RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 TBC1D10BQ4KMP7 808 aaPredicted RBP4.54□□□□□ -1.68
CSDE1-208ENST00000524652 MCTP2Q6DN12 878 aa4.54□□□□□ -1.68
CSDE1-208ENST00000524652 DENND5AQ6IQ26 1287 aa4.54□□□□□ -1.68
CSDE1-208ENST00000524652 CYP4F22Q6NT55 531 aa4.54□□□□□ -1.68
CSDE1-208ENST00000524652 STK32CQ86UX6 486 aa4.54□□□□□ -1.68
CSDE1-208ENST00000524652 TXNDC5Q8NBS9 432 aaKnown RBP4.54□□□□□ -1.68
CSDE1-208ENST00000524652 ARRDC4Q8NCT1 418 aa4.54□□□□□ -1.68
CSDE1-208ENST00000524652 KCTD13Q8WZ19 329 aa4.54□□□□□ -1.68
CSDE1-208ENST00000524652 CHAMP1Q96JM3 812 aa4.54□□□□□ -1.68
CSDE1-208ENST00000524652 LCORQ96JN0 433 aaPredicted RBP4.54□□□□□ -1.68
CSDE1-208ENST00000524652 SAMD11Q96NU1 681 aa4.54□□□□□ -1.68
CSDE1-208ENST00000524652 TINF2Q9BSI4 451 aa4.54□□□□□ -1.68
CSDE1-208ENST00000524652 C1QTNF3Q9BXJ4 246 aa4.54□□□□□ -1.68
CSDE1-208ENST00000524652 CLDND1Q9NY35 253 aa4.54□□□□□ -1.68
CSDE1-208ENST00000524652 HSPBP1Q9NZL4 362 aa4.54□□□□□ -1.68
CSDE1-208ENST00000524652 INVSQ9Y283 1065 aa4.54□□□□□ -1.68
CSDE1-208ENST00000524652 LRRC9Q6ZRR7 1453 aa4.54□□□□□ -1.68
CSDE1-208ENST00000524652 TROQ12816 1431 aaPredicted RBP4.54□□□□□ -1.68
CSDE1-208ENST00000524652 DDX3XO00571 662 aaKnown RBP eCLIP4.53□□□□□ -1.686e-27■■■□□ 18.1
CSDE1-208ENST00000524652 PPP2R2AP63151 447 aa4.53□□□□□ -1.68
CSDE1-208ENST00000524652 ARID5AQ03989 594 aa4.53□□□□□ -1.68
CSDE1-208ENST00000524652 PRAMEF18Q5VWM3 479 aa4.53□□□□□ -1.68
CSDE1-208ENST00000524652 TEPPQ6URK8 271 aa4.53□□□□□ -1.68
CSDE1-208ENST00000524652 PLEKHH3Q7Z736 793 aa4.53□□□□□ -1.68
CSDE1-208ENST00000524652 MCF2L2Q86YR7 1114 aa4.53□□□□□ -1.68
CSDE1-208ENST00000524652 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.53□□□□□ -1.68
CSDE1-208ENST00000524652 CLIC6Q96NY7 704 aa4.53□□□□□ -1.68
CSDE1-208ENST00000524652 TMEM209Q96SK2 561 aa4.53□□□□□ -1.68
CSDE1-208ENST00000524652 GPR20Q99678 358 aa4.53□□□□□ -1.68
CSDE1-208ENST00000524652 GPR27Q9NS67 375 aa4.53□□□□□ -1.68
CSDE1-208ENST00000524652 MYOTQ9UBF9 498 aa4.53□□□□□ -1.68
CSDE1-208ENST00000524652 ITSN2Q9NZM3 1697 aa4.53□□□□□ -1.68
CSDE1-208ENST00000524652 RICTORQ6R327 1708 aa4.52□□□□□ -1.69
CSDE1-208ENST00000524652 KRIT1O00522 736 aa4.52□□□□□ -1.69
CSDE1-208ENST00000524652 GRIA2P42262 883 aa4.52□□□□□ -1.69
CSDE1-208ENST00000524652 DDR2Q16832 855 aa4.52□□□□□ -1.69
CSDE1-208ENST00000524652 RSPO2Q6UXX9 243 aaPredicted RBP4.52□□□□□ -1.69
CSDE1-208ENST00000524652 TTLL11Q8NHH1 800 aa4.52□□□□□ -1.69
CSDE1-208ENST00000524652 SGSM3Q96HU1 749 aa4.52□□□□□ -1.69
CSDE1-208ENST00000524652 SSBP3Q9BWW4 388 aaPredicted RBP4.52□□□□□ -1.69
CSDE1-208ENST00000524652 KRTAP3-1Q9BYR8 98 aa4.52□□□□□ -1.69
CSDE1-208ENST00000524652 CDIP1Q9H305 208 aa4.52□□□□□ -1.69
CSDE1-208ENST00000524652 SMOC1Q9H4F8 434 aa4.52□□□□□ -1.69
CSDE1-208ENST00000524652 L2HGDHQ9H9P8 463 aa4.52□□□□□ -1.69
CSDE1-208ENST00000524652 SLC6A20Q9NP91 592 aa4.52□□□□□ -1.69
CSDE1-208ENST00000524652 R3HCC1Q9Y3T6 440 aaKnown RBP4.52□□□□□ -1.69
CSDE1-208ENST00000524652 SAMD9LQ8IVG5 1584 aa4.52□□□□□ -1.69
CSDE1-208ENST00000524652 NCOA2Q15596 1464 aa4.51□□□□□ -1.69
CSDE1-208ENST00000524652 A0A1W2PQU0 124 aa4.51□□□□□ -1.69
CSDE1-208ENST00000524652 C1QTNF3-AMACRE9PGA6 284 aa4.51□□□□□ -1.69
CSDE1-208ENST00000524652 B4GALT3O60512 393 aa4.51□□□□□ -1.69
CSDE1-208ENST00000524652 LRG1P02750 347 aa4.51□□□□□ -1.69
CSDE1-208ENST00000524652 CYP1A1P04798 512 aaPredicted RBP4.51□□□□□ -1.69
CSDE1-208ENST00000524652 INSRRP14616 1297 aa4.51□□□□□ -1.69
CSDE1-208ENST00000524652 CPZQ66K79 652 aa4.51□□□□□ -1.69
CSDE1-208ENST00000524652 TRIM48Q8IWZ4 208 aa4.51□□□□□ -1.69
CSDE1-208ENST00000524652 LOXL4Q96JB6 756 aa4.51□□□□□ -1.69
CSDE1-208ENST00000524652 ZSWIM3Q96MP5 696 aa4.51□□□□□ -1.69
CSDE1-208ENST00000524652 YTHDC1Q96MU7 727 aaKnown RBP4.51□□□□□ -1.69
CSDE1-208ENST00000524652 GMLQ99445 158 aa4.51□□□□□ -1.69
CSDE1-208ENST00000524652 IER2Q9BTL4 223 aa4.51□□□□□ -1.69
CSDE1-208ENST00000524652 TMEM168Q9H0V1 697 aa4.51□□□□□ -1.69
CSDE1-208ENST00000524652 ASH2LQ9UBL3 628 aa4.51□□□□□ -1.69
CSDE1-208ENST00000524652 FRMPD1Q5SYB0 1578 aa4.51□□□□□ -1.69
CSDE1-208ENST00000524652 SIGLEC1Q9BZZ2 1709 aa4.51□□□□□ -1.69
CSDE1-208ENST00000524652 GPATCH8Q9UKJ3 1502 aaKnown RBP4.51□□□□□ -1.69
CSDE1-208ENST00000524652 CROCC2H7BZ55 1655 aa4.51□□□□□ -1.69
CSDE1-208ENST00000524652 ZNF536O15090 1300 aa4.5□□□□□ -1.69
CSDE1-208ENST00000524652 IQCA1LA6NCM1 817 aa4.5□□□□□ -1.69
CSDE1-208ENST00000524652 LAMTOR5O43504 91 aa4.5□□□□□ -1.69
CSDE1-208ENST00000524652 DLX3O60479 287 aa4.5□□□□□ -1.69
CSDE1-208ENST00000524652 IL13P35225 146 aa4.5□□□□□ -1.69
CSDE1-208ENST00000524652 HSP90AA2PQ14568 343 aaPredicted RBP4.5□□□□□ -1.69
CSDE1-208ENST00000524652 PUM1Q14671 1186 aaKnown RBP eCLIP4.5□□□□□ -1.691e-7■□□□□ 9
CSDE1-208ENST00000524652 PKN3Q6P5Z2 889 aa4.5□□□□□ -1.69
CSDE1-208ENST00000524652 GLB1LQ6UWU2 654 aa4.5□□□□□ -1.69
CSDE1-208ENST00000524652 HNRNPLLQ8WVV9 542 aaKnown RBP4.5□□□□□ -1.69
CSDE1-208ENST00000524652 ZCCHC14Q8WYQ9 949 aaKnown RBP4.5□□□□□ -1.69
CSDE1-208ENST00000524652 MBD6Q96DN6 1003 aa4.5□□□□□ -1.69
CSDE1-208ENST00000524652 C8orf49Q96NF6 230 aa4.5□□□□□ -1.69
CSDE1-208ENST00000524652 ABCC1P33527 1531 aa4.5□□□□□ -1.69
CSDE1-208ENST00000524652 ARAP3Q8WWN8 1544 aa4.5□□□□□ -1.69
CSDE1-208ENST00000524652 ARHGEF12Q9NZN5 1544 aa4.5□□□□□ -1.69
CSDE1-208ENST00000524652 MTUS2Q5JR59 1369 aa4.5□□□□□ -1.69
CSDE1-208ENST00000524652 PHLDB1Q86UU1 1377 aa4.5□□□□□ -1.69
CSDE1-208ENST00000524652 PTPN23Q9H3S7 1636 aa4.5□□□□□ -1.69
CSDE1-208ENST00000524652 CFAP74Q9C0B2 1584 aa4.49□□□□□ -1.69
CSDE1-208ENST00000524652 PLCH2O75038 1416 aa4.49□□□□□ -1.69
CSDE1-208ENST00000524652 CD109Q6YHK3 1445 aa4.49□□□□□ -1.69
CSDE1-208ENST00000524652 PLEKHD1A6NEE1 506 aa4.49□□□□□ -1.69
CSDE1-208ENST00000524652 FGFR1P11362 822 aa4.49□□□□□ -1.69
CSDE1-208ENST00000524652 ZNF20P17024 532 aa4.49□□□□□ -1.69
CSDE1-208ENST00000524652 TNFRSF1AP19438 455 aa4.49□□□□□ -1.69
CSDE1-208ENST00000524652 DNAJA1P31689 397 aaKnown RBP4.49□□□□□ -1.69
CSDE1-208ENST00000524652 MLLT6P55198 1093 aaPredicted RBP4.49□□□□□ -1.69
CSDE1-208ENST00000524652 KIZQ2M2Z5 673 aa4.49□□□□□ -1.69
CSDE1-208ENST00000524652 ANKS3Q6ZW76 656 aa4.49□□□□□ -1.69
CSDE1-208ENST00000524652 KLHL36Q8N4N3 616 aa4.49□□□□□ -1.69
CSDE1-208ENST00000524652 CELF2-AS1Q8N7Q2 184 aa4.49□□□□□ -1.69
CSDE1-208ENST00000524652 SLC43A3Q8NBI5 491 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms