RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	RGL1	Q9NZL6	768 aa		13.71	□□□□□ -0.22
SPIDR-210	ENST00000519362	MYO1A	Q9UBC5	1043 aa		13.71	□□□□□ -0.22
SPIDR-210	ENST00000519362	TRAF5	O00463	557 aa		13.7	□□□□□ -0.22
SPIDR-210	ENST00000519362	CTNND1	O60716	968 aa	Known RBP	13.7	□□□□□ -0.22
SPIDR-210	ENST00000519362	TADA3	O75528	432 aa		13.7	□□□□□ -0.22
SPIDR-210	ENST00000519362	SLITRK3	O94933	977 aa		13.7	□□□□□ -0.22
SPIDR-210	ENST00000519362	GNA14	O95837	355 aa		13.7	□□□□□ -0.22
SPIDR-210	ENST00000519362	EDRF1	Q3B7T1	1238 aa		13.7	□□□□□ -0.22
SPIDR-210	ENST00000519362	B3GNT9	Q6UX72	402 aa		13.7	□□□□□ -0.22
SPIDR-210	ENST00000519362	PPP4R3CP	Q6ZMV5	832 aa		13.7	□□□□□ -0.22
SPIDR-210	ENST00000519362	ZNF662	Q6ZS27	426 aa		13.7	□□□□□ -0.22
SPIDR-210	ENST00000519362	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.7	□□□□□ -0.22
SPIDR-210	ENST00000519362	AGBL1	Q96MI9	1066 aa		13.7	□□□□□ -0.22
SPIDR-210	ENST00000519362	CARD6	Q9BX69	1037 aa		13.7	□□□□□ -0.22
SPIDR-210	ENST00000519362	BHMT2	Q9H2M3	363 aa		13.7	□□□□□ -0.22
SPIDR-210	ENST00000519362	RPTOR	Q8N122	1335 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	EFCAB8	A8MWE9	144 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	FZD9	O00144	591 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	EPHB6	O15197	1021 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	MUT	P22033	750 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	CASP5	P51878	434 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	UBXN2A	P68543	259 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	SET	Q01105	290 aa	Predicted RBP	13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	SLC30A10	Q6XR72	485 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	NELFCD	Q8IXH7	590 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	MICALL2	Q8IY33	904 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	CCDC170	Q8IYT3	715 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	ZNF397	Q8NF99	534 aa	Predicted RBP	13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	CLEC4D	Q8WXI8	215 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	RUSC1	Q9BVN2	902 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	CCDC94	Q9BW85	323 aa	Predicted RBP	13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	CCPG1	Q9ULG6	757 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	PLAGL2	Q9UPG8	496 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	TRAF3IP3	Q9Y228	551 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	RABGAP1	Q9Y3P9	1069 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	HOXD13	P35453	343 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	GMPS	P49915	693 aa	Predicted RBP	13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	PRELP	P51888	382 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	HERVK_113	P62684	666 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	KCNMA1	Q12791	1236 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	BMT2	Q1RMZ1	405 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	ZNF569	Q5MCW4	686 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	RINT1	Q6NUQ1	792 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	SAMD7	Q7Z3H4	446 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	SFR1	Q86XK3	245 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	TRIM59	Q8IWR1	403 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	MNS1	Q8NEH6	495 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	WDR11	Q9BZH6	1224 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	EDEM3	Q9BZQ6	932 aa		13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.69	□□□□□ -0.22
SPIDR-210	ENST00000519362	ASTN2	O75129	1339 aa	Predicted RBP	13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	EIF3CL	B5ME19	914 aa	Known RBP	13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	GAS7	O60861	476 aa		13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	AR	P10275	920 aa		13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	CYLC1	P35663	651 aa	Predicted RBP	13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	KRT83	P78385	493 aa		13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	CTTN	Q14247	550 aa	Known RBP	13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	CCDC40	Q4G0X9	1142 aa		13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	ARHGAP27	Q6ZUM4	889 aa		13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	SLC35F6	Q8N357	371 aa		13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	HOOK2	Q96ED9	719 aa		13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	DYDC2	Q96IM9	177 aa		13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	EIF3C	Q99613	913 aa	Known RBP	13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	SGIP1	Q9BQI5	828 aa		13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	MXRA8	Q9BRK3	442 aa		13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	ZNF577	Q9BSK1	485 aa		13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	ZHX3	Q9H4I2	956 aa		13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	HAUS4	Q9H6D7	363 aa		13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	SLC38A10	Q9HBR0	1119 aa		13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	FAM207A	Q9NSI2	230 aa	Predicted RBP	13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	COL20A1	Q9P218	1284 aa		13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	CNOT7	Q9UIV1	285 aa	Known RBP	13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	HACL1	Q9UJ83	578 aa		13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	CD2AP	Q9Y5K6	639 aa		13.68	□□□□□ -0.22
SPIDR-210	ENST00000519362	RSPH10B2	B2RC85	870 aa		13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	NFIB	O00712	420 aa		13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	RSPH10B	P0C881	870 aa		13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	BCR	P11274	1271 aa		13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	H2AFX	P16104	143 aa	Predicted RBP	13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	ITGB5	P18084	799 aa		13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	PPP2R3A	Q06190	1150 aa		13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	ADAM9	Q13443	819 aa		13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	KNOP1	Q1ED39	458 aa	Known RBP	13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	FBXO38	Q6PIJ6	1188 aa		13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	C1orf186	Q6ZWK4	172 aa		13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	KRT26	Q7Z3Y9	468 aa		13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	BAP1	Q92560	729 aa		13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	RIT2	Q99578	217 aa		13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	MMRN2	Q9H8L6	949 aa		13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	OLFML3	Q9NRN5	406 aa		13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	BCS1L	Q9Y276	419 aa		13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	IPO5	O00410	1097 aa	Known RBP	13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	PDXK	O00764	312 aa		13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	CHMP2A	O43633	222 aa		13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	ERCC3	P19447	782 aa		13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	RASSF7	Q02833	373 aa		13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	DGKZ	Q13574	1117 aa		13.67	□□□□□ -0.22
SPIDR-210	ENST00000519362	TUBB2A	Q13885	445 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms