RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 CCDC169A6NNP5 214 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 PRPF3O43395 683 aaKnown RBP13.62□□□□□ -0.23
TSKU-203ENST00000527881 LGR5O75473 907 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 PLTPP55058 493 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 EIF3BP55884 814 aaKnown RBP13.62□□□□□ -0.23
TSKU-203ENST00000527881 SESN3P58005 492 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 OTUD6AQ7L8S5 288 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 PEX26Q7Z412 305 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 CNKSR1Q969H4 720 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 LSM14BQ9BX40 385 aaKnown RBP13.62□□□□□ -0.23
TSKU-203ENST00000527881 TRIM7Q9C029 511 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 RAB17Q9H0T7 212 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 KCNK9Q9NPC2 374 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 PNMA3Q9UL41 463 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 C2CD2Q9Y426 696 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 SPDYE3A6NKU9 549 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 FGFR1OPO95684 399 aaKnown RBP13.62□□□□□ -0.23
TSKU-203ENST00000527881 PCCAP05165 728 aaPredicted RBP13.62□□□□□ -0.23
TSKU-203ENST00000527881 PLCG1P19174 1290 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 HNRNPH3P31942 346 aaKnown RBP13.62□□□□□ -0.23
TSKU-203ENST00000527881 IFI35P80217 286 aaPredicted RBP13.62□□□□□ -0.23
TSKU-203ENST00000527881 TMEM154Q6P9G4 183 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 DYMQ7RTS9 669 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 DZIP3Q86Y13 1208 aaKnown RBP13.62□□□□□ -0.23
TSKU-203ENST00000527881 FAM133AQ8N9E0 248 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 ZNF317Q96PQ6 595 aaPredicted RBP13.62□□□□□ -0.23
TSKU-203ENST00000527881 PIDD1Q9HB75 910 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 ETNK1Q9HBU6 452 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 USP15Q9Y4E8 981 aaPredicted RBP13.62□□□□□ -0.23
TSKU-203ENST00000527881 ABCC12Q96J65 1359 aa13.62□□□□□ -0.23
TSKU-203ENST00000527881 AFF2P51816 1311 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 GSG1L2A8MUP6 293 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 KLRC4O43908 158 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 RARAP10276 462 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 ECHS1P30084 290 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 ESCO1Q5FWF5 840 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 EZH1Q92800 747 aaPredicted RBP13.61□□□□□ -0.23
TSKU-203ENST00000527881 ZMYND12Q9H0C1 365 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 ADAM22Q9P0K1 906 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 SIK3Q9Y2K2 1263 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 NEO1Q92859 1461 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 A0A087X0T9 212 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 TCP11X1B4DZS4 312 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 SERPING1P05155 500 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 FAM228BP0C875 321 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 LRRC23Q53EV4 343 aaPredicted RBP13.61□□□□□ -0.23
TSKU-203ENST00000527881 NAALADL2Q58DX5 795 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 CNNM4Q6P4Q7 775 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 CCDC25Q86WR0 208 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 LCORLQ8N3X6 602 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 NEK9Q8TD19 979 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 ANKS1AQ92625 1134 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 DDX23Q9BUQ8 820 aaKnown RBP13.61□□□□□ -0.23
TSKU-203ENST00000527881 KANSL2Q9H9L4 492 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 DLGAP2Q9P1A6 1054 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 NRXN3Q9Y4C0 1643 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 TSNAXIP1Q2TAA8 658 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 MUM1Q2TAK8 710 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 CABP7Q86V35 215 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 SDR42E1Q8WUS8 393 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 FAM114A2Q9NRY5 505 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 LRP2BPQ9P2M1 347 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 TMEM2Q9UHN6 1383 aa13.61□□□□□ -0.23
TSKU-203ENST00000527881 PIK3C2AO00443 1686 aa13.6□□□□□ -0.23
TSKU-203ENST00000527881 SSU72P8A0A1W2PR75 194 aa13.6□□□□□ -0.23
TSKU-203ENST00000527881 LIN7AO14910 233 aaPredicted RBP13.6□□□□□ -0.23
TSKU-203ENST00000527881 ZNF131P52739 623 aa13.6□□□□□ -0.23
TSKU-203ENST00000527881 CNBD1Q8NA66 436 aa13.6□□□□□ -0.23
TSKU-203ENST00000527881 GPKOWQ92917 476 aaPredicted RBP eCLIP13.6□□□□□ -0.23
TSKU-203ENST00000527881 PBKQ96KB5 322 aa13.6□□□□□ -0.23
TSKU-203ENST00000527881 FAM210AQ96ND0 272 aa13.6□□□□□ -0.23
TSKU-203ENST00000527881 RGL1Q9NZL6 768 aa13.6□□□□□ -0.23
TSKU-203ENST00000527881 LCA5LO95447 670 aa13.6□□□□□ -0.23
TSKU-203ENST00000527881 KRT13P13646 458 aa13.6□□□□□ -0.23
TSKU-203ENST00000527881 PIGWQ7Z7B1 504 aa13.6□□□□□ -0.23
TSKU-203ENST00000527881 VSIG1Q86XK7 387 aa13.6□□□□□ -0.23
TSKU-203ENST00000527881 TEX9Q8N6V9 391 aa13.6□□□□□ -0.23
TSKU-203ENST00000527881 ABCF2Q9UG63 623 aa13.6□□□□□ -0.23
TSKU-203ENST00000527881 TRAPPC10P48553 1259 aa13.6□□□□□ -0.23
TSKU-203ENST00000527881 AMPD3Q01432 767 aa13.6□□□□□ -0.23
TSKU-203ENST00000527881 CUL3Q13618 768 aa13.6□□□□□ -0.23
TSKU-203ENST00000527881 ALX1Q15699 326 aa13.6□□□□□ -0.23
TSKU-203ENST00000527881 ASIC2Q16515 512 aa13.6□□□□□ -0.23
TSKU-203ENST00000527881 FAM83BQ5T0W9 1011 aa13.6□□□□□ -0.23
TSKU-203ENST00000527881 ARL6IP4Q66PJ3 421 aaKnown RBP13.6□□□□□ -0.23
TSKU-203ENST00000527881 ZSCAN29Q8IWY8 852 aaPredicted RBP13.6□□□□□ -0.23
TSKU-203ENST00000527881 GBP7Q8N8V2 638 aaPredicted RBP13.6□□□□□ -0.23
TSKU-203ENST00000527881 GDAP1Q8TB36 358 aa13.6□□□□□ -0.23
TSKU-203ENST00000527881 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.6□□□□□ -0.236e-7■■□□□ 13.2
TSKU-203ENST00000527881 VCXQ9H320 206 aa13.6□□□□□ -0.23
TSKU-203ENST00000527881 MYH6P13533 1939 aa13.59□□□□□ -0.23
TSKU-203ENST00000527881 BCL9LQ86UU0 1499 aa13.59□□□□□ -0.23
TSKU-203ENST00000527881 FLOT1O75955 427 aa13.59□□□□□ -0.23
TSKU-203ENST00000527881 GCP02774 474 aa13.59□□□□□ -0.23
TSKU-203ENST00000527881 SCG2P13521 617 aa13.59□□□□□ -0.23
TSKU-203ENST00000527881 MRPS35P82673 323 aaKnown RBP13.59□□□□□ -0.23
TSKU-203ENST00000527881 LRRC41Q15345 812 aa13.59□□□□□ -0.23
TSKU-203ENST00000527881 CCDC6Q16204 474 aa13.59□□□□□ -0.23
TSKU-203ENST00000527881 INF2Q27J81 1249 aa13.59□□□□□ -0.23
TSKU-203ENST00000527881 PPP1R15BQ5SWA1 713 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms