RNA–Protein interactions for RNA: ENST00000529430.1

CLP1-203, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 5 BASIC

Gene CLP1, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-203ENST00000529430 SIPA1L1O43166 1804 aa13.07□□□□□ -0.32
CLP1-203ENST00000529430 ERICH4A6NGS2 130 aa13.07□□□□□ -0.32
CLP1-203ENST00000529430 PIK3CDO00329 1044 aa13.07□□□□□ -0.32
CLP1-203ENST00000529430 KRT86O43790 486 aa13.07□□□□□ -0.32
CLP1-203ENST00000529430 SSBP05455 408 aaKnown RBP eCLIP13.07□□□□□ -0.32
CLP1-203ENST00000529430 CYP3A4P08684 503 aa13.07□□□□□ -0.32
CLP1-203ENST00000529430 HNRNPH3P31942 346 aaKnown RBP13.07□□□□□ -0.32
CLP1-203ENST00000529430 EPHX2P34913 555 aa13.07□□□□□ -0.32
CLP1-203ENST00000529430 WHAMMP3Q1A5X7 153 aa13.07□□□□□ -0.32
CLP1-203ENST00000529430 WDR59Q6PJI9 974 aa13.07□□□□□ -0.32
CLP1-203ENST00000529430 PPP4R3CPQ6ZMV5 832 aa13.07□□□□□ -0.32
CLP1-203ENST00000529430 ETNPPLQ8TBG4 499 aa13.07□□□□□ -0.32
CLP1-203ENST00000529430 ZC3H15Q8WU90 426 aaKnown RBP13.07□□□□□ -0.32
CLP1-203ENST00000529430 HPS3Q969F9 1004 aa13.07□□□□□ -0.32
CLP1-203ENST00000529430 TMX2Q9Y320 296 aa13.07□□□□□ -0.32
CLP1-203ENST00000529430 CCDC151A5D8V7 595 aa13.06□□□□□ -0.32
CLP1-203ENST00000529430 SEC31AO94979 1220 aaKnown RBP13.06□□□□□ -0.32
CLP1-203ENST00000529430 KRT18P05783 430 aaKnown RBP13.06□□□□□ -0.32
CLP1-203ENST00000529430 STAT2P52630 851 aa13.06□□□□□ -0.32
CLP1-203ENST00000529430 SMC1AQ14683 1233 aaKnown RBP13.06□□□□□ -0.32
CLP1-203ENST00000529430 RRP1BQ14684 758 aaKnown RBP13.06□□□□□ -0.32
CLP1-203ENST00000529430 SHROOM1Q2M3G4 852 aaPredicted RBP13.06□□□□□ -0.32
CLP1-203ENST00000529430 PRR16Q569H4 304 aa13.06□□□□□ -0.32
CLP1-203ENST00000529430 PNMA8AQ86V59 439 aaPredicted RBP13.06□□□□□ -0.32
CLP1-203ENST00000529430 GPBP1Q86WP2 473 aa13.06□□□□□ -0.32
CLP1-203ENST00000529430 MSL3Q8N5Y2 521 aaKnown RBP13.06□□□□□ -0.32
CLP1-203ENST00000529430 PARD6BQ9BYG5 372 aa13.06□□□□□ -0.32
CLP1-203ENST00000529430 IRX2Q9BZI1 471 aaPredicted RBP13.06□□□□□ -0.32
CLP1-203ENST00000529430 TSGA10Q9BZW7 698 aa13.06□□□□□ -0.32
CLP1-203ENST00000529430 TSPYL1Q9H0U9 437 aa13.06□□□□□ -0.32
CLP1-203ENST00000529430 EHMT1Q9H9B1 1298 aa13.06□□□□□ -0.32
CLP1-203ENST00000529430 PICK1Q9NRD5 415 aa13.06□□□□□ -0.32
CLP1-203ENST00000529430 DNM3Q9UQ16 869 aa13.06□□□□□ -0.32
CLP1-203ENST00000529430 COL4A3BPQ9Y5P4 624 aa13.06□□□□□ -0.32
CLP1-203ENST00000529430 RASSF10A6NK89 507 aa13.05□□□□□ -0.32
CLP1-203ENST00000529430 PHF20L1A8MW92 1017 aa13.05□□□□□ -0.32
CLP1-203ENST00000529430 E9PMD0 336 aa13.05□□□□□ -0.32
CLP1-203ENST00000529430 CYP11B2P19099 503 aa13.05□□□□□ -0.32
CLP1-203ENST00000529430 RPA1P27694 616 aa13.05□□□□□ -0.32
CLP1-203ENST00000529430 OAS2P29728 719 aaKnown RBP13.05□□□□□ -0.32
CLP1-203ENST00000529430 NF2P35240 595 aa13.05□□□□□ -0.32
CLP1-203ENST00000529430 ZNF76P36508 570 aa13.05□□□□□ -0.32
CLP1-203ENST00000529430 CHMP4BP1P59074 171 aa13.05□□□□□ -0.32
CLP1-203ENST00000529430 HERC4Q5GLZ8 1057 aaPredicted RBP13.05□□□□□ -0.32
CLP1-203ENST00000529430 LRRC55Q6ZSA7 311 aa13.05□□□□□ -0.32
CLP1-203ENST00000529430 KIAA1328Q86T90 577 aa13.05□□□□□ -0.32
CLP1-203ENST00000529430 CHURC1Q8WUH1 139 aa13.05□□□□□ -0.32
CLP1-203ENST00000529430 HNRNPLLQ8WVV9 542 aaKnown RBP13.05□□□□□ -0.32
CLP1-203ENST00000529430 NUCKS1Q9H1E3 243 aaKnown RBP13.05□□□□□ -0.32
CLP1-203ENST00000529430 NHEJ1Q9H9Q4 299 aaPredicted RBP13.05□□□□□ -0.32
CLP1-203ENST00000529430 AS3MTQ9HBK9 375 aa13.05□□□□□ -0.32
CLP1-203ENST00000529430 AGPAT5Q9NUQ2 364 aa13.05□□□□□ -0.32
CLP1-203ENST00000529430 PRR12Q9ULL5 1215 aa13.05□□□□□ -0.32
CLP1-203ENST00000529430 POTEB3A0JP26 581 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 FRMD3A2A2Y4 597 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 POTECB2RU33 542 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 POLR3GO15318 223 aaPredicted RBP13.04□□□□□ -0.32
CLP1-203ENST00000529430 PPP1R12BO60237 982 aaPredicted RBP13.04□□□□□ -0.32
CLP1-203ENST00000529430 PLA2G6O60733 806 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 TUBBP07437 444 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 JAG1P78504 1218 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 USH1GQ495M9 461 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 CCDC40Q4G0X9 1142 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 ZCWPW2Q504Y3 356 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 POTEBQ6S5H4 581 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 KRT26Q7Z3Y9 468 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 FAM160B2Q86V87 743 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 CCDC42Q96M95 316 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 WRNIP1Q96S55 665 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 PSD3Q9NYI0 1048 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 FAM184BQ9ULE4 1060 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 PLAGL2Q9UPG8 496 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 SIK3Q9Y2K2 1263 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 REXO2Q9Y3B8 237 aaKnown RBP13.04□□□□□ -0.32
CLP1-203ENST00000529430 PCDHA2Q9Y5H9 948 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 A0A0U1RQJ8 604 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 TRAF5O00463 557 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 USO1O60763 962 aaKnown RBP13.04□□□□□ -0.32
CLP1-203ENST00000529430 MED24O75448 989 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 SASH3O75995 380 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 SLC12A3P55017 1021 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 MARSP56192 900 aaKnown RBP13.04□□□□□ -0.32
CLP1-203ENST00000529430 SPIRE1Q08AE8 756 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 LRRC41Q15345 812 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 SPA17Q15506 151 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 EDRF1Q3B7T1 1238 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 EAPPQ56P03 285 aaPredicted RBP13.04□□□□□ -0.32
CLP1-203ENST00000529430 MUM1L1Q5H9M0 696 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 CCDC122Q5T0U0 273 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 NCAPH2Q6IBW4 605 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 SCYL3Q8IZE3 742 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 SYT2Q8N9I0 419 aaPredicted RBP13.04□□□□□ -0.32
CLP1-203ENST00000529430 NEK11Q8NG66 645 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 ATRIPQ8WXE1 791 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 JAKMIP2Q96AA8 810 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 POLR3CQ9BUI4 534 aaPredicted RBP13.04□□□□□ -0.32
CLP1-203ENST00000529430 FUT8Q9BYC5 575 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 VCPKMTQ9H867 229 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 MMRN2Q9H8L6 949 aa13.04□□□□□ -0.32
CLP1-203ENST00000529430 GUCA1BQ9UMX6 200 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms