RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ARHGEF6Q15052 776 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 SUPT20HL1Q3ZLR7 823 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 CFAP100Q494V2 611 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 STRIP1Q5VSL9 837 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 C17orf99Q6UX52 265 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 LCNL1Q6ZST4 164 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 TTC6Q86TZ1 520 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 APOBEC3FQ8IUX4 373 aaKnown RBP3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 ANKRD13AQ8IZ07 590 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 TDHQ8IZJ6 230 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 ABHD4Q8TB40 342 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 MYLIPQ8WY64 445 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 KCNN1Q92952 543 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 ZKSCAN4Q969J2 545 aaPredicted RBP3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 UBE2FQ969M7 185 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 FAM122AQ96E09 287 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 TMEM39BQ9GZU3 492 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 SEMA3GQ9NS98 782 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 SLAMF8Q9P0V8 285 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 ZSWIM5Q9P217 1185 aa3.87□□□□□ -1.79
CHMP4A-208ENST00000534106 TAF1P21675 1872 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 BDP1A6H8Y1 2624 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 SCN9AQ15858 1988 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 TCP10L2B9ZVM9 353 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 ADCY3O60266 1144 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 SLITRK5O94991 958 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 IGHA2P01877 340 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 CYP2C8P10632 490 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 CYP7A1P22680 504 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 PLA2G5P39877 138 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 FLT3LGP49771 235 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 CCT4P50991 539 aaKnown RBP3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 RBM5P52756 815 aaKnown RBP eCLIP3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 CACNB3P54284 484 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 HSP90AB3PQ58FF7 597 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 ZNF746Q6NUN9 644 aaPredicted RBP3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 ATG14Q6ZNE5 492 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 TMC7Q7Z402 723 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 C1QL4Q86Z23 238 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 ANKRD18AQ8IVF6 992 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 MFSD2AQ8NA29 543 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 USP38Q8NB14 1042 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 PLBD2Q8NHP8 589 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 MAFAQ8NHW3 353 aaPredicted RBP3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 PNISRQ8TF01 805 aaKnown RBP3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 TEPSINQ96N21 525 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 ALPK1Q96QP1 1244 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 TDRD3Q9H7E2 651 aaKnown RBP3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 CHPF2Q9P2E5 772 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 ZNF70Q9UC06 446 aaPredicted RBP3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 TSPYL4Q9UJ04 414 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 XDHP47989 1333 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 MYPNQ86TC9 1320 aa3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 COL3A1P02461 1466 aaPredicted RBP3.86□□□□□ -1.79
CHMP4A-208ENST00000534106 CDH23Q9H251 3354 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 PDHXO00330 501 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 PRRG2O14669 202 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 ENC1O14682 589 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 PAGE1O75459 146 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 TAF5LO75529 589 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 CETPP11597 493 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 HOXD10P28358 340 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 MAPK1P28482 360 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 NTF4P34130 210 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 MAPK8P45983 427 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 HK2P52789 917 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 UBXN2AP68543 259 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 RING1Q06587 406 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 MAP3K12Q12852 859 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 MOGSQ13724 837 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 KCNA10Q16322 511 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 MIGA2Q7L4E1 593 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 HDXQ7Z353 690 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 NECAB2Q7Z6G3 386 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 CILP2Q8IUL8 1156 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 PPM1EQ8WY54 764 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 PLEKHF1Q96S99 279 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 MYD88Q99836 296 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 COA1Q9GZY4 146 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 TTYH1Q9H313 450 aaPredicted RBP3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 GREM2Q9H772 168 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 PHAXQ9H814 394 aaKnown RBP3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 KCNK12Q9HB15 430 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 CD209Q9NNX6 404 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 DCTN4Q9UJW0 460 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 CYP8B1Q9UNU6 501 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 NUDCQ9Y266 331 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 SNCAIPQ9Y6H5 919 aa3.85□□□□□ -1.79
CHMP4A-208ENST00000534106 KRTAP9-7A8MTY7 169 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 NUAK1O60285 661 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 PDE8AO60658 829 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 INHBBP09529 407 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 PPP2R1AP30153 589 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 PRMT2P55345 433 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 SNAPC2Q13487 334 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 INPP5AQ14642 412 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 SHHQ15465 462 aa3.84□□□□□ -1.79
CHMP4A-208ENST00000534106 NFE2L2Q16236 605 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms