RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 PARVGQ9HBI0 331 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 SLAIN2Q9P270 581 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 TLK1Q9UKI8 766 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 YEATS2Q9ULM3 1422 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 TOM1L1O75674 476 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 IL6STP40189 918 aaPredicted RBP11.44□□□□□ -0.58
NEK1-206ENST00000510533 ARL4AP40617 200 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 KPNA2P52292 529 aaKnown RBP11.44□□□□□ -0.58
NEK1-206ENST00000510533 TBC1D10BQ4KMP7 808 aaPredicted RBP11.44□□□□□ -0.58
NEK1-206ENST00000510533 KCTD6Q8NC69 237 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 CEP170P1Q96L14 293 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 MRPL46Q9H2W6 279 aaKnown RBP11.44□□□□□ -0.58
NEK1-206ENST00000510533 KANSL2Q9H9L4 492 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 SLC38A10Q9HBR0 1119 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 NFU1Q9UMS0 254 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 ANGPTL3Q9Y5C1 460 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 INPP1P49441 399 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 MIS18BP1Q6P0N0 1132 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 PPP4R3CPQ6ZMV5 832 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 ANGPTL2Q9UKU9 493 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 IGSF1Q8N6C5 1336 aa11.44□□□□□ -0.58
NEK1-206ENST00000510533 CCDC188H7C350 402 aa11.43□□□□□ -0.58
NEK1-206ENST00000510533 GNGT2O14610 69 aa11.43□□□□□ -0.58
NEK1-206ENST00000510533 CRKLP46109 303 aaKnown RBP11.43□□□□□ -0.58
NEK1-206ENST00000510533 RSBN1LQ6PCB5 846 aaPredicted RBP11.43□□□□□ -0.58
NEK1-206ENST00000510533 RPS6KC1Q96S38 1066 aa11.43□□□□□ -0.58
NEK1-206ENST00000510533 APOL6Q9BWW8 343 aa11.43□□□□□ -0.58
NEK1-206ENST00000510533 CALN1Q9BXU9 219 aa11.43□□□□□ -0.58
NEK1-206ENST00000510533 LOC102724428A0A0B4J2F2 783 aa11.43□□□□□ -0.58
NEK1-206ENST00000510533 INO80B-WBP1J3KQ70 363 aa11.43□□□□□ -0.58
NEK1-206ENST00000510533 SIK1P57059 783 aa11.43□□□□□ -0.58
NEK1-206ENST00000510533 CDC37Q16543 378 aaPredicted RBP11.43□□□□□ -0.58
NEK1-206ENST00000510533 GLE1Q53GS7 698 aaKnown RBP11.43□□□□□ -0.58
NEK1-206ENST00000510533 RESP18Q5W5W9 173 aa11.43□□□□□ -0.58
NEK1-206ENST00000510533 ALKBH5Q6P6C2 394 aaKnown RBP11.43□□□□□ -0.58
NEK1-206ENST00000510533 PI16Q6UXB8 463 aa11.43□□□□□ -0.58
NEK1-206ENST00000510533 ATP6V1E2Q96A05 226 aa11.43□□□□□ -0.58
NEK1-206ENST00000510533 AIFM3Q96NN9 605 aa11.43□□□□□ -0.58
NEK1-206ENST00000510533 INO80BQ9C086 356 aaPredicted RBP11.43□□□□□ -0.58
NEK1-206ENST00000510533 NUB1Q9Y5A7 615 aa11.43□□□□□ -0.58
NEK1-206ENST00000510533 CLASP1Q7Z460 1538 aa11.43□□□□□ -0.58
NEK1-206ENST00000510533 TTI1O43156 1089 aa11.43□□□□□ -0.58
NEK1-206ENST00000510533 PTPN12Q05209 780 aaKnown RBP11.43□□□□□ -0.58
NEK1-206ENST00000510533 SIRT2Q8IXJ6 389 aa11.43□□□□□ -0.58
NEK1-206ENST00000510533 ESRRAP11474 423 aaPredicted RBP11.43□□□□□ -0.58
NEK1-206ENST00000510533 CA4P22748 312 aa11.43□□□□□ -0.58
NEK1-206ENST00000510533 PCGF5Q86SE9 256 aa11.43□□□□□ -0.58
NEK1-206ENST00000510533 FLAD1Q8NFF5 587 aa11.43□□□□□ -0.58
NEK1-206ENST00000510533 USP21Q9UK80 565 aa11.43□□□□□ -0.58
NEK1-206ENST00000510533 ORC6Q9Y5N6 252 aa11.43□□□□□ -0.58
NEK1-206ENST00000510533 APBA3O96018 575 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 APOEP02649 317 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 PLS3P13797 630 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 RWDD2BP57060 319 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 TFAMQ00059 246 aaKnown RBP11.42□□□□□ -0.58
NEK1-206ENST00000510533 BBS9Q3SYG4 887 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 PI4K2BQ8TCG2 481 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 SEC31BQ9NQW1 1179 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 ADAMTS1Q9UHI8 967 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 SERPINB13Q9UIV8 391 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 WDR91A4D1P6 747 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 BMP3P12645 472 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 HNRNPH2P55795 449 aaKnown RBP11.42□□□□□ -0.58
NEK1-206ENST00000510533 IQCB1Q15051 598 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 USP17L2Q6R6M4 530 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 CENPUQ71F23 418 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 RHOT2Q8IXI1 618 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 SNX25Q9H3E2 840 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 PLAAQ9Y263 795 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 SYNMO15061 1565 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 IQANK1A0A1B0GTG1 560 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 MAPK13O15264 365 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 TRPA1O75762 1119 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 THOC5Q13769 683 aaKnown RBP11.42□□□□□ -0.58
NEK1-206ENST00000510533 ARID5BQ14865 1188 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 PDCD2Q16342 344 aaPredicted RBP11.42□□□□□ -0.58
NEK1-206ENST00000510533 ZNF449Q6P9G9 518 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 RSRC2Q7L4I2 434 aaKnown RBP11.42□□□□□ -0.58
NEK1-206ENST00000510533 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.42□□□□□ -0.58
NEK1-206ENST00000510533 MID2Q9UJV3 735 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 PACSIN2Q9UNF0 486 aaPredicted RBP11.42□□□□□ -0.58
NEK1-206ENST00000510533 DIS3Q9Y2L1 958 aaKnown RBP11.42□□□□□ -0.58
NEK1-206ENST00000510533 FGGP02679 453 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 TERF2Q15554 542 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 TMTC4Q5T4D3 741 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 NUGGCQ68CJ6 796 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 TOGARAM2Q6ZUX3 1019 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 MYLK4Q86YV6 388 aaPredicted RBP11.42□□□□□ -0.58
NEK1-206ENST00000510533 CNKSR1Q969H4 720 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 CFAP36Q96G28 342 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 AKT3Q9Y243 479 aa11.42□□□□□ -0.58
NEK1-206ENST00000510533 IPO5O00410 1097 aaKnown RBP11.41□□□□□ -0.58
NEK1-206ENST00000510533 PRPSAP2O60256 369 aa11.41□□□□□ -0.58
NEK1-206ENST00000510533 ALCAMQ13740 583 aa11.41□□□□□ -0.58
NEK1-206ENST00000510533 KCTD2Q14681 263 aa11.41□□□□□ -0.58
NEK1-206ENST00000510533 ATG16L1Q676U5 607 aa11.41□□□□□ -0.58
NEK1-206ENST00000510533 PDIK1LQ8N165 341 aa11.41□□□□□ -0.58
NEK1-206ENST00000510533 CCDC138Q96M89 665 aa11.41□□□□□ -0.58
NEK1-206ENST00000510533 ZBTB1Q9Y2K1 713 aa11.41□□□□□ -0.58
NEK1-206ENST00000510533 PPME1Q9Y570 386 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms