RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 GSDMAQ96QA5 445 aa5.73□□□□□ -1.49
SDC2-204ENST00000519914 SRRTQ9BXP5 876 aaKnown RBP5.73□□□□□ -1.49
SDC2-204ENST00000519914 CRNKL1Q9BZJ0 848 aaKnown RBP5.73□□□□□ -1.49
SDC2-204ENST00000519914 BRMS1Q9HCU9 246 aa5.73□□□□□ -1.49
SDC2-204ENST00000519914 DCP1AQ9NPI6 582 aaPredicted RBP5.73□□□□□ -1.49
SDC2-204ENST00000519914 FAM53CQ9NYF3 392 aa5.73□□□□□ -1.49
SDC2-204ENST00000519914 RAI14Q9P0K7 980 aa5.73□□□□□ -1.49
SDC2-204ENST00000519914 FRRS1LQ9P0K9 344 aa5.73□□□□□ -1.49
SDC2-204ENST00000519914 KCNJ14Q9UNX9 436 aa5.73□□□□□ -1.49
SDC2-204ENST00000519914 LEMD3Q9Y2U8 911 aa5.73□□□□□ -1.49
SDC2-204ENST00000519914 PCDHB6Q9Y5E3 794 aa5.73□□□□□ -1.49
SDC2-204ENST00000519914 ITIH6Q6UXX5 1313 aa5.72□□□□□ -1.49
SDC2-204ENST00000519914 LRRC10BA6NIK2 292 aa5.72□□□□□ -1.49
SDC2-204ENST00000519914 BIN1O00499 593 aa5.72□□□□□ -1.49
SDC2-204ENST00000519914 OPLAHO14841 1288 aa5.72□□□□□ -1.49
SDC2-204ENST00000519914 POLR2DO15514 142 aaKnown RBP5.72□□□□□ -1.49
SDC2-204ENST00000519914 STX10O60499 249 aa5.72□□□□□ -1.49
SDC2-204ENST00000519914 DEAF1O75398 565 aaPredicted RBP5.72□□□□□ -1.49
SDC2-204ENST00000519914 SLU7O95391 586 aaKnown RBP5.72□□□□□ -1.49
SDC2-204ENST00000519914 ATP1A3P13637 1013 aa5.72□□□□□ -1.49
SDC2-204ENST00000519914 CALML3P27482 149 aa5.72□□□□□ -1.49
SDC2-204ENST00000519914 SMARCA1P28370 1054 aa5.72□□□□□ -1.49
SDC2-204ENST00000519914 HIBADHP31937 336 aaKnown RBP5.72□□□□□ -1.49
SDC2-204ENST00000519914 ETF1P62495 437 aaKnown RBP5.72□□□□□ -1.49
SDC2-204ENST00000519914 DYNLL1P63167 89 aaKnown RBP5.72□□□□□ -1.49
SDC2-204ENST00000519914 GPLD1P80108 840 aa5.72□□□□□ -1.49
SDC2-204ENST00000519914 AKAP17AQ02040 695 aaKnown RBP5.72□□□□□ -1.49
SDC2-204ENST00000519914 MECOMQ03112 1051 aa5.72□□□□□ -1.49
SDC2-204ENST00000519914 FMR1Q06787 632 aaKnown RBP eCLIP5.72□□□□□ -1.49
SDC2-204ENST00000519914 NR1I3Q14994 352 aa5.72□□□□□ -1.49
SDC2-204ENST00000519914 PFKFB3Q16875 520 aaPredicted RBP5.72□□□□□ -1.49
SDC2-204ENST00000519914 RRP12Q5JTH9 1297 aaKnown RBP5.72□□□□□ -1.49
SDC2-204ENST00000519914 CDKAL1Q5VV42 579 aa5.72□□□□□ -1.49
SDC2-204ENST00000519914 TBC1D9BQ66K14 1250 aa5.72□□□□□ -1.49
SDC2-204ENST00000519914 RCSD1Q6JBY9 416 aa5.72□□□□□ -1.49
SDC2-204ENST00000519914 GDF6Q6KF10 455 aaPredicted RBP5.72□□□□□ -1.49
SDC2-204ENST00000519914 TRIM65Q6PJ69 517 aa5.72□□□□□ -1.49
SDC2-204ENST00000519914 IGF2-ASQ6U949 168 aa5.72□□□□□ -1.49
SDC2-204ENST00000519914 REXO1L1PQ8IX06 675 aa5.72□□□□□ -1.49
SDC2-204ENST00000519914 RGL4Q8IZJ4 473 aa5.72□□□□□ -1.49
SDC2-204ENST00000519914 ZNF622Q969S3 477 aaKnown RBP eCLIP5.72□□□□□ -1.49
SDC2-204ENST00000519914 MED15Q96RN5 788 aa5.72□□□□□ -1.49
SDC2-204ENST00000519914 NAA15Q9BXJ9 866 aaKnown RBP5.72□□□□□ -1.49
SDC2-204ENST00000519914 CSRNP2Q9H175 543 aa5.72□□□□□ -1.49
SDC2-204ENST00000519914 FANCLQ9NW38 375 aa5.72□□□□□ -1.49
SDC2-204ENST00000519914 RTCBQ9Y3I0 505 aaKnown RBP5.72□□□□□ -1.49
SDC2-204ENST00000519914 GREB1LQ9C091 1923 aaPredicted RBP5.71□□□□□ -1.5
SDC2-204ENST00000519914 A0A087X0B3 334 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 FAM196BA6NMK8 535 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 MINDY4BA8MYZ0 360 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 FOXN1O15353 648 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 ZSCAN12O43309 604 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 KCNQ2O43526 872 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 XYLBO75191 536 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 PLEKHA8P1O95397 391 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 SERPINC1P01008 464 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 MYL1P05976 194 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 TOP1P11387 765 aaKnown RBP5.71□□□□□ -1.5
SDC2-204ENST00000519914 SCG2P13521 617 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 HOXA7P31268 230 aaPredicted RBP5.71□□□□□ -1.5
SDC2-204ENST00000519914 KIF5BP33176 963 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 LONP1P36776 959 aaKnown RBP5.71□□□□□ -1.5
SDC2-204ENST00000519914 GNAQP50148 359 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 IRX3P78415 501 aaPredicted RBP5.71□□□□□ -1.5
SDC2-204ENST00000519914 GSTO1P78417 241 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 ORC2Q13416 577 aaPredicted RBP5.71□□□□□ -1.5
SDC2-204ENST00000519914 GRAPQ13588 217 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 GRM4Q14833 912 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 EARS2Q5JPH6 523 aaKnown RBP5.71□□□□□ -1.5
SDC2-204ENST00000519914 TTC38Q5R3I4 469 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 C12orf60Q5U649 245 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 SPATA1Q5VX52 437 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 SPECC1LQ69YQ0 1117 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 TPTE2Q6XPS3 522 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 SRBD1Q8N5C6 995 aaKnown RBP5.71□□□□□ -1.5
SDC2-204ENST00000519914 DTWD1Q8N5C7 304 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 C4orf32Q8N8J7 132 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 TC2NQ8N9U0 490 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 ZNF397Q8NF99 534 aaPredicted RBP5.71□□□□□ -1.5
SDC2-204ENST00000519914 CTCFLQ8NI51 663 aaPredicted RBP5.71□□□□□ -1.5
SDC2-204ENST00000519914 WDR66Q8TBY9 1149 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 GRAPLQ8TC17 118 aaPredicted RBP5.71□□□□□ -1.5
SDC2-204ENST00000519914 NUP133Q8WUM0 1156 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 CCDC51Q96ER9 411 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 PAGE5Q96GU1 130 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 NSUN5Q96P11 429 aaKnown RBP5.71□□□□□ -1.5
SDC2-204ENST00000519914 PANX2Q96RD6 677 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 CTAGE1Q96RT6 745 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 LZTS2Q9BRK4 669 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 ZKSCAN3Q9BRR0 538 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 MAGEF1Q9HAY2 307 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 CABP5Q9NP86 173 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 OGFRQ9NZT2 677 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 VPS54Q9P1Q0 977 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 ABCF2Q9UG63 623 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 DDX41Q9UJV9 622 aaKnown RBP5.71□□□□□ -1.5
SDC2-204ENST00000519914 LRFN2Q9ULH4 789 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 NFE2L3Q9Y4A8 694 aa5.71□□□□□ -1.5
SDC2-204ENST00000519914 BAZ2BQ9UIF8 2168 aaKnown RBP5.7□□□□□ -1.5
SDC2-204ENST00000519914 PLIN4Q96Q06 1357 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms