RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 KBTBD4Q9NVX7 518 aa7.81□□□□□ -1.16
CCDC6-203ENST00000518638 CSADQ9Y600 493 aa7.81□□□□□ -1.16
CCDC6-203ENST00000518638 MYH3P11055 1940 aa7.81□□□□□ -1.16
CCDC6-203ENST00000518638 CCL15-CCL14A0A0B4J2E2 113 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 DCDC2CA8MYV0 355 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 PF4P02776 101 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 PCCAP05165 728 aaPredicted RBP7.8□□□□□ -1.16
CCDC6-203ENST00000518638 CFPP27918 469 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 PPP2R1AP30153 589 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 GRK4P32298 578 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 BMP8BP34820 402 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 ZNF76P36508 570 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 CCT4P50991 539 aaKnown RBP7.8□□□□□ -1.16
CCDC6-203ENST00000518638 FANCCQ00597 558 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 CAMK2GQ13555 558 aaPredicted RBP7.8□□□□□ -1.16
CCDC6-203ENST00000518638 CNGB1Q14028 1251 aaPredicted RBP7.8□□□□□ -1.16
CCDC6-203ENST00000518638 INPP5AQ14642 412 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 CCL15Q16663 113 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 CYP27C1Q4G0S4 372 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 LRFN4Q6PJG9 635 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 DEFB123Q8N688 67 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 PI4K2BQ8TCG2 481 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 NETO1Q8TDF5 533 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 ELMO3Q96BJ8 720 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 PLEKHF1Q96S99 279 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 CHMP4AQ9BY43 222 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 COPRSQ9NQ92 184 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 CHPF2Q9P2E5 772 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 GGT7Q9UJ14 662 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 SNCAIPQ9Y6H5 919 aa7.8□□□□□ -1.16
CCDC6-203ENST00000518638 WTIPA6NIX2 430 aaPredicted RBP7.79□□□□□ -1.16
CCDC6-203ENST00000518638 SCAMP3O14828 347 aaKnown RBP7.79□□□□□ -1.16
CCDC6-203ENST00000518638 USP2O75604 605 aaPredicted RBP7.79□□□□□ -1.16
CCDC6-203ENST00000518638 CETPP11597 493 aa7.79□□□□□ -1.16
CCDC6-203ENST00000518638 FKBP1AP62942 108 aaKnown RBP7.79□□□□□ -1.16
CCDC6-203ENST00000518638 LRIT3Q3SXY7 679 aa7.79□□□□□ -1.16
CCDC6-203ENST00000518638 PPM1JQ5JR12 505 aa7.79□□□□□ -1.16
CCDC6-203ENST00000518638 WIPI1Q5MNZ9 446 aaPredicted RBP7.79□□□□□ -1.16
CCDC6-203ENST00000518638 LCNL1Q6ZST4 164 aa7.79□□□□□ -1.16
CCDC6-203ENST00000518638 CYFIP1Q7L576 1253 aa7.79□□□□□ -1.16
CCDC6-203ENST00000518638 HDXQ7Z353 690 aa7.79□□□□□ -1.16
CCDC6-203ENST00000518638 C12orf40Q86WS4 652 aa7.79□□□□□ -1.16
CCDC6-203ENST00000518638 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.79□□□□□ -1.16
CCDC6-203ENST00000518638 SMYD4Q8IYR2 804 aaPredicted RBP7.79□□□□□ -1.16
CCDC6-203ENST00000518638 BRI3BPQ8WY22 251 aa7.79□□□□□ -1.16
CCDC6-203ENST00000518638 HOOK2Q96ED9 719 aa7.79□□□□□ -1.16
CCDC6-203ENST00000518638 PLPPR2Q96GM1 343 aa7.79□□□□□ -1.16
CCDC6-203ENST00000518638 ANKRD2Q9GZV1 360 aa7.79□□□□□ -1.16
CCDC6-203ENST00000518638 C1GALT1Q9NS00 363 aa7.79□□□□□ -1.16
CCDC6-203ENST00000518638 FAM53CQ9NYF3 392 aa7.79□□□□□ -1.16
CCDC6-203ENST00000518638 SRRDQ9UH36 339 aa7.79□□□□□ -1.16
CCDC6-203ENST00000518638 RIPOR2Q9Y4F9 1068 aa7.79□□□□□ -1.16
CCDC6-203ENST00000518638 SPEF2Q9C093 1822 aa7.79□□□□□ -1.16
CCDC6-203ENST00000518638 FAM205AQ6ZU69 1335 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 CUL9Q8IWT3 2517 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 FANCGO15287 622 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 TSPAN15O95858 294 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 CCL5P13501 91 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 GARTP22102 1010 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 NTF4P34130 210 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 IGHMBP2P38935 993 aaKnown RBP7.78□□□□□ -1.16
CCDC6-203ENST00000518638 TNNI2P48788 182 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 CDK8P49336 464 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 CTSWP56202 376 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 CAP1Q01518 475 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 SNAPC2Q13487 334 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 NBPF12Q5TAG4 269 aaPredicted RBP7.78□□□□□ -1.16
CCDC6-203ENST00000518638 SEZ6L2Q6UXD5 910 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 C1QL4Q86Z23 238 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 SIAH1Q8IUQ4 282 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 LRRC56Q8IYG6 542 aaPredicted RBP7.78□□□□□ -1.16
CCDC6-203ENST00000518638 PLD6Q8N2A8 252 aaKnown RBP7.78□□□□□ -1.16
CCDC6-203ENST00000518638 U2AF1L4Q8WU68 220 aaKnown RBP7.78□□□□□ -1.16
CCDC6-203ENST00000518638 ISL2Q96A47 359 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 PPP1R16BQ96T49 567 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 KRTAP9-3Q9BYQ3 159 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 VEZTQ9HBM0 779 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 CWC25Q9NXE8 425 aaPredicted RBP7.78□□□□□ -1.16
CCDC6-203ENST00000518638 MINPP1Q9UNW1 487 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 FZD1Q9UP38 647 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 DAGLAQ9Y4D2 1042 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 ARAP2Q8WZ64 1704 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 MYPNQ86TC9 1320 aa7.78□□□□□ -1.16
CCDC6-203ENST00000518638 FAM221AA4D161 298 aa7.77□□□□□ -1.17
CCDC6-203ENST00000518638 MINDY4BA8MYZ0 360 aa7.77□□□□□ -1.17
CCDC6-203ENST00000518638 GFRA2O00451 464 aa7.77□□□□□ -1.17
CCDC6-203ENST00000518638 RNGTTO60942 597 aaKnown RBP7.77□□□□□ -1.17
CCDC6-203ENST00000518638 DDX58O95786 925 aaKnown RBP7.77□□□□□ -1.17
CCDC6-203ENST00000518638 KCNJ4P48050 445 aa7.77□□□□□ -1.17
CCDC6-203ENST00000518638 RPL6Q02878 288 aaKnown RBP7.77□□□□□ -1.17
CCDC6-203ENST00000518638 VGLL4Q14135 290 aa7.77□□□□□ -1.17
CCDC6-203ENST00000518638 RASA3Q14644 834 aa7.77□□□□□ -1.17
CCDC6-203ENST00000518638 CFAP100Q494V2 611 aa7.77□□□□□ -1.17
CCDC6-203ENST00000518638 ZBTB37Q5TC79 503 aa7.77□□□□□ -1.17
CCDC6-203ENST00000518638 DIEXFQ68CQ4 756 aaKnown RBP7.77□□□□□ -1.17
CCDC6-203ENST00000518638 BNC2Q6ZN30 1099 aaPredicted RBP7.77□□□□□ -1.17
CCDC6-203ENST00000518638 ERO1BQ86YB8 467 aa7.77□□□□□ -1.17
CCDC6-203ENST00000518638 FAM43AQ8N2R8 423 aa7.77□□□□□ -1.17
CCDC6-203ENST00000518638 GATAD2BQ8WXI9 593 aa7.77□□□□□ -1.17
CCDC6-203ENST00000518638 JARID2Q92833 1246 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms