RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 LRRC53A6NM62 1247 aa28.46■■■□□ 2.15
COL13A1-213ENST00000520267 IPO7O95373 1038 aaKnown RBP28.46■■■□□ 2.15
COL13A1-213ENST00000520267 RRAGAQ7L523 313 aa28.46■■■□□ 2.15
COL13A1-213ENST00000520267 KRT86O43790 486 aa28.46■■■□□ 2.15
COL13A1-213ENST00000520267 TBC1D12O60347 775 aa28.46■■■□□ 2.15
COL13A1-213ENST00000520267 KIF20AO95235 890 aa28.46■■■□□ 2.15
COL13A1-213ENST00000520267 TRAF1Q13077 416 aa28.46■■■□□ 2.15
COL13A1-213ENST00000520267 WHAMMP3Q1A5X7 153 aa28.46■■■□□ 2.15
COL13A1-213ENST00000520267 KRT26Q7Z3Y9 468 aa28.46■■■□□ 2.15
COL13A1-213ENST00000520267 CHURC1Q8WUH1 139 aa28.46■■■□□ 2.15
COL13A1-213ENST00000520267 GLIS2Q9BZE0 524 aaPredicted RBP28.46■■■□□ 2.15
COL13A1-213ENST00000520267 RGL1Q9NZL6 768 aa28.46■■■□□ 2.15
COL13A1-213ENST00000520267 ENC1O14682 589 aa28.45■■■□□ 2.15
COL13A1-213ENST00000520267 FKBP1CQ5VVH2 108 aa28.45■■■□□ 2.15
COL13A1-213ENST00000520267 GPIHBP1Q8IV16 184 aa28.45■■■□□ 2.15
COL13A1-213ENST00000520267 ZC3H3Q8IXZ2 948 aaKnown RBP28.45■■■□□ 2.15
COL13A1-213ENST00000520267 NEK11Q8NG66 645 aa28.45■■■□□ 2.15
COL13A1-213ENST00000520267 POLR3CQ9BUI4 534 aaPredicted RBP28.45■■■□□ 2.15
COL13A1-213ENST00000520267 DUSP10Q9Y6W6 482 aa28.45■■■□□ 2.15
COL13A1-213ENST00000520267 GCOM1H8Y6P7 765 aaPredicted RBP28.45■■■□□ 2.14
COL13A1-213ENST00000520267 POLR2MP0CAP2 368 aa28.45■■■□□ 2.14
COL13A1-213ENST00000520267 PNMA6AP0CW24 399 aaPredicted RBP28.45■■■□□ 2.14
COL13A1-213ENST00000520267 SAMD1Q6SPF0 538 aaPredicted RBP28.45■■■□□ 2.14
COL13A1-213ENST00000520267 SFR1Q86XK3 245 aa28.45■■■□□ 2.14
COL13A1-213ENST00000520267 TRIM59Q8IWR1 403 aa28.45■■■□□ 2.14
COL13A1-213ENST00000520267 ZNRF3Q9ULT6 936 aa28.45■■■□□ 2.14
COL13A1-213ENST00000520267 GNA14O95837 355 aa28.44■■■□□ 2.14
COL13A1-213ENST00000520267 CAP2P40123 477 aa28.44■■■□□ 2.14
COL13A1-213ENST00000520267 MARSP56192 900 aaKnown RBP28.44■■■□□ 2.14
COL13A1-213ENST00000520267 UBXN2AP68543 259 aa28.44■■■□□ 2.14
COL13A1-213ENST00000520267 ZMYND15Q9H091 742 aa28.44■■■□□ 2.14
COL13A1-213ENST00000520267 BHMT2Q9H2M3 363 aa28.44■■■□□ 2.14
COL13A1-213ENST00000520267 VAV2P52735 878 aa28.44■■■□□ 2.14
COL13A1-213ENST00000520267 ADAM9Q13443 819 aa28.44■■■□□ 2.14
COL13A1-213ENST00000520267 TRAPPC11Q7Z392 1133 aa28.44■■■□□ 2.14
COL13A1-213ENST00000520267 MTMR14Q8NCE2 650 aa28.44■■■□□ 2.14
COL13A1-213ENST00000520267 FBXO28Q9NVF7 368 aa28.44■■■□□ 2.14
COL13A1-213ENST00000520267 HDAC6Q9UBN7 1215 aa28.44■■■□□ 2.14
COL13A1-213ENST00000520267 PGAP2Q9UHJ9 254 aa28.44■■■□□ 2.14
COL13A1-213ENST00000520267 RSPH10B2B2RC85 870 aa28.43■■■□□ 2.14
COL13A1-213ENST00000520267 ATP1A1P05023 1023 aaKnown RBP28.43■■■□□ 2.14
COL13A1-213ENST00000520267 RSPH10BP0C881 870 aa28.43■■■□□ 2.14
COL13A1-213ENST00000520267 EIF4A3P38919 411 aaKnown RBP28.43■■■□□ 2.14
COL13A1-213ENST00000520267 CC2D1AQ6P1N0 951 aaPredicted RBP28.43■■■□□ 2.14
COL13A1-213ENST00000520267 PDXDC1Q6P996 788 aa28.43■■■□□ 2.14
COL13A1-213ENST00000520267 FAM83AQ86UY5 434 aa28.43■■■□□ 2.14
COL13A1-213ENST00000520267 NIM1KQ8IY84 436 aa28.43■■■□□ 2.14
COL13A1-213ENST00000520267 AGBL3Q8NEM8 1001 aa28.43■■■□□ 2.14
COL13A1-213ENST00000520267 ANKZF1Q9H8Y5 726 aa28.43■■■□□ 2.14
COL13A1-213ENST00000520267 OTOP1Q7RTM1 612 aa28.43■■■□□ 2.14
COL13A1-213ENST00000520267 PURBQ96QR8 312 aaKnown RBP28.43■■■□□ 2.14
COL13A1-213ENST00000520267 RUSC1Q9BVN2 902 aa28.43■■■□□ 2.14
COL13A1-213ENST00000520267 BCAS3Q9H6U6 928 aa28.43■■■□□ 2.14
COL13A1-213ENST00000520267 POLD4Q9HCU8 107 aa28.43■■■□□ 2.14
COL13A1-213ENST00000520267 HOXD13P35453 343 aa28.42■■■□□ 2.14
COL13A1-213ENST00000520267 KIF11P52732 1056 aa28.42■■■□□ 2.14
COL13A1-213ENST00000520267 SPA17Q15506 151 aa28.42■■■□□ 2.14
COL13A1-213ENST00000520267 EDRF1Q3B7T1 1238 aa28.42■■■□□ 2.14
COL13A1-213ENST00000520267 PPP4R3CPQ6ZMV5 832 aa28.42■■■□□ 2.14
COL13A1-213ENST00000520267 EPM2AIP1Q7L775 607 aaPredicted RBP28.42■■■□□ 2.14
COL13A1-213ENST00000520267 CACNA2D4Q7Z3S7 1137 aa28.42■■■□□ 2.14
COL13A1-213ENST00000520267 ZFP91Q96JP5 570 aaPredicted RBP28.42■■■□□ 2.14
COL13A1-213ENST00000520267 UTP18Q9Y5J1 556 aaKnown RBP eCLIP28.42■■■□□ 2.14
COL13A1-213ENST00000520267 NOL4O94818 638 aa28.41■■■□□ 2.14
COL13A1-213ENST00000520267 EYA4O95677 639 aa28.41■■■□□ 2.14
COL13A1-213ENST00000520267 MYBP10242 640 aa28.41■■■□□ 2.14
COL13A1-213ENST00000520267 CTTNQ14247 550 aaKnown RBP28.41■■■□□ 2.14
COL13A1-213ENST00000520267 NBPF9Q3BBW0 867 aa28.41■■■□□ 2.14
COL13A1-213ENST00000520267 EHBP1Q8NDI1 1231 aa28.41■■■□□ 2.14
COL13A1-213ENST00000520267 EDEM3Q9BZQ6 932 aa28.41■■■□□ 2.14
COL13A1-213ENST00000520267 MRPL11Q9Y3B7 192 aaKnown RBP28.41■■■□□ 2.14
COL13A1-213ENST00000520267 RABGAP1Q9Y3P9 1069 aa28.41■■■□□ 2.14
COL13A1-213ENST00000520267 CTAGE15A4D2H0 777 aa28.41■■■□□ 2.14
COL13A1-213ENST00000520267 PLA2G6O60733 806 aa28.41■■■□□ 2.14
COL13A1-213ENST00000520267 PSMD10O75832 226 aa28.41■■■□□ 2.14
COL13A1-213ENST00000520267 CTAGE8P0CG41 777 aa28.41■■■□□ 2.14
COL13A1-213ENST00000520267 CXCL9Q07325 125 aa28.41■■■□□ 2.14
COL13A1-213ENST00000520267 CTAGE6Q86UF2 777 aa28.41■■■□□ 2.14
COL13A1-213ENST00000520267 FAM160B2Q86V87 743 aa28.41■■■□□ 2.14
COL13A1-213ENST00000520267 CTAGE4Q8IX94 777 aa28.41■■■□□ 2.14
COL13A1-213ENST00000520267 HSD17B14Q9BPX1 270 aa28.41■■■□□ 2.14
COL13A1-213ENST00000520267 SCAF8Q9UPN6 1271 aaKnown RBP28.41■■■□□ 2.14
COL13A1-213ENST00000520267 PCDHA13Q9Y5I0 950 aa28.41■■■□□ 2.14
COL13A1-213ENST00000520267 ATAD5Q96QE3 1844 aa28.41■■■□□ 2.14
COL13A1-213ENST00000520267 RBBP6Q7Z6E9 1792 aaKnown RBP28.41■■■□□ 2.14
COL13A1-213ENST00000520267 KIF5AQ12840 1032 aa28.4■■■□□ 2.14
COL13A1-213ENST00000520267 LRCH2Q5VUJ6 765 aa28.4■■■□□ 2.14
COL13A1-213ENST00000520267 TEX2Q8IWB9 1127 aa28.4■■■□□ 2.14
COL13A1-213ENST00000520267 ZBED3Q96IU2 234 aaPredicted RBP28.4■■■□□ 2.14
COL13A1-213ENST00000520267 LSM14BQ9BX40 385 aaKnown RBP28.4■■■□□ 2.14
COL13A1-213ENST00000520267 VPS33BQ9H267 617 aa28.4■■■□□ 2.14
COL13A1-213ENST00000520267 NLRC4Q9NPP4 1024 aa28.4■■■□□ 2.14
COL13A1-213ENST00000520267 MACROD2A1Z1Q3 448 aa28.4■■■□□ 2.14
COL13A1-213ENST00000520267 CETN3O15182 167 aa28.4■■■□□ 2.14
COL13A1-213ENST00000520267 CHMP2AO43633 222 aa28.4■■■□□ 2.14
COL13A1-213ENST00000520267 PRPF6O94906 941 aaKnown RBP28.4■■■□□ 2.14
COL13A1-213ENST00000520267 LCA5LO95447 670 aa28.4■■■□□ 2.14
COL13A1-213ENST00000520267 NR2F2P24468 414 aa28.4■■■□□ 2.14
COL13A1-213ENST00000520267 KNOP1Q1ED39 458 aaKnown RBP28.4■■■□□ 2.14
COL13A1-213ENST00000520267 PAPD7Q5XG87 772 aaKnown RBP28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms