RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	CDKL2	Q92772	493 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	PPP1R13B	Q96KQ4	1090 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	SPATA31A5	Q5VU36	1347 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	SPATA31A7	Q8IWB4	1347 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	ATP6V1E1	P36543	226 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	LONP1	P36776	959 aa	Known RBP	11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	STAT1	P42224	750 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	PTPRO	Q16827	1216 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	CCDC38	Q502W7	563 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	USP50	Q70EL3	339 aa	Predicted RBP	11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	SOCS4	Q8WXH5	440 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	PHKB	Q93100	1093 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	DISC1	Q9NRI5	854 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	NKIRAS1	Q9NYS0	192 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	PCDHB7	Q9Y5E2	793 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	SYNGAP1	Q96PV0	1343 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	PTPRM	P28827	1452 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	CCDC151	A5D8V7	595 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	KIAA0391	O15091	583 aa	Known RBP	11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	NKRF	O15226	690 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	NOL3	O60936	208 aa	Known RBP	11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	ZNF853	P0CG23	659 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	CCT5	P48643	541 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	FAM182B	Q5T319	152 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	ANO1	Q5XXA6	986 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	INTS8	Q75QN2	995 aa	Known RBP	11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	RNF168	Q8IYW5	571 aa	Predicted RBP	11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	STAG1	Q8WVM7	1258 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	PSPC1	Q8WXF1	523 aa	Known RBP	11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	COLEC11	Q9BWP8	271 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	NFU1	Q9UMS0	254 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	ABCC4	O15439	1325 aa		11.19	□□□□□ -0.62
TCF7-223	ENST00000522653	KIF3C	O14782	793 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	SEC31A	O94979	1220 aa	Known RBP	11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	KCNH2	Q12809	1159 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	PAK2	Q13177	524 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	KIAA1755	Q5JYT7	1200 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	DCP1B	Q8IZD4	617 aa	Known RBP	11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	MIPOL1	Q8TD10	442 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	PPP2R2C	Q9Y2T4	447 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	IQGAP3	Q86VI3	1631 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	ADCY9	O60503	1353 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	SGSM2	O43147	1006 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	CYP4A11	Q02928	519 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	MAPK6	Q16659	721 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	CNTNAP4	Q9C0A0	1308 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	ERCC6L2	Q5T890	1561 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	PRAMEF22	A3QJZ6	481 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	MAN1A1	P33908	653 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	XRRA1	Q6P2D8	792 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	NME8	Q8N427	588 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	RGS12	O14924	1447 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	MYL1	P05976	194 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	CPB1	P15086	417 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	SLC10A5	Q5PT55	438 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	SCYL2	Q6P3W7	929 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	TRMT2A	Q8IZ69	625 aa	Known RBP	11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	UBLCP1	Q8WVY7	318 aa	Predicted RBP	11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	ZNF274	Q96GC6	653 aa	Predicted RBP	11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	RIC8A	Q9NPQ8	531 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	TET3	O43151	1660 aa		11.18	□□□□□ -0.62
TCF7-223	ENST00000522653	BFSP1	Q12934	665 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	GTF2H3	Q13889	308 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	MEI1	Q5TIA1	1274 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	FAM173B	Q6P4H8	233 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	FANCB	Q8NB91	859 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	GDAP1	Q8TB36	358 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	CD209	Q9NNX6	404 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	ITM2B	Q9Y287	266 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	TNKS	O95271	1327 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	SPDYE2B	A6NHP3	402 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	CCDC85C	A6NKD9	419 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	APOE	P02649	317 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	SPDYE6	P0CI01	402 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	KRT3	P12035	628 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	FYB2	Q5VWT5	728 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	KRT40	Q6A162	431 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	CASC4	Q6P4E1	433 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	GLB1L	Q6UWU2	654 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	NOP9	Q86U38	636 aa	Known RBP	11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	SAMD3	Q8N6K7	520 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	ZNF280C	Q8ND82	737 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	STMN2	Q93045	179 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	ZNF302	Q9NR11	478 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	TMEM247	A6NEH6	219 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	PEX19	P40855	299 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	NSF	P46459	744 aa	Known RBP	11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	NOG	Q13253	232 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	ZKSCAN8	Q15776	578 aa	Predicted RBP	11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	DHX38	Q92620	1227 aa	Known RBP	11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	OPTN	Q96CV9	577 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	CCDC51	Q96ER9	411 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	PANK4	Q9NVE7	773 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	MOSPD1	Q9UJG1	213 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	INPP5F	Q9Y2H2	1132 aa		11.17	□□□□□ -0.62
TCF7-223	ENST00000522653	USH1C	Q9Y6N9	552 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms