RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 GKAP1Q5VSY0 366 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-225ENST00000524141 SPTY2D1Q68D10 685 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-225ENST00000524141 CYB5D1Q6P9G0 228 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 ZNF444Q8N0Y2 327 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-225ENST00000524141 ZNF713Q8N859 430 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-225ENST00000524141 PNMA5Q96PV4 448 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 ZNF287Q9HBT7 754 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 KIF13BQ9NQT8 1826 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 ADAMTS1Q9UHI8 967 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 PACSIN2Q9UNF0 486 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-225ENST00000524141 MINPP1Q9UNW1 487 aa11.25□□□□□ -0.61
SPIDR-225ENST00000524141 EZRP15311 586 aaKnown RBP11.24□□□□□ -0.61
SPIDR-225ENST00000524141 RNASE9P60153 205 aaKnown RBP11.24□□□□□ -0.61
SPIDR-225ENST00000524141 SF3B3Q15393 1217 aaKnown RBP11.24□□□□□ -0.61
SPIDR-225ENST00000524141 TRADDQ15628 312 aa11.24□□□□□ -0.61
SPIDR-225ENST00000524141 UAP1Q16222 522 aaPredicted RBP11.24□□□□□ -0.61
SPIDR-225ENST00000524141 INTS5Q6P9B9 1019 aaKnown RBP11.24□□□□□ -0.61
SPIDR-225ENST00000524141 TRIM59Q8IWR1 403 aa11.24□□□□□ -0.61
SPIDR-225ENST00000524141 SEC16BQ96JE7 1060 aa11.24□□□□□ -0.61
SPIDR-225ENST00000524141 TMEM47Q9BQJ4 181 aa11.24□□□□□ -0.61
SPIDR-225ENST00000524141 SLITRK6Q9H5Y7 841 aa11.24□□□□□ -0.61
SPIDR-225ENST00000524141 STX8Q9UNK0 236 aa11.24□□□□□ -0.61
SPIDR-225ENST00000524141 COL4A1P02462 1669 aa11.24□□□□□ -0.61
SPIDR-225ENST00000524141 SART1O43290 800 aaKnown RBP11.24□□□□□ -0.61
SPIDR-225ENST00000524141 CHRM1P11229 460 aaPredicted RBP11.24□□□□□ -0.61
SPIDR-225ENST00000524141 ERCC3P19447 782 aa11.24□□□□□ -0.61
SPIDR-225ENST00000524141 ANXA13P27216 316 aa11.24□□□□□ -0.61
SPIDR-225ENST00000524141 PRDX5P30044 214 aa11.24□□□□□ -0.61
SPIDR-225ENST00000524141 ELF1P32519 619 aa11.24□□□□□ -0.61
SPIDR-225ENST00000524141 NBPF9Q3BBW0 867 aa11.24□□□□□ -0.61
SPIDR-225ENST00000524141 SPDYCQ5MJ68 293 aa11.24□□□□□ -0.61
SPIDR-225ENST00000524141 FAM26FQ5R3K3 315 aa11.24□□□□□ -0.61
SPIDR-225ENST00000524141 DZIP1Q86YF9 867 aaKnown RBP11.24□□□□□ -0.61
SPIDR-225ENST00000524141 FUKQ8N0W3 1084 aa11.24□□□□□ -0.61
SPIDR-225ENST00000524141 CCDC26Q8TAB7 109 aa11.24□□□□□ -0.61
SPIDR-225ENST00000524141 SNX29Q8TEQ0 813 aa11.24□□□□□ -0.61
SPIDR-225ENST00000524141 LMBR1Q8WVP7 490 aa11.24□□□□□ -0.61
SPIDR-225ENST00000524141 UBLCP1Q8WVY7 318 aaPredicted RBP11.24□□□□□ -0.61
SPIDR-225ENST00000524141 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.24□□□□□ -0.611e-7■■□□□ 11.5
SPIDR-225ENST00000524141 OSBPL7Q9BZF2 842 aa11.24□□□□□ -0.61
SPIDR-225ENST00000524141 BMP2KQ9NSY1 1161 aaPredicted RBP11.24□□□□□ -0.61
SPIDR-225ENST00000524141 A0A0G2JS52 829 aa11.23□□□□□ -0.61
SPIDR-225ENST00000524141 USP17L3A6NCW0 530 aa11.23□□□□□ -0.61
SPIDR-225ENST00000524141 USP17L4A6NCW7 530 aa11.23□□□□□ -0.61
SPIDR-225ENST00000524141 CEP104O60308 925 aa11.23□□□□□ -0.61
SPIDR-225ENST00000524141 GHRP10912 638 aa11.23□□□□□ -0.61
SPIDR-225ENST00000524141 HIBADHP31937 336 aaKnown RBP11.23□□□□□ -0.61
SPIDR-225ENST00000524141 CRKLP46109 303 aaKnown RBP11.23□□□□□ -0.61
SPIDR-225ENST00000524141 EIF3BP55884 814 aaKnown RBP11.23□□□□□ -0.61
SPIDR-225ENST00000524141 TMEM119Q4V9L6 283 aa11.23□□□□□ -0.61
SPIDR-225ENST00000524141 USP17L1Q7RTZ2 530 aa11.23□□□□□ -0.61
SPIDR-225ENST00000524141 FAM133AQ8N9E0 248 aa11.23□□□□□ -0.61
SPIDR-225ENST00000524141 TATDN2Q93075 761 aa11.23□□□□□ -0.61
SPIDR-225ENST00000524141 FBXL5Q9UKA1 691 aa11.23□□□□□ -0.61
SPIDR-225ENST00000524141 ODF2LQ9ULJ1 636 aa11.23□□□□□ -0.61
SPIDR-225ENST00000524141 MYH7BA7E2Y1 1941 aa11.23□□□□□ -0.61
SPIDR-225ENST00000524141 COASYQ13057 564 aa11.23□□□□□ -0.61
SPIDR-225ENST00000524141 XRCC4Q13426 336 aa11.23□□□□□ -0.61
SPIDR-225ENST00000524141 PACSIN1Q9BY11 444 aa11.23□□□□□ -0.61
SPIDR-225ENST00000524141 KDM4CQ9H3R0 1056 aa11.23□□□□□ -0.61
SPIDR-225ENST00000524141 FAM114A2Q9NRY5 505 aa11.23□□□□□ -0.61
SPIDR-225ENST00000524141 BCCIPQ9P287 314 aaKnown RBP eCLIP11.23□□□□□ -0.61
SPIDR-225ENST00000524141 MTMR7Q9Y216 660 aa11.23□□□□□ -0.61
SPIDR-225ENST00000524141 NOC2LQ9Y3T9 749 aaKnown RBP11.23□□□□□ -0.61
SPIDR-225ENST00000524141 ARID5AQ03989 594 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 LRRC41Q15345 812 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 PPP4R3CPQ6ZMV5 832 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 TMC3Q7Z5M5 1100 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 CPLX4Q7Z7G2 160 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 SYCE1Q8N0S2 351 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 LRRC57Q8N9N7 239 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 OR2W6PQ8NHA6 318 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 RAPGEF5Q92565 580 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 PSMD1Q99460 953 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 VEZTQ9HBM0 779 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 SUFUQ9UMX1 484 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 LEMD3Q9Y2U8 911 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 WTIPA6NIX2 430 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-225ENST00000524141 KRIT1O00522 736 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 DNAJC8O75937 253 aaPredicted RBP11.22□□□□□ -0.61
SPIDR-225ENST00000524141 FLOT1O75955 427 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 GOLGA8HP0CJ92 632 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 SCTRP47872 440 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 MRPL12P52815 198 aaKnown RBP11.22□□□□□ -0.61
SPIDR-225ENST00000524141 HOOK3Q86VS8 718 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 SEC14L1Q92503 715 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 CENPTQ96BT3 561 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 DYNLL2Q96FJ2 89 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 GANQ9H2C0 597 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 PANK4Q9NVE7 773 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 NOVA2Q9UNW9 492 aaKnown RBP11.22□□□□□ -0.61
SPIDR-225ENST00000524141 UTP11Q9Y3A2 253 aaKnown RBP11.22□□□□□ -0.61
SPIDR-225ENST00000524141 NAV1Q8NEY1 1877 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 DNM1LO00429 736 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 TMOD1P28289 359 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 QPCTQ16769 361 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 SLC4A8Q2Y0W8 1093 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 KRT71Q3SY84 523 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 VPS36Q86VN1 386 aa11.22□□□□□ -0.61
SPIDR-225ENST00000524141 CCDC65Q8IXS2 484 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms