RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 KATNBL1Q9H079 304 aa4.79□□□□□ -1.64
PCM1-217ENST00000522998 ARHGAP20Q9P2F6 1191 aa4.79□□□□□ -1.64
PCM1-217ENST00000522998 DDX41Q9UJV9 622 aaKnown RBP4.79□□□□□ -1.64
PCM1-217ENST00000522998 PTPN22Q9Y2R2 807 aa4.79□□□□□ -1.64
PCM1-217ENST00000522998 H0Y858 1186 aa4.78□□□□□ -1.64
PCM1-217ENST00000522998 SCG5P05408 212 aa4.78□□□□□ -1.64
PCM1-217ENST00000522998 ZNF888P0CJ79 500 aaPredicted RBP4.78□□□□□ -1.64
PCM1-217ENST00000522998 CR2P20023 1033 aa4.78□□□□□ -1.64
PCM1-217ENST00000522998 HNRNPA0Q13151 305 aaKnown RBP4.78□□□□□ -1.64
PCM1-217ENST00000522998 NCAPHQ15003 741 aa4.78□□□□□ -1.64
PCM1-217ENST00000522998 KREMEN2Q8NCW0 462 aa4.78□□□□□ -1.64
PCM1-217ENST00000522998 KCND1Q9NSA2 647 aa4.78□□□□□ -1.64
PCM1-217ENST00000522998 OAZ3Q9UMX2 235 aa4.78□□□□□ -1.64
PCM1-217ENST00000522998 SLC30A1Q9Y6M5 507 aa4.78□□□□□ -1.64
PCM1-217ENST00000522998 SLC27A2O14975 620 aa4.77□□□□□ -1.65
PCM1-217ENST00000522998 U2SURPO15042 1029 aaKnown RBP4.77□□□□□ -1.65
PCM1-217ENST00000522998 TBX1O43435 398 aa4.77□□□□□ -1.65
PCM1-217ENST00000522998 CPP00450 1065 aa4.77□□□□□ -1.65
PCM1-217ENST00000522998 ACRV1P26436 265 aa4.77□□□□□ -1.65
PCM1-217ENST00000522998 KCNJ6P48051 423 aa4.77□□□□□ -1.65
PCM1-217ENST00000522998 TUBA3CQ13748 450 aa4.77□□□□□ -1.65
PCM1-217ENST00000522998 PRSS53Q2L4Q9 553 aa4.77□□□□□ -1.65
PCM1-217ENST00000522998 DPY19L2P1Q6NXN4 242 aa4.77□□□□□ -1.65
PCM1-217ENST00000522998 TUBA3EQ6PEY2 450 aa4.77□□□□□ -1.65
PCM1-217ENST00000522998 MAMDC4Q6UXC1 1216 aa4.77□□□□□ -1.65
PCM1-217ENST00000522998 MRGPRGQ86SM5 289 aa4.77□□□□□ -1.65
PCM1-217ENST00000522998 LARP4BQ92615 738 aaKnown RBP4.77□□□□□ -1.65
PCM1-217ENST00000522998 SHDQ96IW2 340 aa4.77□□□□□ -1.65
PCM1-217ENST00000522998 CCDC140Q96MF4 163 aa4.77□□□□□ -1.65
PCM1-217ENST00000522998 OR14A2Q96R54 314 aa4.77□□□□□ -1.65
PCM1-217ENST00000522998 CARD11Q9BXL7 1154 aa4.77□□□□□ -1.65
PCM1-217ENST00000522998 BACH2Q9BYV9 841 aa4.77□□□□□ -1.65
PCM1-217ENST00000522998 MMRN2Q9H8L6 949 aa4.77□□□□□ -1.65
PCM1-217ENST00000522998 CDC14BO60729 498 aa4.76□□□□□ -1.65
PCM1-217ENST00000522998 ITGAVP06756 1048 aa4.76□□□□□ -1.65
PCM1-217ENST00000522998 MAKP20794 623 aa4.76□□□□□ -1.65
PCM1-217ENST00000522998 FNDC7Q5VTL7 733 aa4.76□□□□□ -1.65
PCM1-217ENST00000522998 ZNF654Q8IZM8 581 aa4.76□□□□□ -1.65
PCM1-217ENST00000522998 PIP4K2CQ8TBX8 421 aa4.76□□□□□ -1.65
PCM1-217ENST00000522998 ZNF483Q8TF39 744 aaPredicted RBP4.76□□□□□ -1.65
PCM1-217ENST00000522998 CPLX3Q8WVH0 158 aa4.76□□□□□ -1.65
PCM1-217ENST00000522998 CLEC4DQ8WXI8 215 aa4.76□□□□□ -1.65
PCM1-217ENST00000522998 PCSK5Q92824 1860 aa4.76□□□□□ -1.65
PCM1-217ENST00000522998 GPRASP2Q96D09 838 aa4.76□□□□□ -1.65
PCM1-217ENST00000522998 AGAP2Q99490 1192 aa4.76□□□□□ -1.65
PCM1-217ENST00000522998 DPYSL5Q9BPU6 564 aa4.76□□□□□ -1.65
PCM1-217ENST00000522998 SLC6A20Q9NP91 592 aa4.76□□□□□ -1.65
PCM1-217ENST00000522998 LRP2BPQ9P2M1 347 aa4.76□□□□□ -1.65
PCM1-217ENST00000522998 ENO2P09104 434 aaPredicted RBP4.75□□□□□ -1.65
PCM1-217ENST00000522998 FAHP16930 419 aa4.75□□□□□ -1.65
PCM1-217ENST00000522998 PFKPQ01813 784 aa4.75□□□□□ -1.65
PCM1-217ENST00000522998 SF1Q15637 639 aaKnown RBP4.75□□□□□ -1.65
PCM1-217ENST00000522998 RNF151Q2KHN1 245 aa4.75□□□□□ -1.65
PCM1-217ENST00000522998 PAN2Q504Q3 1202 aaKnown RBP4.75□□□□□ -1.65
PCM1-217ENST00000522998 ZNF227Q86WZ6 799 aa4.75□□□□□ -1.65
PCM1-217ENST00000522998 RASGRP4Q8TDF6 673 aa4.75□□□□□ -1.65
PCM1-217ENST00000522998 DMRT1Q9Y5R6 373 aa4.75□□□□□ -1.65
PCM1-217ENST00000522998 LMO1P25800 156 aa4.74□□□□□ -1.65
PCM1-217ENST00000522998 POLD1P28340 1107 aa4.74□□□□□ -1.65
PCM1-217ENST00000522998 NASPP49321 788 aaPredicted RBP4.74□□□□□ -1.65
PCM1-217ENST00000522998 TUSC3Q13454 348 aa4.74□□□□□ -1.65
PCM1-217ENST00000522998 SV2CQ496J9 727 aa4.74□□□□□ -1.65
PCM1-217ENST00000522998 CD276Q5ZPR3 534 aa4.74□□□□□ -1.65
PCM1-217ENST00000522998 DENND5AQ6IQ26 1287 aa4.74□□□□□ -1.65
PCM1-217ENST00000522998 RBM12BQ8IXT5 1001 aaKnown RBP4.74□□□□□ -1.65
PCM1-217ENST00000522998 ZNF808Q8N4W9 903 aaPredicted RBP4.74□□□□□ -1.65
PCM1-217ENST00000522998 FAM169BQ8N8A8 192 aa4.74□□□□□ -1.65
PCM1-217ENST00000522998 TMEM145Q8NBT3 493 aa4.74□□□□□ -1.65
PCM1-217ENST00000522998 VOPP1Q96AW1 172 aa4.74□□□□□ -1.65
PCM1-217ENST00000522998 TACO1Q9BSH4 297 aaKnown RBP4.74□□□□□ -1.65
PCM1-217ENST00000522998 JAM3Q9BX67 310 aa4.74□□□□□ -1.65
PCM1-217ENST00000522998 PLA2G12BQ9BX93 195 aa4.74□□□□□ -1.65
PCM1-217ENST00000522998 CDIP1Q9H305 208 aa4.74□□□□□ -1.65
PCM1-217ENST00000522998 C12orf65Q9H3J6 166 aaKnown RBP4.74□□□□□ -1.65
PCM1-217ENST00000522998 ZNF839A8K0R7 811 aa4.73□□□□□ -1.65
PCM1-217ENST00000522998 CUTAO60888 179 aa4.73□□□□□ -1.65
PCM1-217ENST00000522998 RAMP2O60895 175 aa4.73□□□□□ -1.65
PCM1-217ENST00000522998 IL18BPO95998 194 aa4.73□□□□□ -1.65
PCM1-217ENST00000522998 DNAJA1P31689 397 aaKnown RBP4.73□□□□□ -1.65
PCM1-217ENST00000522998 RRADP55042 308 aa4.73□□□□□ -1.65
PCM1-217ENST00000522998 GFRA1P56159 465 aa4.73□□□□□ -1.65
PCM1-217ENST00000522998 ZMAT1Q5H9K5 638 aa4.73□□□□□ -1.65
PCM1-217ENST00000522998 ZNF627Q7L945 461 aa4.73□□□□□ -1.65
PCM1-217ENST00000522998 REXO2Q9Y3B8 237 aaKnown RBP4.73□□□□□ -1.65
PCM1-217ENST00000522998 NR2E1Q9Y466 385 aa4.73□□□□□ -1.65
PCM1-217ENST00000522998 NUB1Q9Y5A7 615 aa4.73□□□□□ -1.65
PCM1-217ENST00000522998 LTFP02788 710 aa4.72□□□□□ -1.65
PCM1-217ENST00000522998 HIBADHP31937 336 aaKnown RBP4.72□□□□□ -1.65
PCM1-217ENST00000522998 RPS19P39019 145 aaKnown RBP4.72□□□□□ -1.65
PCM1-217ENST00000522998 DUSP8Q13202 625 aa4.72□□□□□ -1.65
PCM1-217ENST00000522998 NOLC1Q14978 699 aaKnown RBP eCLIP4.72□□□□□ -1.65
PCM1-217ENST00000522998 PCSK4Q6UW60 755 aa4.72□□□□□ -1.65
PCM1-217ENST00000522998 SCUBE1Q8IWY4 988 aa4.72□□□□□ -1.65
PCM1-217ENST00000522998 CLIP3Q96DZ5 547 aa4.72□□□□□ -1.65
PCM1-217ENST00000522998 PRRX2Q99811 253 aa4.72□□□□□ -1.65
PCM1-217ENST00000522998 TLR9Q9NR96 1032 aa4.72□□□□□ -1.65
PCM1-217ENST00000522998 AURKAIP1Q9NWT8 199 aaPredicted RBP4.72□□□□□ -1.65
PCM1-217ENST00000522998 NPFFR2Q9Y5X5 522 aa4.72□□□□□ -1.65
PCM1-217ENST00000522998 ESYT3A0FGR9 886 aa4.71□□□□□ -1.66
PCM1-217ENST00000522998 MATN2O00339 956 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms