RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 SENP7Q9BQF6 1050 aa19.18■□□□□ 0.66
PDLIM7-215ENST00000506161 PRDM12Q9H4Q4 367 aa19.18■□□□□ 0.66
PDLIM7-215ENST00000506161 JADE2Q9NQC1 790 aa19.18■□□□□ 0.66
PDLIM7-215ENST00000506161 SETD4Q9NVD3 440 aa19.18■□□□□ 0.66
PDLIM7-215ENST00000506161 PPP4R2Q9NY27 417 aa19.18■□□□□ 0.66
PDLIM7-215ENST00000506161 SLC4A7Q9Y6M7 1214 aa19.18■□□□□ 0.66
PDLIM7-215ENST00000506161 SPDYE3A6NKU9 549 aa19.17■□□□□ 0.66
PDLIM7-215ENST00000506161 EDIL3O43854 480 aa19.17■□□□□ 0.66
PDLIM7-215ENST00000506161 REC8O95072 547 aa19.17■□□□□ 0.66
PDLIM7-215ENST00000506161 PDIA3P30101 505 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-215ENST00000506161 RFC2P35250 354 aa19.17■□□□□ 0.66
PDLIM7-215ENST00000506161 ADCY7P51828 1080 aa19.17■□□□□ 0.66
PDLIM7-215ENST00000506161 CCT2P78371 535 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-215ENST00000506161 DEFB103AP81534 67 aa19.17■□□□□ 0.66
PDLIM7-215ENST00000506161 PFKFB3Q16875 520 aaPredicted RBP19.17■□□□□ 0.66
PDLIM7-215ENST00000506161 PPP1R18Q6NYC8 613 aa19.17■□□□□ 0.66
PDLIM7-215ENST00000506161 NLRX1Q86UT6 975 aa19.17■□□□□ 0.66
PDLIM7-215ENST00000506161 SERINC5Q86VE9 423 aa19.17■□□□□ 0.66
PDLIM7-215ENST00000506161 CRYGNQ8WXF5 182 aa19.17■□□□□ 0.66
PDLIM7-215ENST00000506161 ZBTB10Q96DT7 871 aa19.17■□□□□ 0.66
PDLIM7-215ENST00000506161 UIMC1Q96RL1 719 aa19.17■□□□□ 0.66
PDLIM7-215ENST00000506161 UPF3BQ9BZI7 483 aaKnown RBP19.17■□□□□ 0.66
PDLIM7-215ENST00000506161 ZSWIM6Q9HCJ5 1215 aa19.17■□□□□ 0.66
PDLIM7-215ENST00000506161 CHD7Q9P2D1 2997 aa19.16■□□□□ 0.66
PDLIM7-215ENST00000506161 NOP56O00567 594 aaKnown RBP19.16■□□□□ 0.66
PDLIM7-215ENST00000506161 CXCL10P02778 98 aa19.16■□□□□ 0.66
PDLIM7-215ENST00000506161 PFKMP08237 780 aa19.16■□□□□ 0.66
PDLIM7-215ENST00000506161 SCG2P13521 617 aa19.16■□□□□ 0.66
PDLIM7-215ENST00000506161 ATP2A2P16615 1042 aaKnown RBP19.16■□□□□ 0.66
PDLIM7-215ENST00000506161 TCF7P36402 384 aaPredicted RBP19.16■□□□□ 0.66
PDLIM7-215ENST00000506161 EVCP57679 992 aa19.16■□□□□ 0.66
PDLIM7-215ENST00000506161 ITGB3BPQ13352 177 aaPredicted RBP19.16■□□□□ 0.66
PDLIM7-215ENST00000506161 MTMR1Q13613 665 aa19.16■□□□□ 0.66
PDLIM7-215ENST00000506161 JAKMIP3Q5VZ66 844 aa19.16■□□□□ 0.66
PDLIM7-215ENST00000506161 RASGRP4Q8TDF6 673 aa19.16■□□□□ 0.66
PDLIM7-215ENST00000506161 MXRA8Q9BRK3 442 aa19.16■□□□□ 0.66
PDLIM7-215ENST00000506161 FTOQ9C0B1 505 aaKnown RBP eCLIP19.16■□□□□ 0.66
PDLIM7-215ENST00000506161 C17orf102A2RUQ5 167 aa19.15■□□□□ 0.66
PDLIM7-215ENST00000506161 FGD1P98174 961 aa19.15■□□□□ 0.66
PDLIM7-215ENST00000506161 RUFY3Q7L099 469 aa19.15■□□□□ 0.66
PDLIM7-215ENST00000506161 LMBR1Q8WVP7 490 aa19.15■□□□□ 0.66
PDLIM7-215ENST00000506161 ATP6V0A1Q93050 837 aa19.15■□□□□ 0.66
PDLIM7-215ENST00000506161 C1QTNF1Q9BXJ1 281 aa19.15■□□□□ 0.66
PDLIM7-215ENST00000506161 KCNH7Q9NS40 1196 aa19.15■□□□□ 0.66
PDLIM7-215ENST00000506161 EVPLQ92817 2033 aa19.15■□□□□ 0.66
PDLIM7-215ENST00000506161 MYH9P35579 1960 aaKnown RBP19.14■□□□□ 0.65
PDLIM7-215ENST00000506161 EPOPA6NHQ4 379 aa19.14■□□□□ 0.65
PDLIM7-215ENST00000506161 FAM86B1E9PN63 330 aa19.14■□□□□ 0.65
PDLIM7-215ENST00000506161 PRPF3O43395 683 aaKnown RBP19.14■□□□□ 0.65
PDLIM7-215ENST00000506161 FAM86B2P0C5J1 330 aa19.14■□□□□ 0.65
PDLIM7-215ENST00000506161 MARK3P27448 753 aa19.14■□□□□ 0.65
PDLIM7-215ENST00000506161 SREBF1P36956 1147 aa19.14■□□□□ 0.65
PDLIM7-215ENST00000506161 WDR5P61964 334 aaKnown RBP19.14■□□□□ 0.65
PDLIM7-215ENST00000506161 MKRN4PQ13434 485 aaPredicted RBP19.14■□□□□ 0.65
PDLIM7-215ENST00000506161 RUFY4Q6ZNE9 571 aa19.14■□□□□ 0.65
PDLIM7-215ENST00000506161 LCHNA4D1U4 455 aa19.13■□□□□ 0.65
PDLIM7-215ENST00000506161 hCG_1984214I3L0E3 225 aa19.13■□□□□ 0.65
PDLIM7-215ENST00000506161 RFXAPO00287 272 aa19.13■□□□□ 0.65
PDLIM7-215ENST00000506161 CA3P07451 260 aa19.13■□□□□ 0.65
PDLIM7-215ENST00000506161 RAB30Q15771 203 aa19.13■□□□□ 0.65
PDLIM7-215ENST00000506161 CCDC85BQ15834 202 aaPredicted RBP19.13■□□□□ 0.65
PDLIM7-215ENST00000506161 CCDC155Q8N6L0 562 aa19.13■□□□□ 0.65
PDLIM7-215ENST00000506161 ZNF713Q8N859 430 aaPredicted RBP19.13■□□□□ 0.65
PDLIM7-215ENST00000506161 ZMYND12Q9H0C1 365 aa19.13■□□□□ 0.65
PDLIM7-215ENST00000506161 MTIF3Q9H2K0 278 aaKnown RBP19.13■□□□□ 0.65
PDLIM7-215ENST00000506161 VPS54Q9P1Q0 977 aa19.13■□□□□ 0.65
PDLIM7-215ENST00000506161 MSRAQ9UJ68 235 aa19.13■□□□□ 0.65
PDLIM7-215ENST00000506161 PCDHA11Q9Y5I1 949 aa19.13■□□□□ 0.65
PDLIM7-215ENST00000506161 ATG2AQ2TAZ0 1938 aa19.12■□□□□ 0.65
PDLIM7-215ENST00000506161 NLRC5Q86WI3 1866 aa19.12■□□□□ 0.65
PDLIM7-215ENST00000506161 IGLV3-22A0A075B6J6 115 aa19.12■□□□□ 0.65
PDLIM7-215ENST00000506161 MEIS1O00470 390 aa19.12■□□□□ 0.65
PDLIM7-215ENST00000506161 CCNE2O96020 404 aa19.12■□□□□ 0.65
PDLIM7-215ENST00000506161 CTSHP09668 335 aa19.12■□□□□ 0.65
PDLIM7-215ENST00000506161 PSMA5P28066 241 aa19.12■□□□□ 0.65
PDLIM7-215ENST00000506161 THPOP40225 353 aa19.12■□□□□ 0.65
PDLIM7-215ENST00000506161 ARHGAP4P98171 946 aa19.12■□□□□ 0.65
PDLIM7-215ENST00000506161 MARCH8Q5T0T0 291 aa19.12■□□□□ 0.65
PDLIM7-215ENST00000506161 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.12■□□□□ 0.65
PDLIM7-215ENST00000506161 HERC6Q8IVU3 1022 aa19.12■□□□□ 0.65
PDLIM7-215ENST00000506161 AIFM3Q96NN9 605 aa19.12■□□□□ 0.65
PDLIM7-215ENST00000506161 SLC26A6Q9BXS9 759 aa19.12■□□□□ 0.65
PDLIM7-215ENST00000506161 CERS4Q9HA82 394 aa19.12■□□□□ 0.65
PDLIM7-215ENST00000506161 AGO4Q9HCK5 861 aaKnown RBP19.12■□□□□ 0.65
PDLIM7-215ENST00000506161 ESYT2A0FGR8 921 aa19.11■□□□□ 0.65
PDLIM7-215ENST00000506161 LGR5O75473 907 aa19.11■□□□□ 0.65
PDLIM7-215ENST00000506161 IFNAR1P17181 557 aa19.11■□□□□ 0.65
PDLIM7-215ENST00000506161 IGFBP4P22692 258 aa19.11■□□□□ 0.65
PDLIM7-215ENST00000506161 AP3B2Q13367 1082 aa19.11■□□□□ 0.65
PDLIM7-215ENST00000506161 CEP55Q53EZ4 464 aa19.11■□□□□ 0.65
PDLIM7-215ENST00000506161 CNKSR3Q6P9H4 555 aa19.11■□□□□ 0.65
PDLIM7-215ENST00000506161 DBF4BQ8NFT6 615 aa19.11■□□□□ 0.65
PDLIM7-215ENST00000506161 SEPT1Q8WYJ6 367 aa19.11■□□□□ 0.65
PDLIM7-215ENST00000506161 REV3LO60673 3130 aa19.1■□□□□ 0.65
PDLIM7-215ENST00000506161 RSPH10B2B2RC85 870 aa19.1■□□□□ 0.65
PDLIM7-215ENST00000506161 DDX39AO00148 427 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-215ENST00000506161 DHX15O43143 795 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-215ENST00000506161 EPB41L2O43491 1005 aaKnown RBP19.1■□□□□ 0.65
PDLIM7-215ENST00000506161 RSPH10BP0C881 870 aa19.1■□□□□ 0.65
PDLIM7-215ENST00000506161 ACTN1P12814 892 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms