RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 ZNF790Q6PG37 636 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 FBXO33Q7Z6M2 555 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 PIGWQ7Z7B1 504 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 RASGRP4Q8TDF6 673 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 ACSBG1Q96GR2 724 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 MIPEPQ99797 713 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 GTPBP4Q9BZE4 634 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 TERF2IPQ9NYB0 399 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 PPP1R1BQ9UD71 204 aaPredicted RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZNF777Q9ULD5 760 aaPredicted RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 MYO6Q9UM54 1294 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 KIAA1024Q9UPX6 916 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 ATF5Q9Y2D1 282 aaPredicted RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 ADGRG1Q9Y653 693 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 CENPEQ02224 2701 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 MYO9AB2RTY4 2548 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 PABPN1LA6NDY0 278 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 GNAI2P04899 355 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 EDNRBP24530 442 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 ETV4P43268 484 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 CRKLP46109 303 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 MLLT10P55197 1068 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 GIT2Q14161 759 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 PTPN21Q16825 1174 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 CMPK2Q5EBM0 449 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 CREB3L3Q68CJ9 461 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 VSTM4Q8IW00 320 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 PLPP6Q8IY26 295 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 HAPLN3Q96S86 360 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 C20orf27Q9GZN8 174 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 GANQ9H2C0 597 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 IKZF4Q9H2S9 585 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 DMAC2Q9NW81 257 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 FBXO10Q9UK96 956 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 PLA2G4CQ9UP65 541 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 CCDC9Q9Y3X0 531 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 LRRFIP2Q9Y608 721 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 CLIC4Q9Y696 253 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 SPTBN1Q01082 2364 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 SHTN1A0MZ66 631 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 ADRA2AP08913 450 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 SBK3P0C264 359 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 CDC25AP30304 524 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 GCKP35557 465 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 HNRNPH2P55795 449 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 LONRF3Q496Y0 759 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 LRRC24Q50LG9 513 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 MORN1Q5T089 497 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 C1QTNF12Q5T7M4 302 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 PEAR1Q5VY43 1037 aaPredicted RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 SP5Q6BEB4 398 aaPredicted RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 TRNP1Q6NT89 227 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 SH3BP5LQ7L8J4 393 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 CTU1Q7Z7A3 348 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 TAX1BP1Q86VP1 789 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 CD302Q8IX05 232 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 RASGEF1CQ8N431 466 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 MIGA1Q8NAN2 632 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 LSM14AQ8ND56 463 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 NEK9Q8TD19 979 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 PNMA5Q96PV4 448 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 GPR20Q99678 358 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 ADAMTS10Q9H324 1103 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 DIAPH3Q9NSV4 1193 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 DLL3Q9NYJ7 618 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 CHPF2Q9P2E5 772 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 TRIM10Q9UDY6 481 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 ASAP1Q9ULH1 1129 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 PCDHGC5Q9Y5F6 944 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 SPTAN1Q13813 2472 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 GOLGA6L7A0A1B0GV03 622 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 EME2A4GXA9 379 aaPredicted RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZSCAN5CA6NGD5 496 aaPredicted RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 BMP1P13497 986 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 NF2P35240 595 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 MFAP1P55081 439 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 VSNL1P62760 191 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 ADCY2Q08462 1091 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 PPP1R15BQ5SWA1 713 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 KCNG4Q8TDN1 519 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 TBC1D5Q92609 795 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 RNF25Q96BH1 459 aaPredicted RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 TRAIPQ9BWF2 469 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 UPF3BQ9BZI7 483 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 NUCKS1Q9H1E3 243 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 DPH5Q9H2P9 285 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 BICC1Q9H694 974 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 FAM114A2Q9NRY5 505 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 ADARB2Q9NS39 739 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 PIM2Q9P1W9 311 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 CALCOCO1Q9P1Z2 691 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 LINGO3P0C6S8 592 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 PTPREP23469 700 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 MRPL12P52815 198 aaKnown RBP1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 FAM171BQ6P995 826 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 SRLQ86TD4 932 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 CFAP57Q96MR6 1250 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 HAPLN2Q9GZV7 340 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 TSPYL1Q9H0U9 437 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 642.8 ms