RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 ZCWPW2Q504Y3 356 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 OTOP1Q7RTM1 612 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 AGBL1Q96MI9 1066 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 REEP2Q9BRK0 252 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 BHMT2Q9H2M3 363 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 HACL1Q9UJ83 578 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 PCDHA2Q9Y5H9 948 aa9.33□□□□□ -0.92
HMGB4-203ENST00000519684 EPN1Q9Y6I3 576 aaPredicted RBP9.33□□□□□ -0.92
HMGB4-203ENST00000519684 SMCHD1A6NHR9 2005 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 EML1O00423 815 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 PSMD10O75832 226 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 EGFRP00533 1210 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 GAP43P17677 238 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 MUTP22033 750 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 HSD17B4P51659 736 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 USP14P54578 494 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 KRT83P78385 493 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 ZNF569Q5MCW4 686 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 SAMD7Q7Z3H4 446 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 SFR1Q86XK3 245 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 TPH2Q8IWU9 490 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 DYDC2Q96IM9 177 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 CHP1Q99653 195 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 TTYH3Q9C0H2 523 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 DEFB129Q9H1M3 183 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 MMRN2Q9H8L6 949 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 RGL1Q9NZL6 768 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 MYO1AQ9UBC5 1043 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.32□□□□□ -0.92
HMGB4-203ENST00000519684 V9GYY5 206 aaPredicted RBP9.32□□□□□ -0.92
HMGB4-203ENST00000519684 CETN3O15182 167 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 CALUO43852 315 aaPredicted RBP9.32□□□□□ -0.92
HMGB4-203ENST00000519684 ZBED4O75132 1171 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 FLOT1O75955 427 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 ALAS1P13196 640 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 EPS15P42566 896 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 CTTNQ14247 550 aaKnown RBP9.32□□□□□ -0.92
HMGB4-203ENST00000519684 ELF2Q15723 593 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 MEA1Q16626 185 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 EDRF1Q3B7T1 1238 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 KIAA1328Q86T90 577 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 CCDC170Q8IYT3 715 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 CPXCR1Q8N123 301 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 NEK11Q8NG66 645 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 SCFD1Q8WVM8 642 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 MXRA8Q9BRK3 442 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 FGFBP2Q9BYJ0 223 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 AS3MTQ9HBK9 375 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 AGPAT5Q9NUQ2 364 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 LOXHD1Q8IVV2 1947 aa9.32□□□□□ -0.92
HMGB4-203ENST00000519684 CTAGE9A4FU28 777 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 FZD9O00144 591 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 FAM13AO94988 1023 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 MTMR2Q13614 643 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 TUBB2AQ13885 445 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 NAA30Q147X3 362 aaPredicted RBP9.31□□□□□ -0.92
HMGB4-203ENST00000519684 R3HDM1Q15032 1099 aaKnown RBP9.31□□□□□ -0.92
HMGB4-203ENST00000519684 APOBEC3FQ8IUX4 373 aaKnown RBP9.31□□□□□ -0.92
HMGB4-203ENST00000519684 SAMD3Q8N6K7 520 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 NEK9Q8TD19 979 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 UBXN4Q92575 508 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 NACC1Q96RE7 527 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 TUBB2BQ9BVA1 445 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 RUSC1Q9BVN2 902 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 KCTD10Q9H3F6 313 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 PICK1Q9NRD5 415 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 FAM207AQ9NSI2 230 aaPredicted RBP9.31□□□□□ -0.92
HMGB4-203ENST00000519684 MAP3K20Q9NYL2 800 aaKnown RBP9.31□□□□□ -0.92
HMGB4-203ENST00000519684 FAM184BQ9ULE4 1060 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 SIK3Q9Y2K2 1263 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.31□□□□□ -0.92
HMGB4-203ENST00000519684 ZNF536O15090 1300 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 RASSF10A6NK89 507 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 IPO5O00410 1097 aaKnown RBP9.31□□□□□ -0.92
HMGB4-203ENST00000519684 FDX1P10109 184 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 ARP10275 920 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 VCAM1P19320 739 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 MAP3K9P80192 1104 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 CDK17Q00537 523 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 PPP2R3AQ06190 1150 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 ADAM9Q13443 819 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 EPHA7Q15375 998 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 KNOP1Q1ED39 458 aaKnown RBP9.31□□□□□ -0.92
HMGB4-203ENST00000519684 WDR59Q6PJI9 974 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 NIPA1Q7RTP0 329 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 CACNA2D4Q7Z3S7 1137 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 RIT2Q99578 217 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 HSD17B14Q9BPX1 270 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 CARD6Q9BX69 1037 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 UNC45AQ9H3U1 944 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 HAUS4Q9H6D7 363 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 RPAP3Q9H6T3 665 aaPredicted RBP9.31□□□□□ -0.92
HMGB4-203ENST00000519684 NHEJ1Q9H9Q4 299 aaPredicted RBP9.31□□□□□ -0.92
HMGB4-203ENST00000519684 SLC38A10Q9HBR0 1119 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 RAVER2Q9HCJ3 691 aaKnown RBP9.31□□□□□ -0.92
HMGB4-203ENST00000519684 PPP1R9AQ9ULJ8 1098 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 MRFAP1Q9Y605 127 aa9.31□□□□□ -0.92
HMGB4-203ENST00000519684 ASTN2O75129 1339 aaPredicted RBP9.3□□□□□ -0.92
HMGB4-203ENST00000519684 RPTORQ8N122 1335 aa9.3□□□□□ -0.92
HMGB4-203ENST00000519684 EFCAB8A8MWE9 144 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms