RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 LNPKQ9C0E8 428 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 IRF2BPLQ9H1B7 796 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 RNPEPQ9H4A4 650 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 GPCPD1Q9NPB8 672 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 CDH22Q9UJ99 828 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 TELO2Q9Y4R8 837 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 MYH15Q9Y2K3 1946 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 CHD8Q9HCK8 2581 aa9.38□□□□□ -0.91
CSMD1-209ENST00000520630 WDR19Q8NEZ3 1342 aa9.37□□□□□ -0.91
CSMD1-209ENST00000520630 OPLAHO14841 1288 aa9.37□□□□□ -0.91
CSMD1-209ENST00000520630 SORBS3O60504 671 aa9.37□□□□□ -0.91
CSMD1-209ENST00000520630 CHRNA1P02708 482 aa9.37□□□□□ -0.91
CSMD1-209ENST00000520630 CTSHP09668 335 aa9.37□□□□□ -0.91
CSMD1-209ENST00000520630 FGRP09769 529 aa9.37□□□□□ -0.91
CSMD1-209ENST00000520630 PDHBP11177 359 aa9.37□□□□□ -0.91
CSMD1-209ENST00000520630 NRIP1P48552 1158 aa9.37□□□□□ -0.91
CSMD1-209ENST00000520630 CCDC96Q2M329 555 aa9.37□□□□□ -0.91
CSMD1-209ENST00000520630 FAM26DQ5JW98 314 aa9.37□□□□□ -0.91
CSMD1-209ENST00000520630 TSHZ3Q63HK5 1081 aa9.37□□□□□ -0.91
CSMD1-209ENST00000520630 RTN4RL1Q86UN2 441 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-209ENST00000520630 RGS22Q8NE09 1264 aa9.37□□□□□ -0.91
CSMD1-209ENST00000520630 S1PR5Q9H228 398 aa9.37□□□□□ -0.91
CSMD1-209ENST00000520630 EHMT1Q9H9B1 1298 aa9.37□□□□□ -0.91
CSMD1-209ENST00000520630 MRPL42Q9Y6G3 142 aaKnown RBP9.37□□□□□ -0.91
CSMD1-209ENST00000520630 SALL3Q9BXA9 1300 aa9.36□□□□□ -0.91
CSMD1-209ENST00000520630 ENPP3O14638 875 aa9.36□□□□□ -0.91
CSMD1-209ENST00000520630 DGKIO75912 1065 aa9.36□□□□□ -0.91
CSMD1-209ENST00000520630 BRD1O95696 1058 aa9.36□□□□□ -0.91
CSMD1-209ENST00000520630 SMIM10L2AP0DMW4 78 aa9.36□□□□□ -0.91
CSMD1-209ENST00000520630 SMIM10L2BP0DMW5 78 aa9.36□□□□□ -0.91
CSMD1-209ENST00000520630 SNHG28P0DPA3 235 aa9.36□□□□□ -0.91
CSMD1-209ENST00000520630 ATF7P17544 494 aaPredicted RBP9.36□□□□□ -0.91
CSMD1-209ENST00000520630 NUBP1P53384 320 aa9.36□□□□□ -0.91
CSMD1-209ENST00000520630 USH1GQ495M9 461 aa9.36□□□□□ -0.91
CSMD1-209ENST00000520630 RBM23Q86U06 439 aaKnown RBP9.36□□□□□ -0.91
CSMD1-209ENST00000520630 ATP6V0A1Q93050 837 aa9.36□□□□□ -0.91
CSMD1-209ENST00000520630 P2RX5Q93086 422 aa9.36□□□□□ -0.91
CSMD1-209ENST00000520630 CNTNAP3BQ96NU0 1288 aa9.36□□□□□ -0.91
CSMD1-209ENST00000520630 KATNAL1Q9BW62 490 aa9.36□□□□□ -0.91
CSMD1-209ENST00000520630 CNTNAP3Q9BZ76 1288 aa9.36□□□□□ -0.91
CSMD1-209ENST00000520630 LRRCC1Q9C099 1032 aa9.36□□□□□ -0.91
CSMD1-209ENST00000520630 ZNF287Q9HBT7 754 aa9.36□□□□□ -0.91
CSMD1-209ENST00000520630 TSPY2A6NKD2 308 aa9.35□□□□□ -0.91
CSMD1-209ENST00000520630 PER2O15055 1255 aa9.35□□□□□ -0.91
CSMD1-209ENST00000520630 KDM4AO75164 1064 aa9.35□□□□□ -0.91
CSMD1-209ENST00000520630 PPFIA4O75335 1185 aa9.35□□□□□ -0.91
CSMD1-209ENST00000520630 APPP05067 770 aa9.35□□□□□ -0.91
CSMD1-209ENST00000520630 GNAT2P19087 354 aa9.35□□□□□ -0.91
CSMD1-209ENST00000520630 ZNF543Q08ER8 600 aa9.35□□□□□ -0.91
CSMD1-209ENST00000520630 MGAT3Q09327 533 aa9.35□□□□□ -0.91
CSMD1-209ENST00000520630 LAMC2Q13753 1193 aa9.35□□□□□ -0.91
CSMD1-209ENST00000520630 CELF3Q5SZQ8 465 aaKnown RBP9.35□□□□□ -0.91
CSMD1-209ENST00000520630 SYCE2Q6PIF2 218 aa9.35□□□□□ -0.91
CSMD1-209ENST00000520630 PLEKHM2Q8IWE5 1019 aa9.35□□□□□ -0.91
CSMD1-209ENST00000520630 DHX37Q8IY37 1157 aaKnown RBP9.35□□□□□ -0.91
CSMD1-209ENST00000520630 KLHL23Q8NBE8 558 aa9.35□□□□□ -0.91
CSMD1-209ENST00000520630 IL31RAQ8NI17 732 aa9.35□□□□□ -0.91
CSMD1-209ENST00000520630 FEZF2Q8TBJ5 459 aa9.35□□□□□ -0.91
CSMD1-209ENST00000520630 OTUD7AQ8TE49 926 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-209ENST00000520630 POF1BQ8WVV4 589 aa9.35□□□□□ -0.91
CSMD1-209ENST00000520630 ZFP91Q96JP5 570 aaPredicted RBP9.35□□□□□ -0.91
CSMD1-209ENST00000520630 PLVAPQ9BX97 442 aa9.35□□□□□ -0.91
CSMD1-209ENST00000520630 ASPMQ8IZT6 3477 aa9.34□□□□□ -0.91
CSMD1-209ENST00000520630 C17orf102A2RUQ5 167 aa9.34□□□□□ -0.91
CSMD1-209ENST00000520630 NR3C2P08235 984 aa9.34□□□□□ -0.91
CSMD1-209ENST00000520630 EIF2AK2P19525 551 aaKnown RBP9.34□□□□□ -0.91
CSMD1-209ENST00000520630 GATMP50440 423 aa9.34□□□□□ -0.91
CSMD1-209ENST00000520630 LPIN1Q14693 890 aa9.34□□□□□ -0.91
CSMD1-209ENST00000520630 STXBP2Q15833 593 aa9.34□□□□□ -0.91
CSMD1-209ENST00000520630 VPS53Q5VIR6 699 aa9.34□□□□□ -0.91
CSMD1-209ENST00000520630 CWF19L1Q69YN2 538 aaKnown RBP9.34□□□□□ -0.91
CSMD1-209ENST00000520630 KREMEN2Q8NCW0 462 aa9.34□□□□□ -0.91
CSMD1-209ENST00000520630 NSUN6Q8TEA1 469 aaKnown RBP9.34□□□□□ -0.91
CSMD1-209ENST00000520630 NKD2Q969F2 451 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-209ENST00000520630 IWS1Q96ST2 819 aa9.34□□□□□ -0.91
CSMD1-209ENST00000520630 RMDN3Q96TC7 470 aa9.34□□□□□ -0.91
CSMD1-209ENST00000520630 PXMP2Q9NR77 195 aa9.34□□□□□ -0.91
CSMD1-209ENST00000520630 SETD4Q9NVD3 440 aa9.34□□□□□ -0.91
CSMD1-209ENST00000520630 ANAPC4Q9UJX5 808 aa9.34□□□□□ -0.91
CSMD1-209ENST00000520630 RWDD3Q9Y3V2 267 aa9.34□□□□□ -0.91
CSMD1-209ENST00000520630 COL4A3Q01955 1670 aa9.33□□□□□ -0.92
CSMD1-209ENST00000520630 GPR179Q6PRD1 2367 aa9.33□□□□□ -0.92
CSMD1-209ENST00000520630 H3BRB1 525 aa9.33□□□□□ -0.92
CSMD1-209ENST00000520630 PI15O43692 258 aa9.33□□□□□ -0.92
CSMD1-209ENST00000520630 ORC4O43929 436 aa9.33□□□□□ -0.92
CSMD1-209ENST00000520630 RANBP6O60518 1105 aaKnown RBP9.33□□□□□ -0.92
CSMD1-209ENST00000520630 CAND2O75155 1236 aa9.33□□□□□ -0.92
CSMD1-209ENST00000520630 EIF3JO75822 258 aaKnown RBP9.33□□□□□ -0.92
CSMD1-209ENST00000520630 GGPS1O95749 300 aa9.33□□□□□ -0.92
CSMD1-209ENST00000520630 LGALS2P05162 132 aa9.33□□□□□ -0.92
CSMD1-209ENST00000520630 GOLGA8HP0CJ92 632 aa9.33□□□□□ -0.92
CSMD1-209ENST00000520630 TOP1P11387 765 aaKnown RBP9.33□□□□□ -0.92
CSMD1-209ENST00000520630 UBA1P22314 1058 aaKnown RBP9.33□□□□□ -0.92
CSMD1-209ENST00000520630 SP100P23497 879 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-209ENST00000520630 ERVFC1P60507 584 aa9.33□□□□□ -0.92
CSMD1-209ENST00000520630 BTG3Q14201 252 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-209ENST00000520630 ZMYM1Q5SVZ6 1142 aa9.33□□□□□ -0.92
CSMD1-209ENST00000520630 RUFY4Q6ZNE9 571 aa9.33□□□□□ -0.92
CSMD1-209ENST00000520630 APBB2Q92870 758 aa9.33□□□□□ -0.92
CSMD1-209ENST00000520630 MPHOSPH6Q99547 160 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms