RNA–Protein interactions for RNA: ENST00000531768.1

RSF1-210, Transcript of remodeling and spacing factor 1, human

TSL 2

Gene RSF1, Length 626 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RSF1-210	ENST00000531768	SLC6A20	Q9NP91	592 aa		5.93	□□□□□ -1.46
RSF1-210	ENST00000531768	KCND1	Q9NSA2	647 aa		5.93	□□□□□ -1.46
RSF1-210	ENST00000531768	SCAMP3	O14828	347 aa	Known RBP	5.92	□□□□□ -1.46
RSF1-210	ENST00000531768	SLC27A2	O14975	620 aa		5.92	□□□□□ -1.46
RSF1-210	ENST00000531768	DGCR2	P98153	550 aa		5.92	□□□□□ -1.46
RSF1-210	ENST00000531768	GRIN1	Q05586	938 aa		5.92	□□□□□ -1.46
RSF1-210	ENST00000531768	LSM12	Q3MHD2	195 aa	Known RBP	5.92	□□□□□ -1.46
RSF1-210	ENST00000531768	SV2C	Q496J9	727 aa		5.92	□□□□□ -1.46
RSF1-210	ENST00000531768	STPG3	Q8N7X2	389 aa		5.92	□□□□□ -1.46
RSF1-210	ENST00000531768	TMEM145	Q8NBT3	493 aa		5.92	□□□□□ -1.46
RSF1-210	ENST00000531768	PIP4K2C	Q8TBX8	421 aa		5.92	□□□□□ -1.46
RSF1-210	ENST00000531768	LRP2BP	Q9P2M1	347 aa		5.92	□□□□□ -1.46
RSF1-210	ENST00000531768	PTPN22	Q9Y2R2	807 aa		5.92	□□□□□ -1.46
RSF1-210	ENST00000531768	NPFFR2	Q9Y5X5	522 aa		5.92	□□□□□ -1.46
RSF1-210	ENST00000531768	RAD17	O75943	681 aa		5.91	□□□□□ -1.46
RSF1-210	ENST00000531768	ZNF888	P0CJ79	500 aa	Predicted RBP	5.91	□□□□□ -1.46
RSF1-210	ENST00000531768	ACO1	P21399	889 aa	Known RBP	5.91	□□□□□ -1.46
RSF1-210	ENST00000531768	GLRB	P48167	497 aa		5.91	□□□□□ -1.46
RSF1-210	ENST00000531768	RAC3	P60763	192 aa		5.91	□□□□□ -1.46
RSF1-210	ENST00000531768	USP10	Q14694	798 aa	Known RBP	5.91	□□□□□ -1.46
RSF1-210	ENST00000531768		Q6ZSN1	163 aa		5.91	□□□□□ -1.46
RSF1-210	ENST00000531768	SEC16B	Q96JE7	1060 aa		5.91	□□□□□ -1.46
RSF1-210	ENST00000531768	ARHGAP20	Q9P2F6	1191 aa		5.91	□□□□□ -1.46
RSF1-210	ENST00000531768	ZNF568	Q3ZCX4	644 aa		5.9	□□□□□ -1.46
RSF1-210	ENST00000531768	SLC35F1	Q5T1Q4	408 aa		5.9	□□□□□ -1.46
RSF1-210	ENST00000531768	C6orf15	Q6UXA7	325 aa	Predicted RBP	5.9	□□□□□ -1.46
RSF1-210	ENST00000531768	ANAPC16	Q96DE5	110 aa		5.9	□□□□□ -1.46
RSF1-210	ENST00000531768	JAM3	Q9BX67	310 aa		5.9	□□□□□ -1.46
RSF1-210	ENST00000531768	STRIP2	Q9ULQ0	834 aa		5.9	□□□□□ -1.46
RSF1-210	ENST00000531768		H0Y858	1186 aa		5.89	□□□□□ -1.47
RSF1-210	ENST00000531768	RECK	O95980	971 aa		5.89	□□□□□ -1.47
RSF1-210	ENST00000531768	FAH	P16930	419 aa		5.89	□□□□□ -1.47
RSF1-210	ENST00000531768	INHBC	P55103	352 aa		5.89	□□□□□ -1.47
RSF1-210	ENST00000531768	TUSC3	Q13454	348 aa		5.89	□□□□□ -1.47
RSF1-210	ENST00000531768	PAN2	Q504Q3	1202 aa	Known RBP	5.89	□□□□□ -1.47
RSF1-210	ENST00000531768	RBM12B	Q8IXT5	1001 aa	Known RBP	5.89	□□□□□ -1.47
RSF1-210	ENST00000531768	PDGFD	Q9GZP0	370 aa	Predicted RBP	5.89	□□□□□ -1.47
RSF1-210	ENST00000531768	OAZ3	Q9UMX2	235 aa		5.89	□□□□□ -1.47
RSF1-210	ENST00000531768	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	5.89	□□□□□ -1.47
RSF1-210	ENST00000531768	SLC30A1	Q9Y6M5	507 aa		5.89	□□□□□ -1.47
RSF1-210	ENST00000531768	SUSD5	O60279	629 aa		5.88	□□□□□ -1.47
RSF1-210	ENST00000531768	IL18BP	O95998	194 aa		5.88	□□□□□ -1.47
RSF1-210	ENST00000531768	CAPNS1	P04632	268 aa		5.88	□□□□□ -1.47
RSF1-210	ENST00000531768	C1S	P09871	688 aa		5.88	□□□□□ -1.47
RSF1-210	ENST00000531768	NANOS3	P60323	173 aa	Known RBP	5.88	□□□□□ -1.47
RSF1-210	ENST00000531768	PFKP	Q01813	784 aa		5.88	□□□□□ -1.47
RSF1-210	ENST00000531768	CD276	Q5ZPR3	534 aa		5.88	□□□□□ -1.47
RSF1-210	ENST00000531768	POLN	Q7Z5Q5	900 aa		5.88	□□□□□ -1.47
RSF1-210	ENST00000531768	C1orf210	Q8IVY1	113 aa		5.88	□□□□□ -1.47
RSF1-210	ENST00000531768	CACTIN	Q8WUQ7	758 aa	Known RBP	5.88	□□□□□ -1.47
RSF1-210	ENST00000531768	NEU4	Q8WWR8	484 aa	Predicted RBP	5.88	□□□□□ -1.47
RSF1-210	ENST00000531768	CARD11	Q9BXL7	1154 aa		5.88	□□□□□ -1.47
RSF1-210	ENST00000531768		A0A087X1B8	175 aa		5.87	□□□□□ -1.47
RSF1-210	ENST00000531768	ZNF839	A8K0R7	811 aa		5.87	□□□□□ -1.47
RSF1-210	ENST00000531768		B2RBV5	119 aa		5.87	□□□□□ -1.47
RSF1-210	ENST00000531768	LTF	P02788	710 aa		5.87	□□□□□ -1.47
RSF1-210	ENST00000531768	ENO2	P09104	434 aa	Predicted RBP	5.87	□□□□□ -1.47
RSF1-210	ENST00000531768	CR2	P20023	1033 aa		5.87	□□□□□ -1.47
RSF1-210	ENST00000531768	RNF151	Q2KHN1	245 aa		5.87	□□□□□ -1.47
RSF1-210	ENST00000531768	MAMDC4	Q6UXC1	1216 aa		5.87	□□□□□ -1.47
RSF1-210	ENST00000531768	OTOP3	Q7RTS5	596 aa		5.87	□□□□□ -1.47
RSF1-210	ENST00000531768	FAM178B	Q8IXR5	827 aa		5.87	□□□□□ -1.47
RSF1-210	ENST00000531768	IL17D	Q8TAD2	202 aa		5.87	□□□□□ -1.47
RSF1-210	ENST00000531768	GPR27	Q9NS67	375 aa		5.87	□□□□□ -1.47
RSF1-210	ENST00000531768	PPARGC1A	Q9UBK2	798 aa	Known RBP	5.87	□□□□□ -1.47
RSF1-210	ENST00000531768	MSC	O60682	206 aa		5.86	□□□□□ -1.47
RSF1-210	ENST00000531768	KRTAP15-1	Q3LI76	137 aa		5.86	□□□□□ -1.47
RSF1-210	ENST00000531768	UHMK1	Q8TAS1	419 aa	Known RBP	5.86	□□□□□ -1.47
RSF1-210	ENST00000531768	FAM89A	Q96GI7	184 aa		5.86	□□□□□ -1.47
RSF1-210	ENST00000531768	PLEKHG4B	Q96PX9	1271 aa		5.86	□□□□□ -1.47
RSF1-210	ENST00000531768	DPYSL5	Q9BPU6	564 aa		5.86	□□□□□ -1.47
RSF1-210	ENST00000531768	TACO1	Q9BSH4	297 aa	Known RBP	5.86	□□□□□ -1.47
RSF1-210	ENST00000531768	TELO2	Q9Y4R8	837 aa		5.86	□□□□□ -1.47
RSF1-210	ENST00000531768	U2SURP	O15042	1029 aa	Known RBP	5.85	□□□□□ -1.47
RSF1-210	ENST00000531768	VAMP1	P23763	118 aa		5.85	□□□□□ -1.47
RSF1-210	ENST00000531768	ACRV1	P26436	265 aa		5.85	□□□□□ -1.47
RSF1-210	ENST00000531768	POLD1	P28340	1107 aa		5.85	□□□□□ -1.47
RSF1-210	ENST00000531768	MAP4K2	Q12851	820 aa		5.85	□□□□□ -1.47
RSF1-210	ENST00000531768	DUSP8	Q13202	625 aa		5.85	□□□□□ -1.47
RSF1-210	ENST00000531768	LDLRAD3	Q86YD5	345 aa		5.85	□□□□□ -1.47
RSF1-210	ENST00000531768	NT5DC4	Q86YG4	428 aa		5.85	□□□□□ -1.47
RSF1-210	ENST00000531768	OR14A2	Q96R54	314 aa		5.85	□□□□□ -1.47
RSF1-210	ENST00000531768	CDC14B	O60729	498 aa		5.84	□□□□□ -1.47
RSF1-210	ENST00000531768	CUTA	O60888	179 aa		5.84	□□□□□ -1.47
RSF1-210	ENST00000531768	GRIA2	P42262	883 aa		5.84	□□□□□ -1.47
RSF1-210	ENST00000531768	TOP3A	Q13472	1001 aa	Predicted RBP	5.84	□□□□□ -1.47
RSF1-210	ENST00000531768	FNDC7	Q5VTL7	733 aa		5.84	□□□□□ -1.47
RSF1-210	ENST00000531768	MRM1	Q6IN84	353 aa	Known RBP	5.84	□□□□□ -1.47
RSF1-210	ENST00000531768	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	5.84	□□□□□ -1.47
RSF1-210	ENST00000531768	PLA2G12B	Q9BX93	195 aa		5.84	□□□□□ -1.47
RSF1-210	ENST00000531768	ACTR10	Q9NZ32	417 aa		5.84	□□□□□ -1.47
RSF1-210	ENST00000531768	NUB1	Q9Y5A7	615 aa		5.84	□□□□□ -1.47
RSF1-210	ENST00000531768	MATN2	O00339	956 aa		5.83	□□□□□ -1.48
RSF1-210	ENST00000531768	SMAD7	O15105	426 aa	Known RBP	5.83	□□□□□ -1.48
RSF1-210	ENST00000531768	COL6A2	P12110	1019 aa		5.83	□□□□□ -1.48
RSF1-210	ENST00000531768	TUBA3C	Q13748	450 aa		5.83	□□□□□ -1.48
RSF1-210	ENST00000531768	ZMAT1	Q5H9K5	638 aa		5.83	□□□□□ -1.48
RSF1-210	ENST00000531768	HABP4	Q5JVS0	413 aa	Known RBP	5.83	□□□□□ -1.48
RSF1-210	ENST00000531768	LARP1B	Q659C4	914 aa	Known RBP	5.83	□□□□□ -1.48
RSF1-210	ENST00000531768	TUBA3E	Q6PEY2	450 aa		5.83	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms