RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 C22orf23Q9BZE7 217 aa5.39□□□□□ -1.55
NIPBL-206ENST00000509429 KLHL3Q9UH77 587 aa5.39□□□□□ -1.55
NIPBL-206ENST00000509429 ACAD8Q9UKU7 415 aa5.39□□□□□ -1.55
NIPBL-206ENST00000509429 IFRD1O00458 451 aaPredicted RBP5.38□□□□□ -1.55
NIPBL-206ENST00000509429 MEIS1O00470 390 aa5.38□□□□□ -1.55
NIPBL-206ENST00000509429 IPO7O95373 1038 aaKnown RBP5.38□□□□□ -1.55
NIPBL-206ENST00000509429 LDHAP00338 332 aaKnown RBP5.38□□□□□ -1.55
NIPBL-206ENST00000509429 CTSKP43235 329 aa5.38□□□□□ -1.55
NIPBL-206ENST00000509429 COL10A1Q03692 680 aa5.38□□□□□ -1.55
NIPBL-206ENST00000509429 WASHC5Q12768 1159 aa5.38□□□□□ -1.55
NIPBL-206ENST00000509429 ENOX2Q16206 610 aaKnown RBP5.38□□□□□ -1.55
NIPBL-206ENST00000509429 ALDH1L2Q3SY69 923 aa5.38□□□□□ -1.55
NIPBL-206ENST00000509429 MAP9Q49MG5 647 aa5.38□□□□□ -1.55
NIPBL-206ENST00000509429 RTP2Q5QGT7 225 aa5.38□□□□□ -1.55
NIPBL-206ENST00000509429 C16orf87Q6PH81 154 aa5.38□□□□□ -1.55
NIPBL-206ENST00000509429 OTUD6AQ7L8S5 288 aa5.38□□□□□ -1.55
NIPBL-206ENST00000509429 FILIP1Q7Z7B0 1213 aa5.38□□□□□ -1.55
NIPBL-206ENST00000509429 KBTBD2Q8IY47 623 aa5.38□□□□□ -1.55
NIPBL-206ENST00000509429 MIGA1Q8NAN2 632 aa5.38□□□□□ -1.55
NIPBL-206ENST00000509429 NGDNQ8NEJ9 315 aaKnown RBP5.38□□□□□ -1.55
NIPBL-206ENST00000509429 PPM1EQ8WY54 764 aa5.38□□□□□ -1.55
NIPBL-206ENST00000509429 SLC39A13Q96H72 371 aa5.38□□□□□ -1.55
NIPBL-206ENST00000509429 PEX11GQ96HA9 241 aa5.38□□□□□ -1.55
NIPBL-206ENST00000509429 AGAP3Q96P47 875 aa5.38□□□□□ -1.55
NIPBL-206ENST00000509429 POLR3CQ9BUI4 534 aaPredicted RBP5.38□□□□□ -1.55
NIPBL-206ENST00000509429 ALDH8A1Q9H2A2 487 aaPredicted RBP5.38□□□□□ -1.55
NIPBL-206ENST00000509429 LZTS1Q9Y250 596 aa5.38□□□□□ -1.55
NIPBL-206ENST00000509429 SLC45A1Q9Y2W3 748 aa5.38□□□□□ -1.55
NIPBL-206ENST00000509429 WASHC2AQ641Q2 1341 aa5.38□□□□□ -1.55
NIPBL-206ENST00000509429 KAT6BQ8WYB5 2073 aa5.38□□□□□ -1.55
NIPBL-206ENST00000509429 GOLGA6L6A8MZA4 724 aa5.37□□□□□ -1.55
NIPBL-206ENST00000509429 ZBTB7AO95365 584 aa5.37□□□□□ -1.55
NIPBL-206ENST00000509429 CCDC172P0C7W6 258 aa5.37□□□□□ -1.55
NIPBL-206ENST00000509429 PAX7P23759 505 aa5.37□□□□□ -1.55
NIPBL-206ENST00000509429 KRTAP5-9P26371 169 aa5.37□□□□□ -1.55
NIPBL-206ENST00000509429 HSD3B2P26439 372 aa5.37□□□□□ -1.55
NIPBL-206ENST00000509429 NAP1L1P55209 391 aaKnown RBP5.37□□□□□ -1.55
NIPBL-206ENST00000509429 E2F5Q15329 346 aa5.37□□□□□ -1.55
NIPBL-206ENST00000509429 LONRF1Q17RB8 773 aa5.37□□□□□ -1.55
NIPBL-206ENST00000509429 LCA5Q86VQ0 697 aa5.37□□□□□ -1.55
NIPBL-206ENST00000509429 NDUFAF2Q8N183 169 aa5.37□□□□□ -1.55
NIPBL-206ENST00000509429 SAMD3Q8N6K7 520 aa5.37□□□□□ -1.55
NIPBL-206ENST00000509429 KIAA1958Q8N8K9 716 aa5.37□□□□□ -1.55
NIPBL-206ENST00000509429 FRS2Q8WU20 508 aa5.37□□□□□ -1.55
NIPBL-206ENST00000509429 EDAQ92838 391 aa5.37□□□□□ -1.55
NIPBL-206ENST00000509429 ARMC5Q96C12 935 aa5.37□□□□□ -1.55
NIPBL-206ENST00000509429 TTC14Q96N46 770 aa5.37□□□□□ -1.55
NIPBL-206ENST00000509429 PRRX2Q99811 253 aa5.37□□□□□ -1.55
NIPBL-206ENST00000509429 SYT3Q9BQG1 590 aa5.37□□□□□ -1.55
NIPBL-206ENST00000509429 TINF2Q9BSI4 451 aa5.37□□□□□ -1.55
NIPBL-206ENST00000509429 GTPBP4Q9BZE4 634 aaKnown RBP5.37□□□□□ -1.55
NIPBL-206ENST00000509429 NUDT5Q9UKK9 219 aa5.37□□□□□ -1.55
NIPBL-206ENST00000509429 ASAP1Q9ULH1 1129 aa5.37□□□□□ -1.55
NIPBL-206ENST00000509429 KLHL33A6NCF5 533 aa5.36□□□□□ -1.55
NIPBL-206ENST00000509429 GOLGA6L22H0YM25 854 aa5.36□□□□□ -1.55
NIPBL-206ENST00000509429 RGS13O14921 159 aa5.36□□□□□ -1.55
NIPBL-206ENST00000509429 B4GALT4O60513 344 aa5.36□□□□□ -1.55
NIPBL-206ENST00000509429 VAMP4O75379 141 aa5.36□□□□□ -1.55
NIPBL-206ENST00000509429 LETM1O95202 739 aaPredicted RBP5.36□□□□□ -1.55
NIPBL-206ENST00000509429 FOSP01100 380 aaPredicted RBP5.36□□□□□ -1.55
NIPBL-206ENST00000509429 ZNF853P0CG23 659 aa5.36□□□□□ -1.55
NIPBL-206ENST00000509429 ABCD1P33897 745 aa5.36□□□□□ -1.55
NIPBL-206ENST00000509429 TRPC1P48995 793 aa5.36□□□□□ -1.55
NIPBL-206ENST00000509429 ZNF132P52740 706 aa5.36□□□□□ -1.55
NIPBL-206ENST00000509429 NFE2L2Q16236 605 aa5.36□□□□□ -1.55
NIPBL-206ENST00000509429 LCE1EQ5T753 118 aa5.36□□□□□ -1.55
NIPBL-206ENST00000509429 B4GALNT3Q6L9W6 998 aa5.36□□□□□ -1.55
NIPBL-206ENST00000509429 CABP7Q86V35 215 aa5.36□□□□□ -1.55
NIPBL-206ENST00000509429 TTC30AQ86WT1 665 aa5.36□□□□□ -1.55
NIPBL-206ENST00000509429 IQCF2Q8IXL9 164 aa5.36□□□□□ -1.55
NIPBL-206ENST00000509429 CHCHD4Q8N4Q1 142 aa5.36□□□□□ -1.55
NIPBL-206ENST00000509429 NTN5Q8WTR8 489 aaPredicted RBP5.36□□□□□ -1.55
NIPBL-206ENST00000509429 MMRN2Q9H8L6 949 aa5.36□□□□□ -1.55
NIPBL-206ENST00000509429 IFT57Q9NWB7 429 aa5.36□□□□□ -1.55
NIPBL-206ENST00000509429 REV1Q9UBZ9 1251 aa5.36□□□□□ -1.55
NIPBL-206ENST00000509429 TTF2Q9UNY4 1162 aaKnown RBP5.36□□□□□ -1.55
NIPBL-206ENST00000509429 TOP2AP11388 1531 aaKnown RBP5.36□□□□□ -1.55
NIPBL-206ENST00000509429 WRNQ14191 1432 aaPredicted RBP eCLIP5.35□□□□□ -1.55
NIPBL-206ENST00000509429 PABPN1LA6NDY0 278 aaKnown RBP5.35□□□□□ -1.55
NIPBL-206ENST00000509429 TRIM64CA6NLI5 447 aa5.35□□□□□ -1.55
NIPBL-206ENST00000509429 KIF5CO60282 957 aa5.35□□□□□ -1.55
NIPBL-206ENST00000509429 RNASEH2AO75792 299 aaKnown RBP5.35□□□□□ -1.55
NIPBL-206ENST00000509429 TPPPO94811 219 aa5.35□□□□□ -1.55
NIPBL-206ENST00000509429 NBPF7P0C2Y1 421 aaPredicted RBP5.35□□□□□ -1.55
NIPBL-206ENST00000509429 NAT2P11245 290 aa5.35□□□□□ -1.55
NIPBL-206ENST00000509429 MAKP20794 623 aa5.35□□□□□ -1.55
NIPBL-206ENST00000509429 RRM1P23921 792 aa5.35□□□□□ -1.55
NIPBL-206ENST00000509429 CCT2P78371 535 aaKnown RBP5.35□□□□□ -1.55
NIPBL-206ENST00000509429 POU4F1Q01851 419 aa5.35□□□□□ -1.55
NIPBL-206ENST00000509429 IQCEQ6IPM2 695 aa5.35□□□□□ -1.55
NIPBL-206ENST00000509429 CYP2R1Q6VVX0 501 aa5.35□□□□□ -1.55
NIPBL-206ENST00000509429 EP400NLQ6ZTU2 488 aa5.35□□□□□ -1.55
NIPBL-206ENST00000509429 ZNF627Q7L945 461 aa5.35□□□□□ -1.55
NIPBL-206ENST00000509429 ARHGEF25Q86VW2 580 aa5.35□□□□□ -1.55
NIPBL-206ENST00000509429 SKAP1Q86WV1 359 aa5.35□□□□□ -1.55
NIPBL-206ENST00000509429 PAF1Q8N7H5 531 aa5.35□□□□□ -1.55
NIPBL-206ENST00000509429 MPHOSPH6Q99547 160 aaKnown RBP5.35□□□□□ -1.55
NIPBL-206ENST00000509429 TMEM168Q9H0V1 697 aa5.35□□□□□ -1.55
NIPBL-206ENST00000509429 ZSWIM4Q9H7M6 989 aa5.35□□□□□ -1.55
NIPBL-206ENST00000509429 ADARB2Q9NS39 739 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms