RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 TBC1D8O95759 1140 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 SH3BGRP55822 239 aaPredicted RBP11.64□□□□□ -0.55
COLCA1-203ENST00000532918 ORC2Q13416 577 aaPredicted RBP11.64□□□□□ -0.55
COLCA1-203ENST00000532918 RNF219Q5W0B1 726 aaPredicted RBP11.64□□□□□ -0.55
COLCA1-203ENST00000532918 RASGRP4Q8TDF6 673 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 PGBD1Q96JS3 809 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.64□□□□□ -0.55
COLCA1-203ENST00000532918 TYW1Q9NV66 732 aaKnown RBP11.64□□□□□ -0.55
COLCA1-203ENST00000532918 PRELPP51888 382 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 RCAN1P53805 252 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 ARL6IP4Q66PJ3 421 aaKnown RBP11.64□□□□□ -0.55
COLCA1-203ENST00000532918 NUDT18Q6ZVK8 323 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.64□□□□□ -0.55
COLCA1-203ENST00000532918 CDKL2Q92772 493 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 MRRFQ96E11 262 aaKnown RBP11.64□□□□□ -0.55
COLCA1-203ENST00000532918 FAM8A1Q9UBU6 413 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 A6NNZ2 444 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 ENTPD3O75355 529 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 SEC24BO95487 1268 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 PLA2G4BP0C869 781 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 TUBB8Q3ZCM7 444 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 PPP4R3CPQ6ZMV5 832 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 B4GALNT4Q76KP1 1039 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 BEST2Q8NFU1 509 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 LPAR1Q92633 364 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 MRPL47Q9HD33 250 aaKnown RBP11.64□□□□□ -0.55
COLCA1-203ENST00000532918 POLIQ9UNA4 740 aa11.64□□□□□ -0.55
COLCA1-203ENST00000532918 CSPG5O95196 566 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 KRT15P19012 456 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 EEF1GP26641 437 aaKnown RBP11.63□□□□□ -0.55
COLCA1-203ENST00000532918 GBP1P32455 592 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 FKBP3Q00688 224 aaKnown RBP11.63□□□□□ -0.55
COLCA1-203ENST00000532918 TBC1D16Q8TBP0 767 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 PSPC1Q8WXF1 523 aaKnown RBP11.63□□□□□ -0.55
COLCA1-203ENST00000532918 FAM20AQ96MK3 541 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 TRIM31Q9BZY9 425 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 PRDM5Q9NQX1 630 aaPredicted RBP11.63□□□□□ -0.55
COLCA1-203ENST00000532918 NXF1Q9UBU9 619 aaKnown RBP11.63□□□□□ -0.55
COLCA1-203ENST00000532918 ABCA9Q8IUA7 1624 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 H7C0C1 242 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 ATP5OP48047 213 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 TSNAXIP1Q2TAA8 658 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 KLHL7Q8IXQ5 586 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 MB21D1Q8N884 522 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 FAM76AQ8TAV0 307 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 WHAMMQ8TF30 809 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 TRIM56Q9BRZ2 755 aaKnown RBP11.63□□□□□ -0.55
COLCA1-203ENST00000532918 POLR3EQ9NVU0 708 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 PCDHA7Q9UN72 937 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 CYP2D7A0A087X1C5 515 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 STMN1P16949 149 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 MTX1Q13505 466 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 PRR5LQ6MZQ0 368 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 RSBN1LQ6PCB5 846 aaPredicted RBP11.63□□□□□ -0.55
COLCA1-203ENST00000532918 CTAGE3PQ8IX95 158 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 SKA2Q8WVK7 121 aaPredicted RBP11.63□□□□□ -0.55
COLCA1-203ENST00000532918 CNTNAP4Q9C0A0 1308 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 PPARGP37231 505 aaPredicted RBP11.63□□□□□ -0.55
COLCA1-203ENST00000532918 RECQLP46063 649 aaPredicted RBP11.63□□□□□ -0.55
COLCA1-203ENST00000532918 COG2Q14746 738 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 TTC39CQ8N584 583 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 P2RX5Q93086 422 aa11.63□□□□□ -0.55
COLCA1-203ENST00000532918 RPAP3Q9H6T3 665 aaPredicted RBP11.63□□□□□ -0.55
COLCA1-203ENST00000532918 RNF17Q9BXT8 1623 aaKnown RBP11.62□□□□□ -0.55
COLCA1-203ENST00000532918 BUB1BO60566 1050 aaPredicted RBP11.62□□□□□ -0.55
COLCA1-203ENST00000532918 GCKP35557 465 aa11.62□□□□□ -0.55
COLCA1-203ENST00000532918 RFX6Q8HWS3 928 aa11.62□□□□□ -0.55
COLCA1-203ENST00000532918 PARD3BQ8TEW8 1205 aa11.62□□□□□ -0.55
COLCA1-203ENST00000532918 SPATA33Q96N06 139 aa11.62□□□□□ -0.55
COLCA1-203ENST00000532918 TMEM47Q9BQJ4 181 aa11.62□□□□□ -0.55
COLCA1-203ENST00000532918 PTPRMP28827 1452 aa11.62□□□□□ -0.55
COLCA1-203ENST00000532918 HUNKP57058 714 aa11.62□□□□□ -0.55
COLCA1-203ENST00000532918 ZNF589Q86UQ0 364 aaPredicted RBP11.62□□□□□ -0.55
COLCA1-203ENST00000532918 CNOT6LQ96LI5 555 aaKnown RBP11.62□□□□□ -0.55
COLCA1-203ENST00000532918 HEXIM2Q96MH2 286 aaKnown RBP11.62□□□□□ -0.55
COLCA1-203ENST00000532918 PPP1R16BQ96T49 567 aa11.62□□□□□ -0.55
COLCA1-203ENST00000532918 INPP5FQ9Y2H2 1132 aa11.62□□□□□ -0.55
COLCA1-203ENST00000532918 GLI2P10070 1586 aa11.62□□□□□ -0.55
COLCA1-203ENST00000532918 HUS1O60921 280 aa11.62□□□□□ -0.55
COLCA1-203ENST00000532918 MXI1P50539 228 aa11.62□□□□□ -0.55
COLCA1-203ENST00000532918 SF3B3Q15393 1217 aaKnown RBP11.62□□□□□ -0.55
COLCA1-203ENST00000532918 ZNF667Q5HYK9 610 aa11.62□□□□□ -0.55
COLCA1-203ENST00000532918 RAB3IPQ96QF0 476 aaPredicted RBP11.62□□□□□ -0.55
COLCA1-203ENST00000532918 MTRQ99707 1265 aa11.62□□□□□ -0.55
COLCA1-203ENST00000532918 EMILIN3Q9NT22 766 aa11.62□□□□□ -0.55
COLCA1-203ENST00000532918 GINM1Q9NU53 330 aa11.62□□□□□ -0.55
COLCA1-203ENST00000532918 MTMR6Q9Y217 621 aa11.62□□□□□ -0.55
COLCA1-203ENST00000532918 MEIS1O00470 390 aa11.62□□□□□ -0.55
COLCA1-203ENST00000532918 WDR46O15213 610 aaKnown RBP11.62□□□□□ -0.55
COLCA1-203ENST00000532918 ADCY8P40145 1251 aa11.62□□□□□ -0.55
COLCA1-203ENST00000532918 OSTNP61366 133 aa11.62□□□□□ -0.55
COLCA1-203ENST00000532918 TSPYL2Q9H2G4 693 aaPredicted RBP11.62□□□□□ -0.55
COLCA1-203ENST00000532918 KDM6AO15550 1401 aaPredicted RBP11.61□□□□□ -0.55
COLCA1-203ENST00000532918 RPS6KA2Q15349 733 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 CCDC38Q502W7 563 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 TMTC3Q6ZXV5 915 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 DCP1AQ9NPI6 582 aaPredicted RBP11.61□□□□□ -0.55
COLCA1-203ENST00000532918 MAP3K20Q9NYL2 800 aaKnown RBP11.61□□□□□ -0.55
COLCA1-203ENST00000532918 USH1CQ9Y6N9 552 aa11.61□□□□□ -0.55
COLCA1-203ENST00000532918 NCOA3Q9Y6Q9 1424 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms