RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 PMLP29590 882 aa8.12□□□□□ -1.11
HERC4-213ENST00000506515 GRIN1Q05586 938 aa8.12□□□□□ -1.11
HERC4-213ENST00000506515 NR1I3Q14994 352 aa8.12□□□□□ -1.11
HERC4-213ENST00000506515 ZNF174Q15697 407 aa8.12□□□□□ -1.11
HERC4-213ENST00000506515 KCNMB1Q16558 191 aa8.12□□□□□ -1.11
HERC4-213ENST00000506515 BRDTQ58F21 947 aaPredicted RBP8.12□□□□□ -1.11
HERC4-213ENST00000506515 BTBD8Q5XKL5 378 aa8.12□□□□□ -1.11
HERC4-213ENST00000506515 CREB3L3Q68CJ9 461 aa8.12□□□□□ -1.11
HERC4-213ENST00000506515 CBLL1Q75N03 491 aa8.12□□□□□ -1.11
HERC4-213ENST00000506515 SPATS2Q86XZ4 545 aaKnown RBP8.12□□□□□ -1.11
HERC4-213ENST00000506515 PHOSPHO1Q8TCT1 267 aa8.12□□□□□ -1.11
HERC4-213ENST00000506515 CLEC4DQ8WXI8 215 aa8.12□□□□□ -1.11
HERC4-213ENST00000506515 BCAS3Q9H6U6 928 aa8.12□□□□□ -1.11
HERC4-213ENST00000506515 RIC8BQ9NVN3 520 aa8.12□□□□□ -1.11
HERC4-213ENST00000506515 WASHC2CQ9Y4E1 1318 aa8.11□□□□□ -1.11
HERC4-213ENST00000506515 TCRBV5S2A0A599 114 aa8.11□□□□□ -1.11
HERC4-213ENST00000506515 OR14I1A6ND48 311 aa8.11□□□□□ -1.11
HERC4-213ENST00000506515 DVL2O14641 736 aa8.11□□□□□ -1.11
HERC4-213ENST00000506515 CLASP2O75122 1294 aaKnown RBP8.11□□□□□ -1.11
HERC4-213ENST00000506515 KATNA1O75449 491 aa8.11□□□□□ -1.11
HERC4-213ENST00000506515 KIF11P52732 1056 aa8.11□□□□□ -1.11
HERC4-213ENST00000506515 PRR5P85299 388 aa8.11□□□□□ -1.11
HERC4-213ENST00000506515 ZSWIM9Q86XI8 627 aa8.11□□□□□ -1.11
HERC4-213ENST00000506515 KIAA1958Q8N8K9 716 aa8.11□□□□□ -1.11
HERC4-213ENST00000506515 ARRDC4Q8NCT1 418 aa8.11□□□□□ -1.11
HERC4-213ENST00000506515 COG1Q8WTW3 980 aa8.11□□□□□ -1.11
HERC4-213ENST00000506515 PCIF1Q9H4Z3 704 aa8.11□□□□□ -1.11
HERC4-213ENST00000506515 TYW1Q9NV66 732 aaKnown RBP8.11□□□□□ -1.11
HERC4-213ENST00000506515 KLHL14Q9P2G3 628 aa8.11□□□□□ -1.11
HERC4-213ENST00000506515 EIF4G1Q04637 1599 aaKnown RBP8.1□□□□□ -1.11
HERC4-213ENST00000506515 DCAF1Q9Y4B6 1507 aa8.1□□□□□ -1.11
HERC4-213ENST00000506515 BIN1O00499 593 aa8.1□□□□□ -1.11
HERC4-213ENST00000506515 ZBTB7AO95365 584 aa8.1□□□□□ -1.11
HERC4-213ENST00000506515 GLI1P08151 1106 aa8.1□□□□□ -1.11
HERC4-213ENST00000506515 PTPN1P18031 435 aaKnown RBP8.1□□□□□ -1.11
HERC4-213ENST00000506515 TMEM132BQ14DG7 1078 aa8.1□□□□□ -1.11
HERC4-213ENST00000506515 SEC23AQ15436 765 aa8.1□□□□□ -1.11
HERC4-213ENST00000506515 PLEKHG6Q3KR16 790 aa8.1□□□□□ -1.11
HERC4-213ENST00000506515 IQSEC1Q6DN90 963 aa8.1□□□□□ -1.11
HERC4-213ENST00000506515 HDGFL2Q7Z4V5 671 aaPredicted RBP8.1□□□□□ -1.11
HERC4-213ENST00000506515 TRIM48Q8IWZ4 208 aa8.1□□□□□ -1.11
HERC4-213ENST00000506515 EFHBQ8N7U6 833 aa8.1□□□□□ -1.11
HERC4-213ENST00000506515 CEP89Q96ST8 783 aa8.1□□□□□ -1.11
HERC4-213ENST00000506515 TOMM22Q9NS69 142 aa8.1□□□□□ -1.11
HERC4-213ENST00000506515 FAM90A27PA6NNH2 459 aa8.09□□□□□ -1.11
HERC4-213ENST00000506515 MAPKAPK2P49137 400 aa8.09□□□□□ -1.11
HERC4-213ENST00000506515 EPHA5P54756 1037 aa8.09□□□□□ -1.11
HERC4-213ENST00000506515 EXOSC10Q01780 885 aaKnown RBP8.09□□□□□ -1.11
HERC4-213ENST00000506515 ITKQ08881 620 aa8.09□□□□□ -1.11
HERC4-213ENST00000506515 PLEKHN1Q494U1 663 aaPredicted RBP8.09□□□□□ -1.11
HERC4-213ENST00000506515 ZC3H14Q6PJT7 736 aaKnown RBP8.09□□□□□ -1.11
HERC4-213ENST00000506515 NECAB2Q7Z6G3 386 aa8.09□□□□□ -1.11
HERC4-213ENST00000506515 NBPF11Q86T75 865 aa8.09□□□□□ -1.11
HERC4-213ENST00000506515 PASD1Q8IV76 773 aa8.09□□□□□ -1.11
HERC4-213ENST00000506515 MTMR8Q96EF0 704 aa8.09□□□□□ -1.11
HERC4-213ENST00000506515 ELF4Q99607 663 aaPredicted RBP8.09□□□□□ -1.11
HERC4-213ENST00000506515 SPO11Q9Y5K1 396 aa8.09□□□□□ -1.11
HERC4-213ENST00000506515 B3GALT1Q9Y5Z6 326 aa8.09□□□□□ -1.11
HERC4-213ENST00000506515 PRAMEF25A6NGN4 478 aa8.08□□□□□ -1.12
HERC4-213ENST00000506515 TGM5O43548 720 aa8.08□□□□□ -1.12
HERC4-213ENST00000506515 BUB1BO60566 1050 aaPredicted RBP8.08□□□□□ -1.12
HERC4-213ENST00000506515 TMEM62Q0P6H9 643 aa8.08□□□□□ -1.12
HERC4-213ENST00000506515 MTMR1Q13613 665 aa8.08□□□□□ -1.12
HERC4-213ENST00000506515 SLC9A5Q14940 896 aa8.08□□□□□ -1.12
HERC4-213ENST00000506515 DDB1Q16531 1140 aa8.08□□□□□ -1.12
HERC4-213ENST00000506515 DLG3Q92796 817 aa8.08□□□□□ -1.12
HERC4-213ENST00000506515 TSPAN17Q96FV3 270 aa8.08□□□□□ -1.12
HERC4-213ENST00000506515 YIPF4Q9BSR8 244 aa8.08□□□□□ -1.12
HERC4-213ENST00000506515 KCNH7Q9NS40 1196 aa8.08□□□□□ -1.12
HERC4-213ENST00000506515 ULK1O75385 1050 aa8.07□□□□□ -1.12
HERC4-213ENST00000506515 PTX3P26022 381 aaPredicted RBP8.07□□□□□ -1.12
HERC4-213ENST00000506515 GJA4P35212 333 aa8.07□□□□□ -1.12
HERC4-213ENST00000506515 BROXQ5VW32 411 aa8.07□□□□□ -1.12
HERC4-213ENST00000506515 MPZL3Q6UWV2 235 aa8.07□□□□□ -1.12
HERC4-213ENST00000506515 IRF2BP1Q8IU81 584 aa8.07□□□□□ -1.12
HERC4-213ENST00000506515 CNTD1Q8N815 330 aa8.07□□□□□ -1.12
HERC4-213ENST00000506515 ALG3Q92685 438 aa8.07□□□□□ -1.12
HERC4-213ENST00000506515 SLC5A5Q92911 643 aa8.07□□□□□ -1.12
HERC4-213ENST00000506515 TRIM8Q9BZR9 551 aa8.07□□□□□ -1.12
HERC4-213ENST00000506515 CCDC8Q9H0W5 538 aaPredicted RBP8.07□□□□□ -1.12
HERC4-213ENST00000506515 IRF2BPLQ9H1B7 796 aa8.07□□□□□ -1.12
HERC4-213ENST00000506515 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.06□□□□□ -1.12
HERC4-213ENST00000506515 PRKD3O94806 890 aa8.06□□□□□ -1.12
HERC4-213ENST00000506515 PAPLNO95428 1278 aa8.06□□□□□ -1.12
HERC4-213ENST00000506515 C4BPAP04003 597 aaKnown RBP8.06□□□□□ -1.12
HERC4-213ENST00000506515 S100BP04271 92 aaPredicted RBP8.06□□□□□ -1.12
HERC4-213ENST00000506515 PAN2Q504Q3 1202 aaKnown RBP8.06□□□□□ -1.12
HERC4-213ENST00000506515 CC2D1AQ6P1N0 951 aaPredicted RBP8.06□□□□□ -1.12
HERC4-213ENST00000506515 TMC6Q7Z403 805 aa8.06□□□□□ -1.12
HERC4-213ENST00000506515 ZNF605Q86T29 641 aa8.06□□□□□ -1.12
HERC4-213ENST00000506515 SCYL1Q96KG9 808 aa8.06□□□□□ -1.12
HERC4-213ENST00000506515 SMAD5Q99717 465 aaKnown RBP8.06□□□□□ -1.12
HERC4-213ENST00000506515 PUS7LQ9H0K6 701 aaKnown RBP8.06□□□□□ -1.12
HERC4-213ENST00000506515 VTA1Q9NP79 307 aa8.06□□□□□ -1.12
HERC4-213ENST00000506515 ACSS2Q9NR19 701 aa8.06□□□□□ -1.12
HERC4-213ENST00000506515 KLHL42Q9P2K6 505 aa8.06□□□□□ -1.12
HERC4-213ENST00000506515 PLA2G2DQ9UNK4 145 aa8.06□□□□□ -1.12
HERC4-213ENST00000506515 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.05□□□□□ -1.12
HERC4-213ENST00000506515 ACOT7O00154 380 aa8.05□□□□□ -1.12
HERC4-213ENST00000506515 ABLIM1O14639 778 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms