RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 FOSP01100 380 aaPredicted RBP12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 CCNE1P24864 410 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 ZBED6P86452 979 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 PDE4DQ08499 809 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 TMEM119Q4V9L6 283 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 ANGEL2Q5VTE6 544 aaKnown RBP12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 SV2BQ7L1I2 683 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 DYMQ7RTS9 669 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 GOLGA5Q8TBA6 731 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 FAM71BQ8TC56 605 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 TRPM4Q8TD43 1214 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 ZNF526Q8TF50 670 aaPredicted RBP12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 RAD54LQ92698 747 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 NAP1L4Q99733 375 aaKnown RBP12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 ZSWIM4Q9H7M6 989 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 GPBP1L1Q9HC44 474 aaPredicted RBP12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 STK17AQ9UEE5 414 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 SAR1BQ9Y6B6 198 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 EIF3CLB5ME19 914 aaKnown RBP12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 FGFR1OPO95684 399 aaKnown RBP12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 HNRNPH2P55795 449 aaKnown RBP12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 UBXN2AP68543 259 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 SPIRE1Q08AE8 756 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 TTI2Q6NXR4 508 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 MOXD1Q6UVY6 613 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 RUBCNQ92622 972 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 EEF2KMTQ96G04 330 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 PNKPQ96T60 521 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 EIF3CQ99613 913 aaKnown RBP12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 ABCB6Q9NP58 842 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 FEM1BQ9UK73 627 aa12.2□□□□□ -0.46
SH3RF1-203ENST00000508685 POTEB3A0JP26 581 aa12.19□□□□□ -0.46
SH3RF1-203ENST00000508685 POTECB2RU33 542 aa12.19□□□□□ -0.46
SH3RF1-203ENST00000508685 MTMR2Q13614 643 aa12.19□□□□□ -0.46
SH3RF1-203ENST00000508685 Q4G0T1 1027 aa12.19□□□□□ -0.46
SH3RF1-203ENST00000508685 CCDC122Q5T0U0 273 aa12.19□□□□□ -0.46
SH3RF1-203ENST00000508685 FKBP15Q5T1M5 1219 aa12.19□□□□□ -0.46
SH3RF1-203ENST00000508685 MCTP2Q6DN12 878 aa12.19□□□□□ -0.46
SH3RF1-203ENST00000508685 POTEBQ6S5H4 581 aa12.19□□□□□ -0.46
SH3RF1-203ENST00000508685 FAM160B2Q86V87 743 aa12.19□□□□□ -0.46
SH3RF1-203ENST00000508685 LDHDQ86WU2 507 aa12.19□□□□□ -0.46
SH3RF1-203ENST00000508685 CSGALNACT2Q8N6G5 542 aa12.19□□□□□ -0.46
SH3RF1-203ENST00000508685 P2RX5Q93086 422 aa12.19□□□□□ -0.46
SH3RF1-203ENST00000508685 ZKSCAN4Q969J2 545 aaPredicted RBP12.19□□□□□ -0.46
SH3RF1-203ENST00000508685 AGBL1Q96MI9 1066 aa12.19□□□□□ -0.46
SH3RF1-203ENST00000508685 CHP1Q99653 195 aa12.19□□□□□ -0.46
SH3RF1-203ENST00000508685 TUBGCP2Q9BSJ2 902 aa12.19□□□□□ -0.46
SH3RF1-203ENST00000508685 GUCA1BQ9UMX6 200 aa12.19□□□□□ -0.46
SH3RF1-203ENST00000508685 ZNF536O15090 1300 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 ABCB11O95342 1321 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 RNF225M0QZC1 329 aaPredicted RBP12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 MSH4O15457 936 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 CTNND1O60716 968 aaKnown RBP12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 PLA2G6O60733 806 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 IVLP07476 585 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 USP14P54578 494 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 CASP8Q14790 479 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 CCDC70Q6NSX1 233 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 CNNM4Q6P4Q7 775 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 SLC30A10Q6XR72 485 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 KIAA1328Q86T90 577 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 SLFN12Q8IYM2 578 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 KIAA0895Q8NCT3 520 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 DDX12PQ92771 950 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 ZFP91Q96JP5 570 aaPredicted RBP12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 ERGIC2Q96RQ1 377 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 LRRC27Q9C0I9 530 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 ZCCHC17Q9NP64 241 aaKnown RBP12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 SLC39A2Q9NP94 309 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 KIAA1024Q9UPX6 916 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 IGLV3-22A0A075B6J6 115 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 A0A0U1RQJ8 604 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 POTEFA5A3E0 1075 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 E9PMD0 336 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 GCOM1H8Y6P7 765 aaPredicted RBP12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 TULP2O00295 520 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 MED24O75448 989 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 RHOXF2BP0C7M4 288 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 POLR2MP0CAP2 368 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 POTEIP0CG38 1075 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 TRIM21P19474 475 aaKnown RBP12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 TBC1D8BQ0IIM8 1120 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 DPY19L2Q6NUT2 758 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 FOXR2Q6PJQ5 311 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 POTEGQ6S5H5 508 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 POTEEQ6S8J3 1075 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 LEKR1Q6ZMV7 388 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 ATRIPQ8WXE1 791 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 JAKMIP2Q96AA8 810 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 RHOXF2Q9BQY4 288 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 TANGO6Q9C0B7 1094 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 KIAA1683Q9H0B3 1180 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 PDE11AQ9HCR9 933 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 GGA3Q9NZ52 723 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 GPRC5DQ9NZD1 345 aa12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 REXO2Q9Y3B8 237 aaKnown RBP12.18□□□□□ -0.46
SH3RF1-203ENST00000508685 GLTPD2A6NH11 291 aa12.17□□□□□ -0.46
SH3RF1-203ENST00000508685 WDR46O15213 610 aaKnown RBP12.17□□□□□ -0.46
SH3RF1-203ENST00000508685 USO1O60763 962 aaKnown RBP12.17□□□□□ -0.46
SH3RF1-203ENST00000508685 RPS6KA5O75582 802 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms