RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 OXR1Q8N573 874 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 NAT16Q8N8M0 369 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 PDZD8Q8NEN9 1154 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 FLAD1Q8NFF5 587 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 ABHD4Q8TB40 342 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 LINC01599Q8WXQ3 324 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 MAP6Q96JE9 813 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 HHIPL1Q96JK4 782 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 ERVK13-1Q9NX77 482 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 STK32BQ9NY57 414 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 EMC9Q9Y3B6 208 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 NSD2O96028 1365 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 RGPD2P0DJD1 1756 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 PAPPAQ13219 1627 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 NCAPD2Q15021 1401 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 PCDH11XQ9BZA7 1347 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 PCDH11YQ9BZA8 1340 aa4.72□□□□□ -1.65
UBE2D3-226ENST00000508635 CASZ1Q86V15 1759 aa4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 CYP27B1O15528 508 aa4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 PSPNO60542 156 aa4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 ZBTB7AO95365 584 aa4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 HPXP02790 462 aa4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 TNNT2P45379 298 aaPredicted RBP4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 ZNF143P52747 638 aaPredicted RBP4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 RBL2Q08999 1139 aa4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 KCNMB1Q16558 191 aa4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 ZNF827Q17R98 1081 aa4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 SLC10A6Q3KNW5 377 aa4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 ANKS4BQ8N8V4 417 aa4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 TMEM52Q8NDY8 209 aa4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 BTN2A2Q8WVV5 523 aa4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 FAM168AQ92567 244 aa4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 FCRL2Q96LA5 508 aaPredicted RBP4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 DRC1Q96MC2 740 aa4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 SP110Q9HB58 689 aa4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 GPR160Q9UJ42 338 aa4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 SHANK3Q9BYB0 1731 aa4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 ANKRD26Q9UPS8 1709 aa4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 KIF7Q2M1P5 1343 aa4.71□□□□□ -1.66
UBE2D3-226ENST00000508635 BTAF1O14981 1849 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 FITM1A5D6W6 292 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 C2orf71A6NGG8 1288 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 AURKAO14965 403 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 EFEMP2O95967 443 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 RAP1GAPP47736 663 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 SEPHS1P49903 392 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 RTP1P59025 263 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 EIF4A2Q14240 407 aaKnown RBP4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 KIR3DS1Q14943 382 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 TMEM67Q5HYA8 995 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 GTF2IRD2BQ6EKJ0 949 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 POMZP3Q6PJE2 187 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 GTF2IRD2Q86UP8 949 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 ZNF227Q86WZ6 799 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 ZSWIM9Q86XI8 627 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 SPPL2CQ8IUH8 684 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 CILP2Q8IUL8 1156 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 TRIM59Q8IWR1 403 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 ARMC5Q96C12 935 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 MRGPRX3Q96LB0 322 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 MTFR1LQ9H019 292 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 RNF32Q9H0A6 362 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 GPRC5CQ9NQ84 441 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 BACE2Q9Y5Z0 518 aa4.7□□□□□ -1.66
UBE2D3-226ENST00000508635 DOT1LQ8TEK3 1739 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 NOTOA8MTQ0 251 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 FADS2P1A8MWK0 482 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 FGF10O15520 208 aaPredicted RBP4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 ENDOUP21128 410 aaKnown RBP4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 CFPP27918 469 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 ECI1P42126 302 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 KIR2DL1P43626 348 aaPredicted RBP4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 KIR2DL2P43627 348 aaPredicted RBP4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 CHRNEQ04844 493 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 SCRN1Q12765 414 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 GRB10Q13322 594 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 LAPTM5Q13571 262 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 SF1Q15637 639 aaKnown RBP4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 SPATC1Q76KD6 591 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 MORC1Q86VD1 984 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 CPNE8Q86YQ8 564 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 JAMLQ86YT9 394 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 CRACR2BQ8N4Y2 399 aaPredicted RBP4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 LIN37Q96GY3 246 aaPredicted RBP4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 PTCHD1Q96NR3 888 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 PLCD4Q9BRC7 762 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 TFCP2L1Q9NZI6 479 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 SIRPGQ9P1W8 387 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 TNFRSF10DQ9UBN6 386 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 PFDN2Q9UHV9 154 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 CCNL1Q9UK58 526 aaPredicted RBP4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 KNSTRNQ9Y448 316 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 PNPLA7Q6ZV29 1317 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 IGSF1Q8N6C5 1336 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 PKD1L3Q7Z443 1732 aa4.69□□□□□ -1.66
UBE2D3-226ENST00000508635 PALLDQ8WX93 1383 aa4.68□□□□□ -1.66
UBE2D3-226ENST00000508635 PLEKHG2Q9H7P9 1386 aa4.68□□□□□ -1.66
UBE2D3-226ENST00000508635 MAP2P11137 1827 aaKnown RBP4.68□□□□□ -1.66
UBE2D3-226ENST00000508635 A0A1W2PQU0 124 aa4.68□□□□□ -1.66
UBE2D3-226ENST00000508635 FAM221BA6H8Z2 402 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms