RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 IGLV3-22A0A075B6J6 115 aa12.81□□□□□ -0.36
PRPF40B-203ENST00000508736 RNF225M0QZC1 329 aaPredicted RBP12.81□□□□□ -0.36
PRPF40B-203ENST00000508736 ZRANB2O95218 330 aaKnown RBP eCLIP12.81□□□□□ -0.36
PRPF40B-203ENST00000508736 PNMA6AP0CW24 399 aaPredicted RBP12.81□□□□□ -0.36
PRPF40B-203ENST00000508736 FCER1AP12319 257 aa12.81□□□□□ -0.36
PRPF40B-203ENST00000508736 HOXA13P31271 388 aaPredicted RBP12.81□□□□□ -0.36
PRPF40B-203ENST00000508736 ARHGAP25P42331 645 aa12.81□□□□□ -0.36
PRPF40B-203ENST00000508736 FAM193AP78312 1265 aa12.81□□□□□ -0.36
PRPF40B-203ENST00000508736 ZYXQ15942 572 aaKnown RBP12.81□□□□□ -0.36
PRPF40B-203ENST00000508736 MEA1Q16626 185 aa12.81□□□□□ -0.36
PRPF40B-203ENST00000508736 CENPPQ6IPU0 288 aa12.81□□□□□ -0.36
PRPF40B-203ENST00000508736 CCDC174Q6PII3 467 aa12.81□□□□□ -0.36
PRPF40B-203ENST00000508736 CCDC170Q8IYT3 715 aa12.81□□□□□ -0.36
PRPF40B-203ENST00000508736 KIAA0895Q8NCT3 520 aa12.81□□□□□ -0.36
PRPF40B-203ENST00000508736 GGA3Q9NZ52 723 aa12.81□□□□□ -0.36
PRPF40B-203ENST00000508736 ZNF536O15090 1300 aa12.81□□□□□ -0.36
PRPF40B-203ENST00000508736 MSH4O15457 936 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 CFBP00751 764 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 RPA1P27694 616 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 INPP5BP32019 993 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 ECM1Q16610 540 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 ZNF662Q6ZS27 426 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 KCNK18Q7Z418 384 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 SCYL3Q8IZE3 742 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 DCPSQ96C86 337 aaKnown RBP12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 TTYH3Q9C0H2 523 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 AS3MTQ9HBK9 375 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 GPBP1L1Q9HC44 474 aaPredicted RBP12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 ARFGAP3Q9NP61 516 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 SLC39A2Q9NP94 309 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 BMP2KQ9NSY1 1161 aaPredicted RBP12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 FHOD1Q9Y613 1164 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 DOCK1Q14185 1865 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 WDR90Q96KV7 1748 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 PITPNM2Q9BZ72 1349 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 KRT86O43790 486 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 POTEIP0CG38 1075 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 POTEJP0CG39 1038 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 YY1P25490 414 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 HSD17B4P51659 736 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 CDK17Q00537 523 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 BRD3Q15059 726 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 NBPF12Q5TAG4 269 aaPredicted RBP12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 KIAA1328Q86T90 577 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 CCDC84Q86UT8 332 aaPredicted RBP12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 DDX12PQ92771 950 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 DNAJC19Q96DA6 116 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 CHP1Q99653 195 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 FBXO28Q9NVF7 368 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 VAV3Q9UKW4 847 aa12.8□□□□□ -0.36
PRPF40B-203ENST00000508736 SCN4AP35499 1836 aa12.79□□□□□ -0.36
PRPF40B-203ENST00000508736 A0A0U1RQJ8 604 aa12.79□□□□□ -0.36
PRPF40B-203ENST00000508736 CCDC151A5D8V7 595 aa12.79□□□□□ -0.36
PRPF40B-203ENST00000508736 TUBBP07437 444 aa12.79□□□□□ -0.36
PRPF40B-203ENST00000508736 IDEP14735 1019 aa12.79□□□□□ -0.36
PRPF40B-203ENST00000508736 MUTP22033 750 aa12.79□□□□□ -0.36
PRPF40B-203ENST00000508736 ZNF76P36508 570 aa12.79□□□□□ -0.36
PRPF40B-203ENST00000508736 SETQ01105 290 aaPredicted RBP12.79□□□□□ -0.36
PRPF40B-203ENST00000508736 MAN2A1Q16706 1144 aa12.79□□□□□ -0.36
PRPF40B-203ENST00000508736 MIIPQ5JXC2 388 aa12.79□□□□□ -0.36
PRPF40B-203ENST00000508736 CC2D1AQ6P1N0 951 aaPredicted RBP12.79□□□□□ -0.36
PRPF40B-203ENST00000508736 MCF2L2Q86YR7 1114 aa12.79□□□□□ -0.36
PRPF40B-203ENST00000508736 ZC3H15Q8WU90 426 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-203ENST00000508736 ATRIPQ8WXE1 791 aa12.79□□□□□ -0.36
PRPF40B-203ENST00000508736 GJA10Q969M2 543 aa12.79□□□□□ -0.36
PRPF40B-203ENST00000508736 POLR3CQ9BUI4 534 aaPredicted RBP12.79□□□□□ -0.36
PRPF40B-203ENST00000508736 SEMA6BQ9H3T3 888 aa12.79□□□□□ -0.36
PRPF40B-203ENST00000508736 SLC38A10Q9HBR0 1119 aa12.79□□□□□ -0.36
PRPF40B-203ENST00000508736 KIAA1024Q9UPX6 916 aa12.79□□□□□ -0.36
PRPF40B-203ENST00000508736 CTAGE15A4D2H0 777 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 EIF3CLB5ME19 914 aaKnown RBP12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 ERLIN1O75477 346 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 CTAGE8P0CG41 777 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 TAL1P17542 331 aaPredicted RBP12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 BACE1P56817 501 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 VWA3BQ502W6 1294 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 CCDC122Q5T0U0 273 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 WDR59Q6PJI9 974 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 DYMQ7RTS9 669 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 CTAGE6Q86UF2 777 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 CATSPER3Q86XQ3 398 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 CTAGE4Q8IX94 777 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 TBC1D5Q92609 795 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 SLC5A5Q92911 643 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 C12orf42Q96LP6 360 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 EIF3CQ99613 913 aaKnown RBP12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 PARD6BQ9BYG5 372 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 TSGA10Q9BZW7 698 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 CCPG1Q9ULG6 757 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 PPP1R9AQ9ULJ8 1098 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 MYO6Q9UM54 1294 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 GUCA1BQ9UMX6 200 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 RPTORQ8N122 1335 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 POTEB3A0JP26 581 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 MED24O75448 989 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 KIF20AO95235 890 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 PLA2G4BP0C869 781 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 SPATA31C1P0DKV0 1188 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 VCAM1P19320 739 aa12.78□□□□□ -0.36
PRPF40B-203ENST00000508736 CEP55Q53EZ4 464 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms