RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 TCHHQ07283 1943 aa12.39□□□□□ -0.43
BRCC3P1-201ENST00000508559 MCM3APO60318 1980 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 A0A1B0GVL5 298 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 PP2D1A8MPX8 630 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 DHX15O43143 795 aaKnown RBP12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 DYNC1LI2O43237 492 aaPredicted RBP12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 ARIH2O95376 493 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 MYCNP04198 464 aaPredicted RBP12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 INHAP05111 366 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 ZNF865P0CJ78 1059 aaPredicted RBP12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 RARBP10826 455 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 CDC25AP30304 524 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 ACTR2P61160 394 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 SP2Q02086 613 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 TRIM32Q13049 653 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 EPHA7Q15375 998 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 AXDND1Q5T1B0 1012 aaPredicted RBP12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 FAM160B1Q5W0V3 765 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 RESP18Q5W5W9 173 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 CCDC62Q6P9F0 684 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 RDM1Q8NG50 284 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 COPS5Q92905 334 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 CCDC34Q96HJ3 373 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 EPSTI1Q96J88 318 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 CCDC43Q96MW1 224 aaKnown RBP12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 PYM1Q9BRP8 204 aaKnown RBP12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 PANK2Q9BZ23 570 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 KATNBL1Q9H079 304 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 AZI2Q9H6S1 392 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 LMBRD1Q9NUN5 540 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 VAV3Q9UKW4 847 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 PCDHA10Q9Y5I2 948 aa12.38□□□□□ -0.43
BRCC3P1-201ENST00000508559 KDM3AQ9Y4C1 1321 aa12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 SEPT4O43236 478 aa12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 DKC1O60832 514 aaKnown RBP eCLIP12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 FARP2O94887 1054 aaPredicted RBP12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 MBD3O95983 291 aa12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 CYBAP13498 195 aa12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 SMPD1P17405 629 aa12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 NFKBIBQ15653 356 aa12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 PKN2Q16513 984 aaKnown RBP12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 GJC2Q5T442 439 aaPredicted RBP12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 UTP14CQ5TAP6 766 aaKnown RBP12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 RRAGBQ5VZM2 374 aa12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 SHC4Q6S5L8 630 aa12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 TLK2Q86UE8 772 aa12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 TPH2Q8IWU9 490 aa12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 CKAP2LQ8IYA6 745 aa12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 PDILTQ8N807 584 aa12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 NEK9Q8TD19 979 aa12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 SH3TC2Q8TF17 1288 aa12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 SEPT1Q8WYJ6 367 aa12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 EIF2AK1Q9BQI3 630 aaKnown RBP12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 NT5C3AQ9H0P0 336 aa12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 HMX1Q9NP08 348 aaPredicted RBP12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 KCNH3Q9ULD8 1083 aa12.37□□□□□ -0.43
BRCC3P1-201ENST00000508559 CASP8AP2Q9UKL3 1982 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 EML1O00423 815 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 SLC26A4O43511 780 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 ZEB2O60315 1214 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 KINO60870 393 aaKnown RBP12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 CCNE2O96020 404 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 P4HBP07237 508 aaKnown RBP12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 SUPT20HL2P0C7V6 817 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 PFKFB1P16118 471 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 CCND3P30281 292 aaPredicted RBP12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 STAT6P42226 847 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 SYKP43405 635 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 CPT1AP50416 773 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 CYP4A11Q02928 519 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 ARHGAP1Q07960 439 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 KARSQ15046 597 aaKnown RBP12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 SKOR2Q2VWA4 1001 aaPredicted RBP12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 SWSAP1Q6NVH7 229 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 FBXO46Q6PJ61 603 aaPredicted RBP12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 CEP57L1Q8IYX8 460 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 TRPV1Q8NER1 839 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 AFG1LQ8WV93 481 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 GLG1Q92896 1179 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 ATP6V0A1Q93050 837 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 DYDC2Q96IM9 177 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 PLIN2Q99541 437 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 BCAS3Q9H6U6 928 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 TUFT1Q9NNX1 390 aa12.36□□□□□ -0.43
BRCC3P1-201ENST00000508559 KIAA1217Q5T5P2 1943 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 POLR2DO15514 142 aaKnown RBP12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 MSCO60682 206 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 DUSP11O75319 330 aaKnown RBP12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 MYCP01106 439 aaPredicted RBP12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 SSBP05455 408 aaKnown RBP eCLIP12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 C6orf222P0C671 652 aaPredicted RBP12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 RPA1P27694 616 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 TCF7P36402 384 aaPredicted RBP12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 QARSP47897 775 aaKnown RBP12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 NDUFA8P51970 172 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 FAM160A1Q05DH4 1040 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 SPIRE1Q08AE8 756 aa12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 CTTNQ14247 550 aaKnown RBP12.35□□□□□ -0.43
BRCC3P1-201ENST00000508559 DGKDQ16760 1214 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms