3P51677 355 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 PRSS12P56730 875 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 KCTD21Q4G0X4 260 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 GKAP1Q5VSY0 366 aaPredicted RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 PPP1R2P3Q6NXS1 205 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 BICDL1Q6ZP65 573 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 RFX8Q6ZV50 586 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 STOX1Q6ZVD7 989 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 NCCRP1Q6ZVX7 275 aaPredicted RBP4.07□□□□□ -1.76
MCF2-210ENST00000536274 USP49Q70CQ1 688 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 LRRC34Q8IZ02 419 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 IQCKQ8N0W5 287 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 SPATA4Q8NEY3 305 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 CASKIN2Q8WXE0 1202 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 TMEM237Q96Q45 408 aa4.07□□□□□ -1.76
MCF2-210ENST00000536274 PLVAPQ9BX97 442 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms