RNA–Protein interactions for RNA: ENST00000535926.2

CHPF-203, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 2,634 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-203ENST00000535926 CCDC65Q8IXS2 484 aa20.58■□□□□ 0.89
CHPF-203ENST00000535926 NGLY1Q96IV0 654 aa20.58■□□□□ 0.89
CHPF-203ENST00000535926 ZIM3Q96PE6 472 aa20.58■□□□□ 0.89
CHPF-203ENST00000535926 NT5C3AQ9H0P0 336 aa20.58■□□□□ 0.89
CHPF-203ENST00000535926 EPB41L5Q9HCM4 733 aa20.58■□□□□ 0.89
CHPF-203ENST00000535926 SERPINB13Q9UIV8 391 aa20.58■□□□□ 0.89
CHPF-203ENST00000535926 MED24O75448 989 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 CASP5P51878 434 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 CORO7P57737 925 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 PPFIA1Q13136 1202 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 GLE1Q53GS7 698 aaKnown RBP20.57■□□□□ 0.88
CHPF-203ENST00000535926 DNAJC21Q5F1R6 531 aaKnown RBP20.57■□□□□ 0.88
CHPF-203ENST00000535926 MEI1Q5TIA1 1274 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 MXD3Q9BW11 206 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 CAPS2Q9BXY5 557 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 GANQ9H2C0 597 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 PODXL2Q9NZ53 605 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 AIPL1Q9NZN9 384 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 TSKSQ9UJT2 592 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 PCDHGC5Q9Y5F6 944 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 GOLGA8KD6RF30 607 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 ACTN1P12814 892 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 ALS2CLQ60I27 953 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 CERS5Q8N5B7 392 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 RIMBP2O15034 1052 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 GNA14O95837 355 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 EPB41P11171 864 aaKnown RBP20.57■□□□□ 0.88
CHPF-203ENST00000535926 GCFC2P16383 781 aaKnown RBP20.57■□□□□ 0.88
CHPF-203ENST00000535926 GUCY2DQ02846 1103 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 KLHL30Q0D2K2 578 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 KCNH2Q12809 1159 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 DNAAF5Q86Y56 855 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 IFT81Q8WYA0 676 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 RBM17Q96I25 401 aaKnown RBP20.57■□□□□ 0.88
CHPF-203ENST00000535926 ZHX3Q9H4I2 956 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 RNF14Q9UBS8 474 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 GRIN2DO15399 1336 aa20.57■□□□□ 0.88
CHPF-203ENST00000535926 OPA1O60313 960 aa20.56■□□□□ 0.88
CHPF-203ENST00000535926 HEXIM1O94992 359 aaKnown RBP20.56■□□□□ 0.88
CHPF-203ENST00000535926 KRT14P02533 472 aa20.56■□□□□ 0.88
CHPF-203ENST00000535926 DPY19L2P1Q6NXN4 242 aa20.56■□□□□ 0.88
CHPF-203ENST00000535926 IFT20Q8IY31 132 aa20.56■□□□□ 0.88
CHPF-203ENST00000535926 KRT12Q99456 494 aa20.56■□□□□ 0.88
CHPF-203ENST00000535926 KCNMB3Q9NPA1 279 aa20.56■□□□□ 0.88
CHPF-203ENST00000535926 LRRC4BQ9NT99 713 aa20.56■□□□□ 0.88
CHPF-203ENST00000535926 BTAF1O14981 1849 aa20.56■□□□□ 0.88
CHPF-203ENST00000535926 KDM3AQ9Y4C1 1321 aa20.56■□□□□ 0.88
CHPF-203ENST00000535926 GRID2IPA4D2P6 1211 aa20.56■□□□□ 0.88
CHPF-203ENST00000535926 MPHOSPH10O00566 681 aaKnown RBP20.56■□□□□ 0.88
CHPF-203ENST00000535926 SERPINB2P05120 415 aa20.56■□□□□ 0.88
CHPF-203ENST00000535926 MAGEA9P43362 315 aa20.56■□□□□ 0.88
CHPF-203ENST00000535926 SLC12A3P55017 1021 aa20.56■□□□□ 0.88
CHPF-203ENST00000535926 PSMC6P62333 389 aa20.56■□□□□ 0.88
CHPF-203ENST00000535926 ZC3H3Q8IXZ2 948 aaKnown RBP20.56■□□□□ 0.88
CHPF-203ENST00000535926 INPP4AQ96PE3 977 aaPredicted RBP20.56■□□□□ 0.88
CHPF-203ENST00000535926 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.55■□□□□ 0.88
CHPF-203ENST00000535926 POTEFA5A3E0 1075 aa20.55■□□□□ 0.88
CHPF-203ENST00000535926 HSF2BPO75031 334 aa20.55■□□□□ 0.88
CHPF-203ENST00000535926 BBOX1O75936 387 aa20.55■□□□□ 0.88
CHPF-203ENST00000535926 POTEIP0CG38 1075 aa20.55■□□□□ 0.88
CHPF-203ENST00000535926 SLC9A1P19634 815 aa20.55■□□□□ 0.88
CHPF-203ENST00000535926 CCT5P48643 541 aa20.55■□□□□ 0.88
CHPF-203ENST00000535926 POTEGQ6S5H5 508 aa20.55■□□□□ 0.88
CHPF-203ENST00000535926 POTEEQ6S8J3 1075 aa20.55■□□□□ 0.88
CHPF-203ENST00000535926 IQCKQ8N0W5 287 aa20.55■□□□□ 0.88
CHPF-203ENST00000535926 P2RX7Q99572 595 aaKnown RBP20.55■□□□□ 0.88
CHPF-203ENST00000535926 USP40Q9NVE5 1235 aa20.55■□□□□ 0.88
CHPF-203ENST00000535926 NHSQ6T4R5 1651 aa20.55■□□□□ 0.88
CHPF-203ENST00000535926 GNGT1P63211 74 aa20.55■□□□□ 0.88
CHPF-203ENST00000535926 PTK2Q05397 1052 aa20.55■□□□□ 0.88
CHPF-203ENST00000535926 SHROOM1Q2M3G4 852 aaPredicted RBP20.55■□□□□ 0.88
CHPF-203ENST00000535926 GPATCH4Q5T3I0 446 aaKnown RBP20.55■□□□□ 0.88
CHPF-203ENST00000535926 KCTD16Q68DU8 428 aa20.55■□□□□ 0.88
CHPF-203ENST00000535926 IRF2BP2Q7Z5L9 587 aa20.55■□□□□ 0.88
CHPF-203ENST00000535926 SH2D3CQ8N5H7 860 aa20.55■□□□□ 0.88
CHPF-203ENST00000535926 FRMD3A2A2Y4 597 aa20.54■□□□□ 0.88
CHPF-203ENST00000535926 HOXD13P35453 343 aa20.54■□□□□ 0.88
CHPF-203ENST00000535926 CASKIN2Q8WXE0 1202 aa20.54■□□□□ 0.88
CHPF-203ENST00000535926 PIK3R5Q8WYR1 880 aa20.54■□□□□ 0.88
CHPF-203ENST00000535926 CCDC43Q96MW1 224 aaKnown RBP20.54■□□□□ 0.88
CHPF-203ENST00000535926 GOLPH3Q9H4A6 298 aa20.54■□□□□ 0.88
CHPF-203ENST00000535926 ZNF233A6NK53 670 aa20.54■□□□□ 0.88
CHPF-203ENST00000535926 EIF3HO15372 352 aaKnown RBP eCLIP20.54■□□□□ 0.88
CHPF-203ENST00000535926 GYS1P13807 737 aa20.54■□□□□ 0.88
CHPF-203ENST00000535926 NR2F2P24468 414 aa20.54■□□□□ 0.88
CHPF-203ENST00000535926 SCNN1DP51172 638 aa20.54■□□□□ 0.88
CHPF-203ENST00000535926 ASIC2Q16515 512 aa20.54■□□□□ 0.88
CHPF-203ENST00000535926 QRICH1Q2TAL8 776 aa20.54■□□□□ 0.88
CHPF-203ENST00000535926 ZNF571Q7Z3V5 609 aaPredicted RBP20.54■□□□□ 0.88
CHPF-203ENST00000535926 MYH7BA7E2Y1 1941 aa20.53■□□□□ 0.88
CHPF-203ENST00000535926 MEIS1O00470 390 aa20.53■□□□□ 0.88
CHPF-203ENST00000535926 RAD21O60216 631 aa20.53■□□□□ 0.88
CHPF-203ENST00000535926 GUCY2FP51841 1108 aa20.53■□□□□ 0.88
CHPF-203ENST00000535926 NNTQ13423 1086 aa20.53■□□□□ 0.88
CHPF-203ENST00000535926 CATSPER3Q86XQ3 398 aa20.53■□□□□ 0.88
CHPF-203ENST00000535926 BCAS4Q8TDM0 211 aa20.53■□□□□ 0.88
CHPF-203ENST00000535926 DHX36Q9H2U1 1008 aaKnown RBP20.53■□□□□ 0.88
CHPF-203ENST00000535926 BCAS3Q9H6U6 928 aa20.53■□□□□ 0.88
CHPF-203ENST00000535926 POLD4Q9HCU8 107 aa20.53■□□□□ 0.88
CHPF-203ENST00000535926 LUC7LQ9NQ29 371 aaKnown RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms