RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 PSMD2Q13200 908 aa19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 ZNF589Q86UQ0 364 aaPredicted RBP19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 TTLL6Q8N841 843 aa19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 CCHCR1Q8TD31 782 aa19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 ZBED2Q9BTP6 218 aa19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 PNMA6FA0A0J9YX94 578 aa19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 RRAGDQ9NQL2 400 aaPredicted RBP19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 GSTA4O15217 222 aa19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 SLFN14P0C7P3 912 aa19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 IFNAR2P48551 515 aa19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 TMED2Q15363 201 aa19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 TMTC3Q6ZXV5 915 aa19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 FGD4Q96M96 766 aa19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 ZNF341Q9BYN7 854 aa19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 COA1Q9GZY4 146 aa19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 SPECC1L-ADORA2AF8WAN1 911 aa19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 SOX5P35711 763 aa19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 FAM49AQ9H0Q0 323 aaPredicted RBP19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 CDC23Q9UJX2 597 aa19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 FIS1Q9Y3D6 152 aa19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 PLTPP55058 493 aa19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 MECOMQ03112 1051 aa19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 STAG1Q8WVM7 1258 aa19.62■□□□□ 0.73
SFSWAP-203ENST00000535236 LRRD1A4D1F6 860 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 NFKBIAP25963 317 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 HOXA13P31271 388 aaPredicted RBP19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 KIF23Q02241 960 aaPredicted RBP19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 KRT33BQ14525 404 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 SPOPLQ6IQ16 392 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 EPS15L1Q9UBC2 864 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 CFAP43Q8NDM7 1665 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 TCP11X2Q5H9J9 407 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 SLFN12LQ6IEE8 588 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 RNF207Q6ZRF8 634 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 ORC6Q9Y5N6 252 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 K7ERI5 159 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 EVI5O60447 810 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 CIITAP33076 1130 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 PHEXP78562 749 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 RASEFQ8IZ41 740 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 PUS7LQ9H0K6 701 aaKnown RBP19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 SLITRK6Q9H5Y7 841 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 OLA1Q9NTK5 396 aaKnown RBP19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 TTI1O43156 1089 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 CDK8P49336 464 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 ADCY1Q08828 1119 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 C1orf228Q6PIY5 440 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 TCP11Q8WWU5 503 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 RWDD2AQ9UIY3 292 aa19.61■□□□□ 0.73
SFSWAP-203ENST00000535236 CTTNQ14247 550 aaKnown RBP19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 KCTD16Q68DU8 428 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 CATSPER4Q7RTX7 472 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 PCGF5Q86SE9 256 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 MAN1B1Q9UKM7 699 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 MT-ND3P03897 115 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 GRAMD1CQ8IYS0 662 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 NDUFAF2Q8N183 169 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 SRP68Q9UHB9 627 aaKnown RBP19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 NR5A1Q13285 461 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 MASTLQ96GX5 879 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 EPB41L5Q9HCM4 733 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 IKBKBO14920 756 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 PMLP29590 882 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 HOXA7P31268 230 aaPredicted RBP19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 PPARGP37231 505 aaPredicted RBP19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 ANKRD20A4Q4UJ75 823 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 ANKRD20A8PQ5CZ79 823 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 ANKRD20A2Q5SQ80 823 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 ANKRD20A1Q5TYW2 823 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 PI16Q6UXB8 463 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 PPP1R13BQ96KQ4 1090 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 HSPA6P17066 643 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 CDC25BP30305 580 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 C10orf76Q5T2E6 689 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 OR6B3Q8NGW1 331 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 CFAP36Q96G28 342 aa19.6■□□□□ 0.73
SFSWAP-203ENST00000535236 CLTAP09496 248 aa19.59■□□□□ 0.73
SFSWAP-203ENST00000535236 HSPA8P11142 646 aaKnown RBP19.59■□□□□ 0.73
SFSWAP-203ENST00000535236 NFX1Q12986 1120 aaKnown RBP19.59■□□□□ 0.73
SFSWAP-203ENST00000535236 ATP8A1Q9Y2Q0 1164 aa19.59■□□□□ 0.73
SFSWAP-203ENST00000535236 GOLGA8IPA6NC78 632 aa19.59■□□□□ 0.73
SFSWAP-203ENST00000535236 GOLGA8JA6NMD2 632 aa19.59■□□□□ 0.73
SFSWAP-203ENST00000535236 ZNF18P17022 549 aa19.59■□□□□ 0.73
SFSWAP-203ENST00000535236 PLCG1P19174 1290 aa19.59■□□□□ 0.73
SFSWAP-203ENST00000535236 C2orf69Q8N8R5 385 aa19.59■□□□□ 0.73
SFSWAP-203ENST00000535236 PPWD1Q96BP3 646 aaKnown RBP19.59■□□□□ 0.73
SFSWAP-203ENST00000535236 THAP9Q9H5L6 903 aa19.59■□□□□ 0.73
SFSWAP-203ENST00000535236 SNAP25P60880 206 aa19.59■□□□□ 0.73
SFSWAP-203ENST00000535236 TMEM179Q6ZVK1 233 aa19.59■□□□□ 0.73
SFSWAP-203ENST00000535236 PBKQ96KB5 322 aa19.59■□□□□ 0.73
SFSWAP-203ENST00000535236 NPHP4O75161 1426 aaPredicted RBP19.59■□□□□ 0.73
SFSWAP-203ENST00000535236 CYP2D7A0A087X1C5 515 aa19.59■□□□□ 0.73
SFSWAP-203ENST00000535236 PKP1Q13835 747 aa19.59■□□□□ 0.73
SFSWAP-203ENST00000535236 LLGL1Q15334 1064 aa19.59■□□□□ 0.73
SFSWAP-203ENST00000535236 THEM5Q8N1Q8 247 aa19.59■□□□□ 0.73
SFSWAP-203ENST00000535236 GPT2Q8TD30 523 aa19.59■□□□□ 0.73
SFSWAP-203ENST00000535236 POLIQ9UNA4 740 aa19.59■□□□□ 0.73
SFSWAP-203ENST00000535236 AATKQ6ZMQ8 1374 aa19.58■□□□□ 0.73
SFSWAP-203ENST00000535236 PRAMEF22A3QJZ6 481 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms