RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 RILPL1Q5EBL4 403 aa14.84□□□□□ -0.03
TMEM258-202ENST00000535042 UTP14CQ5TAP6 766 aaKnown RBP14.84□□□□□ -0.03
TMEM258-202ENST00000535042 FOXD4L5Q5VV16 416 aaPredicted RBP14.84□□□□□ -0.03
TMEM258-202ENST00000535042 SLC39A5Q6ZMH5 540 aa14.84□□□□□ -0.03
TMEM258-202ENST00000535042 BRAPQ7Z569 592 aa14.84□□□□□ -0.03
TMEM258-202ENST00000535042 TRIM50Q86XT4 487 aa14.84□□□□□ -0.03
TMEM258-202ENST00000535042 FOXD4L4Q8WXT5 416 aaPredicted RBP14.84□□□□□ -0.03
TMEM258-202ENST00000535042 FAM20AQ96MK3 541 aa14.84□□□□□ -0.03
TMEM258-202ENST00000535042 GLT1D1Q96MS3 346 aa14.84□□□□□ -0.03
TMEM258-202ENST00000535042 TEKT3Q9BXF9 490 aa14.84□□□□□ -0.03
TMEM258-202ENST00000535042 STARD7Q9NQZ5 370 aa14.84□□□□□ -0.03
TMEM258-202ENST00000535042 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.84□□□□□ -0.03
TMEM258-202ENST00000535042 VAV3Q9UKW4 847 aa14.84□□□□□ -0.03
TMEM258-202ENST00000535042 ELP1O95163 1332 aa14.84□□□□□ -0.03
TMEM258-202ENST00000535042 DOCK5Q9H7D0 1870 aa14.83□□□□□ -0.04
TMEM258-202ENST00000535042 HAS3O00219 553 aa14.83□□□□□ -0.04
TMEM258-202ENST00000535042 LGR5O75473 907 aa14.83□□□□□ -0.04
TMEM258-202ENST00000535042 CABYRO75952 493 aa14.83□□□□□ -0.04
TMEM258-202ENST00000535042 F2P00734 622 aa14.83□□□□□ -0.04
TMEM258-202ENST00000535042 KRT76Q01546 638 aa14.83□□□□□ -0.04
TMEM258-202ENST00000535042 LRRC26Q2I0M4 334 aa14.83□□□□□ -0.04
TMEM258-202ENST00000535042 ZNF746Q6NUN9 644 aaPredicted RBP14.83□□□□□ -0.04
TMEM258-202ENST00000535042 ABHD15Q6UXT9 468 aa14.83□□□□□ -0.04
TMEM258-202ENST00000535042 VTI1AQ96AJ9 217 aa14.83□□□□□ -0.04
TMEM258-202ENST00000535042 ZDHHC9Q9Y397 364 aa14.83□□□□□ -0.04
TMEM258-202ENST00000535042 IGKV6D-21A0A0A0MT36 114 aa14.82□□□□□ -0.04
TMEM258-202ENST00000535042 EML1O00423 815 aa14.82□□□□□ -0.04
TMEM258-202ENST00000535042 CHMP2AO43633 222 aa14.82□□□□□ -0.04
TMEM258-202ENST00000535042 MARCH6O60337 910 aa14.82□□□□□ -0.04
TMEM258-202ENST00000535042 SUPT20HL2P0C7V6 817 aa14.82□□□□□ -0.04
TMEM258-202ENST00000535042 ZSCAN22P10073 491 aaPredicted RBP14.82□□□□□ -0.04
TMEM258-202ENST00000535042 TXKP42681 527 aa14.82□□□□□ -0.04
TMEM258-202ENST00000535042 PSEN2P49810 448 aa14.82□□□□□ -0.04
TMEM258-202ENST00000535042 CDK7P50613 346 aa14.82□□□□□ -0.04
TMEM258-202ENST00000535042 SPIRE1Q08AE8 756 aa14.82□□□□□ -0.04
TMEM258-202ENST00000535042 PTGDRQ13258 359 aa14.82□□□□□ -0.04
TMEM258-202ENST00000535042 ORC2Q13416 577 aaPredicted RBP14.82□□□□□ -0.04
TMEM258-202ENST00000535042 ITGA7Q13683 1181 aa14.82□□□□□ -0.04
TMEM258-202ENST00000535042 SNX17Q15036 470 aa14.82□□□□□ -0.04
TMEM258-202ENST00000535042 NBPF20Q3BBV1 942 aa14.82□□□□□ -0.04
TMEM258-202ENST00000535042 SLC43A3Q8NBI5 491 aa14.82□□□□□ -0.04
TMEM258-202ENST00000535042 RNF216Q9NWF9 866 aaPredicted RBP14.82□□□□□ -0.04
TMEM258-202ENST00000535042 RBM19Q9Y4C8 960 aaKnown RBP14.82□□□□□ -0.04
TMEM258-202ENST00000535042 BRCA2P51587 3418 aa14.81□□□□□ -0.04
TMEM258-202ENST00000535042 A0A0U1RQG5 324 aaPredicted RBP14.81□□□□□ -0.04
TMEM258-202ENST00000535042 H3BRB1 525 aa14.81□□□□□ -0.04
TMEM258-202ENST00000535042 ARVCFO00192 962 aa14.81□□□□□ -0.04
TMEM258-202ENST00000535042 BAG4O95429 457 aaKnown RBP14.81□□□□□ -0.04
TMEM258-202ENST00000535042 F13A1P00488 732 aa14.81□□□□□ -0.04
TMEM258-202ENST00000535042 OR52Z1P0C646 297 aa14.81□□□□□ -0.04
TMEM258-202ENST00000535042 DDIT3P35638 169 aa14.81□□□□□ -0.04
TMEM258-202ENST00000535042 ANP32AP39687 249 aaKnown RBP14.81□□□□□ -0.04
TMEM258-202ENST00000535042 CHMP4BP1P59074 171 aa14.81□□□□□ -0.04
TMEM258-202ENST00000535042 PPP2R5CQ13362 524 aa14.81□□□□□ -0.04
TMEM258-202ENST00000535042 MFSD10Q14728 455 aa14.81□□□□□ -0.04
TMEM258-202ENST00000535042 KIAA0753Q2KHM9 967 aa14.81□□□□□ -0.04
TMEM258-202ENST00000535042 TRIM60Q495X7 471 aa14.81□□□□□ -0.04
TMEM258-202ENST00000535042 SWSAP1Q6NVH7 229 aa14.81□□□□□ -0.04
TMEM258-202ENST00000535042 CCDC60Q8IWA6 550 aaPredicted RBP14.81□□□□□ -0.04
TMEM258-202ENST00000535042 SLFN12Q8IYM2 578 aa14.81□□□□□ -0.04
TMEM258-202ENST00000535042 FTOQ9C0B1 505 aaKnown RBP eCLIP14.81□□□□□ -0.04
TMEM258-202ENST00000535042 ZSCAN16Q9H4T2 348 aaPredicted RBP14.81□□□□□ -0.04
TMEM258-202ENST00000535042 TUT1Q9H6E5 874 aaKnown RBP14.81□□□□□ -0.04
TMEM258-202ENST00000535042 TTC12Q9H892 705 aaPredicted RBP14.81□□□□□ -0.04
TMEM258-202ENST00000535042 DISC1Q9NRI5 854 aa14.81□□□□□ -0.04
TMEM258-202ENST00000535042 PCDHA10Q9Y5I2 948 aa14.81□□□□□ -0.04
TMEM258-202ENST00000535042 EMSYQ7Z589 1322 aa14.81□□□□□ -0.04
TMEM258-202ENST00000535042 WDR64B1ANS9 1081 aa14.8□□□□□ -0.04
TMEM258-202ENST00000535042 BRD1O95696 1058 aa14.8□□□□□ -0.04
TMEM258-202ENST00000535042 PDIA4P13667 645 aaKnown RBP14.8□□□□□ -0.04
TMEM258-202ENST00000535042 ATP4AP20648 1035 aa14.8□□□□□ -0.04
TMEM258-202ENST00000535042 MARK3P27448 753 aa14.8□□□□□ -0.04
TMEM258-202ENST00000535042 STAT5BP51692 787 aa14.8□□□□□ -0.04
TMEM258-202ENST00000535042 RTP1P59025 263 aa14.8□□□□□ -0.04
TMEM258-202ENST00000535042 HIC1Q14526 733 aa14.8□□□□□ -0.04
TMEM258-202ENST00000535042 IL17AQ16552 155 aa14.8□□□□□ -0.04
TMEM258-202ENST00000535042 C1orf53Q5VUE5 145 aa14.8□□□□□ -0.04
TMEM258-202ENST00000535042 MIS18BP1Q6P0N0 1132 aa14.8□□□□□ -0.04
TMEM258-202ENST00000535042 MIER3Q7Z3K6 550 aa14.8□□□□□ -0.04
TMEM258-202ENST00000535042 SMAP1Q8IYB5 467 aaPredicted RBP14.8□□□□□ -0.04
TMEM258-202ENST00000535042 GLG1Q92896 1179 aa14.8□□□□□ -0.04
TMEM258-202ENST00000535042 RNPEPQ9H4A4 650 aa14.8□□□□□ -0.04
TMEM258-202ENST00000535042 SMARCAD1Q9H4L7 1026 aa14.8□□□□□ -0.04
TMEM258-202ENST00000535042 TCEAL9Q9UHQ7 104 aa14.8□□□□□ -0.04
TMEM258-202ENST00000535042 PCDHA12Q9UN75 941 aa14.8□□□□□ -0.04
TMEM258-202ENST00000535042 SAMM50Q9Y512 469 aa14.8□□□□□ -0.04
TMEM258-202ENST00000535042 CLIC4Q9Y696 253 aa14.8□□□□□ -0.04
TMEM258-202ENST00000535042 BACH1O14867 736 aa14.79□□□□□ -0.04
TMEM258-202ENST00000535042 PSAPP07602 524 aa14.79□□□□□ -0.04
TMEM258-202ENST00000535042 SFNP31947 248 aa14.79□□□□□ -0.04
TMEM258-202ENST00000535042 JAK3P52333 1124 aa14.79□□□□□ -0.04
TMEM258-202ENST00000535042 ATP2C1P98194 919 aaPredicted RBP14.79□□□□□ -0.04
TMEM258-202ENST00000535042 TLE2Q04725 743 aa14.79□□□□□ -0.04
TMEM258-202ENST00000535042 SF3A1Q15459 793 aaKnown RBP14.79□□□□□ -0.04
TMEM258-202ENST00000535042 UGCGQ16739 394 aa14.79□□□□□ -0.04
TMEM258-202ENST00000535042 NCAPH2Q6IBW4 605 aa14.79□□□□□ -0.04
TMEM258-202ENST00000535042 PLPPR4Q7Z2D5 763 aa14.79□□□□□ -0.04
TMEM258-202ENST00000535042 RDM1Q8NG50 284 aa14.79□□□□□ -0.04
TMEM258-202ENST00000535042 AFAP1L1Q8TED9 768 aa14.79□□□□□ -0.04
TMEM258-202ENST00000535042 USP28Q96RU2 1077 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 182.8 ms