RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-225	ENST00000531243	FOXD4L5	Q5VV16	416 aa	Predicted RBP	24.02	■■□□□ 1.44
PABPC4-225	ENST00000531243	ATL3	Q6DD88	541 aa		24.02	■■□□□ 1.44
PABPC4-225	ENST00000531243	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	24.02	■■□□□ 1.44
PABPC4-225	ENST00000531243	HAS1	Q92839	578 aa		24.02	■■□□□ 1.44
PABPC4-225	ENST00000531243	VTI1A	Q96AJ9	217 aa		24.02	■■□□□ 1.44
PABPC4-225	ENST00000531243	UIMC1	Q96RL1	719 aa		24.02	■■□□□ 1.44
PABPC4-225	ENST00000531243	MTG1	Q9BT17	334 aa	Predicted RBP	24.02	■■□□□ 1.44
PABPC4-225	ENST00000531243	SEZ6L	Q9BYH1	1024 aa		24.02	■■□□□ 1.44
PABPC4-225	ENST00000531243	RAB34	Q9BZG1	259 aa		24.02	■■□□□ 1.44
PABPC4-225	ENST00000531243	C11orf49	Q9H6J7	331 aa		24.02	■■□□□ 1.44
PABPC4-225	ENST00000531243	ZNF215	Q9UL58	517 aa	Predicted RBP	24.02	■■□□□ 1.44
PABPC4-225	ENST00000531243	PCDHA10	Q9Y5I2	948 aa		24.02	■■□□□ 1.44
PABPC4-225	ENST00000531243	KAT6A	Q92794	2004 aa		24.01	■■□□□ 1.43
PABPC4-225	ENST00000531243	WNT7A	O00755	349 aa		24.01	■■□□□ 1.43
PABPC4-225	ENST00000531243	PSAP	P07602	524 aa		24.01	■■□□□ 1.43
PABPC4-225	ENST00000531243	HOXD8	P13378	290 aa	Predicted RBP	24.01	■■□□□ 1.43
PABPC4-225	ENST00000531243	TXK	P42681	527 aa		24.01	■■□□□ 1.43
PABPC4-225	ENST00000531243	PURA	Q00577	322 aa	Known RBP	24.01	■■□□□ 1.43
PABPC4-225	ENST00000531243	PTGDR	Q13258	359 aa		24.01	■■□□□ 1.43
PABPC4-225	ENST00000531243	PPP2R5C	Q13362	524 aa		24.01	■■□□□ 1.43
PABPC4-225	ENST00000531243	NBR1	Q14596	966 aa		24.01	■■□□□ 1.43
PABPC4-225	ENST00000531243	MIER3	Q7Z3K6	550 aa		24.01	■■□□□ 1.43
PABPC4-225	ENST00000531243	TNPO1	Q92973	898 aa	Known RBP	24.01	■■□□□ 1.43
PABPC4-225	ENST00000531243	MTMR9	Q96QG7	549 aa		24.01	■■□□□ 1.43
PABPC4-225	ENST00000531243	BCAS3	Q9H6U6	928 aa		24.01	■■□□□ 1.43
PABPC4-225	ENST00000531243	TTC12	Q9H892	705 aa	Predicted RBP	24.01	■■□□□ 1.43
PABPC4-225	ENST00000531243	STARD7	Q9NQZ5	370 aa		24.01	■■□□□ 1.43
PABPC4-225	ENST00000531243	CIZ1	Q9ULV3	898 aa	Predicted RBP	24.01	■■□□□ 1.43
PABPC4-225	ENST00000531243	ATG7	O95352	703 aa		24	■■□□□ 1.43
PABPC4-225	ENST00000531243	PRPH	P41219	470 aa		24	■■□□□ 1.43
PABPC4-225	ENST00000531243	PKP1	Q13835	747 aa		24	■■□□□ 1.43
PABPC4-225	ENST00000531243	FAM160B1	Q5W0V3	765 aa		24	■■□□□ 1.43
PABPC4-225	ENST00000531243	PAWR	Q96IZ0	340 aa	Known RBP	24	■■□□□ 1.43
PABPC4-225	ENST00000531243	IPO9	Q96P70	1041 aa	Known RBP	24	■■□□□ 1.43
PABPC4-225	ENST00000531243	SENP6	Q9GZR1	1112 aa	Predicted RBP	24	■■□□□ 1.43
PABPC4-225	ENST00000531243	SMARCAD1	Q9H4L7	1026 aa		24	■■□□□ 1.43
PABPC4-225	ENST00000531243		A0A1W2PQ45	241 aa	Predicted RBP	23.99	■■□□□ 1.43
PABPC4-225	ENST00000531243	GSTTP1	A0A1W2PQM5	241 aa		23.99	■■□□□ 1.43
PABPC4-225	ENST00000531243		A0A1W2PQY0	241 aa		23.99	■■□□□ 1.43
PABPC4-225	ENST00000531243	CHMP2A	O43633	222 aa		23.99	■■□□□ 1.43
PABPC4-225	ENST00000531243	LGALS2	P05162	132 aa		23.99	■■□□□ 1.43
PABPC4-225	ENST00000531243	IRX5	P78411	483 aa	Predicted RBP	23.99	■■□□□ 1.43
PABPC4-225	ENST00000531243	SF3A1	Q15459	793 aa	Known RBP	23.99	■■□□□ 1.43
PABPC4-225	ENST00000531243	ARL6IP4	Q66PJ3	421 aa	Known RBP	23.99	■■□□□ 1.43
PABPC4-225	ENST00000531243	CXCL17	Q6UXB2	119 aa		23.99	■■□□□ 1.43
PABPC4-225	ENST00000531243	GLG1	Q92896	1179 aa		23.99	■■□□□ 1.43
PABPC4-225	ENST00000531243	TMEM60	Q9H2L4	133 aa		23.99	■■□□□ 1.43
PABPC4-225	ENST00000531243	UNC45A	Q9H3U1	944 aa		23.99	■■□□□ 1.43
PABPC4-225	ENST00000531243	DISC1	Q9NRI5	854 aa		23.99	■■□□□ 1.43
PABPC4-225	ENST00000531243	CFAP45	Q9UL16	551 aa		23.99	■■□□□ 1.43
PABPC4-225	ENST00000531243	STK24	Q9Y6E0	443 aa		23.99	■■□□□ 1.43
PABPC4-225	ENST00000531243	EMSY	Q7Z589	1322 aa		23.99	■■□□□ 1.43
PABPC4-225	ENST00000531243	BACH1	O14867	736 aa		23.98	■■□□□ 1.43
PABPC4-225	ENST00000531243	DKC1	O60832	514 aa	Known RBP eCLIP	23.98	■■□□□ 1.43
PABPC4-225	ENST00000531243	SUPT20HL2	P0C7V6	817 aa		23.98	■■□□□ 1.43
PABPC4-225	ENST00000531243	SLC26A2	P50443	739 aa		23.98	■■□□□ 1.43
PABPC4-225	ENST00000531243	ATP2C1	P98194	919 aa	Predicted RBP	23.98	■■□□□ 1.43
PABPC4-225	ENST00000531243	UTP14C	Q5TAP6	766 aa	Known RBP	23.98	■■□□□ 1.43
PABPC4-225	ENST00000531243	ABHD15	Q6UXT9	468 aa		23.98	■■□□□ 1.43
PABPC4-225	ENST00000531243	DTHD1	Q6ZMT9	781 aa		23.98	■■□□□ 1.43
PABPC4-225	ENST00000531243	GJA10	Q969M2	543 aa		23.98	■■□□□ 1.43
PABPC4-225	ENST00000531243	SCN10A	Q9Y5Y9	1956 aa		23.98	■■□□□ 1.43
PABPC4-225	ENST00000531243		A0A0U1RQG5	324 aa	Predicted RBP	23.97	■■□□□ 1.43
PABPC4-225	ENST00000531243	CCNE2	O96020	404 aa		23.97	■■□□□ 1.43
PABPC4-225	ENST00000531243	STAT5B	P51692	787 aa		23.97	■■□□□ 1.43
PABPC4-225	ENST00000531243	NCAPH2	Q6IBW4	605 aa		23.97	■■□□□ 1.43
PABPC4-225	ENST00000531243	FAM173B	Q6P4H8	233 aa		23.97	■■□□□ 1.43
PABPC4-225	ENST00000531243	PLPPR4	Q7Z2D5	763 aa		23.97	■■□□□ 1.43
PABPC4-225	ENST00000531243	C4orf32	Q8N8J7	132 aa		23.97	■■□□□ 1.43
PABPC4-225	ENST00000531243	ERMN	Q8TAM6	284 aa		23.97	■■□□□ 1.43
PABPC4-225	ENST00000531243	FERMT2	Q96AC1	680 aa		23.97	■■□□□ 1.43
PABPC4-225	ENST00000531243	ZNF302	Q9NR11	478 aa		23.97	■■□□□ 1.43
PABPC4-225	ENST00000531243	ERAP1	Q9NZ08	941 aa		23.97	■■□□□ 1.43
PABPC4-225	ENST00000531243	CENPF	P49454	3210 aa		23.96	■■□□□ 1.43
PABPC4-225	ENST00000531243		H3BRB1	525 aa		23.96	■■□□□ 1.43
PABPC4-225	ENST00000531243	LGR5	O75473	907 aa		23.96	■■□□□ 1.43
PABPC4-225	ENST00000531243	F2	P00734	622 aa		23.96	■■□□□ 1.43
PABPC4-225	ENST00000531243	ZNF286B	P0CG31	522 aa		23.96	■■□□□ 1.43
PABPC4-225	ENST00000531243	COL6A1	P12109	1028 aa		23.96	■■□□□ 1.43
PABPC4-225	ENST00000531243	DDIT3	P35638	169 aa		23.96	■■□□□ 1.43
PABPC4-225	ENST00000531243	TEC	P42680	631 aa		23.96	■■□□□ 1.43
PABPC4-225	ENST00000531243	MNX1	P50219	401 aa	Predicted RBP	23.96	■■□□□ 1.43
PABPC4-225	ENST00000531243	B3GNT9	Q6UX72	402 aa		23.96	■■□□□ 1.43
PABPC4-225	ENST00000531243	ATP6V0A1	Q93050	837 aa		23.96	■■□□□ 1.43
PABPC4-225	ENST00000531243	TUT1	Q9H6E5	874 aa	Known RBP	23.96	■■□□□ 1.43
PABPC4-225	ENST00000531243	VAV3	Q9UKW4	847 aa		23.96	■■□□□ 1.43
PABPC4-225	ENST00000531243	MROH7	Q68CQ1	1323 aa		23.95	■■□□□ 1.42
PABPC4-225	ENST00000531243	IGKV6D-21	A0A0A0MT36	114 aa		23.95	■■□□□ 1.42
PABPC4-225	ENST00000531243	PSEN2	P49810	448 aa		23.95	■■□□□ 1.42
PABPC4-225	ENST00000531243	FXR2	P51116	673 aa	Known RBP eCLIP	23.95	■■□□□ 1.42
PABPC4-225	ENST00000531243	PDIA5	Q14554	519 aa		23.95	■■□□□ 1.42
PABPC4-225	ENST00000531243	MFSD10	Q14728	455 aa		23.95	■■□□□ 1.42
PABPC4-225	ENST00000531243	STK38	Q15208	465 aa		23.95	■■□□□ 1.42
PABPC4-225	ENST00000531243	EPHA7	Q15375	998 aa		23.95	■■□□□ 1.42
PABPC4-225	ENST00000531243	SWSAP1	Q6NVH7	229 aa		23.95	■■□□□ 1.42
PABPC4-225	ENST00000531243	AFAP1L1	Q8TED9	768 aa		23.95	■■□□□ 1.42
PABPC4-225	ENST00000531243	DIS3L	Q8TF46	1054 aa	Known RBP	23.95	■■□□□ 1.42
PABPC4-225	ENST00000531243	C16orf70	Q9BSU1	422 aa		23.95	■■□□□ 1.42
PABPC4-225	ENST00000531243	HTATIP2	Q9BUP3	242 aa		23.95	■■□□□ 1.42
PABPC4-225	ENST00000531243	CEBPZ	Q03701	1054 aa	Known RBP	23.94	■■□□□ 1.42

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms