RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 ANKRD7Q92527 254 aa19.13■□□□□ 0.65
TRAPPC11-204ENST00000505676 NUCKS1Q9H1E3 243 aaKnown RBP19.13■□□□□ 0.65
TRAPPC11-204ENST00000505676 PICK1Q9NRD5 415 aa19.13■□□□□ 0.65
TRAPPC11-204ENST00000505676 TRAF3IP3Q9Y228 551 aa19.13■□□□□ 0.65
TRAPPC11-204ENST00000505676 CYLC1P35663 651 aaPredicted RBP19.12■□□□□ 0.65
TRAPPC11-204ENST00000505676 KRT83P78385 493 aa19.12■□□□□ 0.65
TRAPPC11-204ENST00000505676 B3GNT9Q6UX72 402 aa19.12■□□□□ 0.65
TRAPPC11-204ENST00000505676 CLEC4DQ8WXI8 215 aa19.12■□□□□ 0.65
TRAPPC11-204ENST00000505676 LOXHD1Q8IVV2 1947 aa19.12■□□□□ 0.65
TRAPPC11-204ENST00000505676 RBBP6Q7Z6E9 1792 aaKnown RBP19.12■□□□□ 0.65
TRAPPC11-204ENST00000505676 TRAF5O00463 557 aa19.12■□□□□ 0.65
TRAPPC11-204ENST00000505676 EIF3DO15371 548 aaKnown RBP eCLIP19.12■□□□□ 0.65
TRAPPC11-204ENST00000505676 CALUO43852 315 aaPredicted RBP19.12■□□□□ 0.65
TRAPPC11-204ENST00000505676 VCAM1P19320 739 aa19.12■□□□□ 0.65
TRAPPC11-204ENST00000505676 HNRNPH3P31942 346 aaKnown RBP19.12■□□□□ 0.65
TRAPPC11-204ENST00000505676 GNG11P61952 73 aa19.12■□□□□ 0.65
TRAPPC11-204ENST00000505676 PABPC4Q13310 644 aaKnown RBP eCLIP19.12■□□□□ 0.65
TRAPPC11-204ENST00000505676 TBC1D10BQ4KMP7 808 aaPredicted RBP19.12■□□□□ 0.65
TRAPPC11-204ENST00000505676 TANGO6Q9C0B7 1094 aa19.12■□□□□ 0.65
TRAPPC11-204ENST00000505676 KCTD10Q9H3F6 313 aa19.12■□□□□ 0.65
TRAPPC11-204ENST00000505676 ODF2LQ9ULJ1 636 aa19.12■□□□□ 0.65
TRAPPC11-204ENST00000505676 PDXKO00764 312 aa19.11■□□□□ 0.65
TRAPPC11-204ENST00000505676 CETN3O15182 167 aa19.11■□□□□ 0.65
TRAPPC11-204ENST00000505676 FLOT1O75955 427 aa19.11■□□□□ 0.65
TRAPPC11-204ENST00000505676 BACE1P56817 501 aa19.11■□□□□ 0.65
TRAPPC11-204ENST00000505676 ERVK-24P63145 666 aa19.11■□□□□ 0.65
TRAPPC11-204ENST00000505676 RASSF7Q02833 373 aa19.11■□□□□ 0.65
TRAPPC11-204ENST00000505676 R3HDM1Q15032 1099 aaKnown RBP19.11■□□□□ 0.65
TRAPPC11-204ENST00000505676 EPM2AIP1Q7L775 607 aaPredicted RBP19.11■□□□□ 0.65
TRAPPC11-204ENST00000505676 SAMD7Q7Z3H4 446 aa19.11■□□□□ 0.65
TRAPPC11-204ENST00000505676 CYP2W1Q8TAV3 490 aa19.11■□□□□ 0.65
TRAPPC11-204ENST00000505676 SCFD1Q8WVM8 642 aa19.11■□□□□ 0.65
TRAPPC11-204ENST00000505676 TBC1D5Q92609 795 aa19.11■□□□□ 0.65
TRAPPC11-204ENST00000505676 PCMTD1Q96MG8 357 aaPredicted RBP19.11■□□□□ 0.65
TRAPPC11-204ENST00000505676 REEP2Q9BRK0 252 aa19.11■□□□□ 0.65
TRAPPC11-204ENST00000505676 PDCL3Q9H2J4 239 aa19.11■□□□□ 0.65
TRAPPC11-204ENST00000505676 IPO7O95373 1038 aaKnown RBP19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 RPL13P26373 211 aaKnown RBP19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 CCDC40Q4G0X9 1142 aa19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 ARHGAP29Q52LW3 1261 aa19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 NOL9Q5SY16 702 aaKnown RBP19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 GPC2Q8N158 579 aa19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 ZNF280CQ8ND82 737 aa19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 AGBL1Q96MI9 1066 aa19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 EPN1Q9Y6I3 576 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 IPO5O00410 1097 aaKnown RBP19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 EML1O00423 815 aa19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 NDUFA10O95299 355 aa19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 EGFRP00533 1210 aa19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 NFIL3Q16649 462 aa19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 KNOP1Q1ED39 458 aaKnown RBP19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 EHBP1Q8NDI1 1231 aa19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 BHMT2Q9H2M3 363 aa19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 TBC1D22BQ9NU19 505 aa19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 SIK3Q9Y2K2 1263 aa19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 UBIAD1Q9Y5Z9 338 aa19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 MYPNQ86TC9 1320 aa19.1■□□□□ 0.65
TRAPPC11-204ENST00000505676 SLITRK3O94933 977 aa19.09■□□□□ 0.65
TRAPPC11-204ENST00000505676 TAL1P17542 331 aaPredicted RBP19.09■□□□□ 0.65
TRAPPC11-204ENST00000505676 TUBB4BP68371 445 aa19.09■□□□□ 0.65
TRAPPC11-204ENST00000505676 MTMR2Q13614 643 aa19.09■□□□□ 0.65
TRAPPC11-204ENST00000505676 MTF1Q14872 753 aa19.09■□□□□ 0.65
TRAPPC11-204ENST00000505676 LRRC41Q15345 812 aa19.09■□□□□ 0.65
TRAPPC11-204ENST00000505676 TKFCQ3LXA3 575 aa19.09■□□□□ 0.65
TRAPPC11-204ENST00000505676 SUPT20HL1Q3ZLR7 823 aa19.09■□□□□ 0.65
TRAPPC11-204ENST00000505676 TXLNBQ8N3L3 684 aa19.09■□□□□ 0.65
TRAPPC11-204ENST00000505676 DESI2Q9BSY9 194 aa19.09■□□□□ 0.65
TRAPPC11-204ENST00000505676 HAUS4Q9H6D7 363 aa19.09■□□□□ 0.65
TRAPPC11-204ENST00000505676 RPAP3Q9H6T3 665 aaPredicted RBP19.09■□□□□ 0.65
TRAPPC11-204ENST00000505676 SLC16A3O15427 465 aaKnown RBP19.09■□□□□ 0.65
TRAPPC11-204ENST00000505676 NBPF12Q5TAG4 269 aaPredicted RBP19.09■□□□□ 0.65
TRAPPC11-204ENST00000505676 RINT1Q6NUQ1 792 aa19.09■□□□□ 0.65
TRAPPC11-204ENST00000505676 FRMD5Q7Z6J6 570 aa19.09■□□□□ 0.65
TRAPPC11-204ENST00000505676 MRPL44Q9H9J2 332 aaKnown RBP19.09■□□□□ 0.65
TRAPPC11-204ENST00000505676 METTL14Q9HCE5 456 aaKnown RBP19.09■□□□□ 0.65
TRAPPC11-204ENST00000505676 JADE2Q9NQC1 790 aa19.09■□□□□ 0.65
TRAPPC11-204ENST00000505676 TYW1Q9NV66 732 aaKnown RBP19.09■□□□□ 0.65
TRAPPC11-204ENST00000505676 GPRC5DQ9NZD1 345 aa19.09■□□□□ 0.65
TRAPPC11-204ENST00000505676 PSMC6P62333 389 aa19.08■□□□□ 0.65
TRAPPC11-204ENST00000505676 TRIM59Q8IWR1 403 aa19.08■□□□□ 0.65
TRAPPC11-204ENST00000505676 SYTL5Q8TDW5 730 aaPredicted RBP19.08■□□□□ 0.65
TRAPPC11-204ENST00000505676 DYDC2Q96IM9 177 aa19.08■□□□□ 0.65
TRAPPC11-204ENST00000505676 TIPINQ9BVW5 301 aa19.08■□□□□ 0.65
TRAPPC11-204ENST00000505676 CGNQ9P2M7 1197 aaKnown RBP19.08■□□□□ 0.65
TRAPPC11-204ENST00000505676 ZNF215Q9UL58 517 aaPredicted RBP19.08■□□□□ 0.65
TRAPPC11-204ENST00000505676 FAM13AO94988 1023 aa19.08■□□□□ 0.64
TRAPPC11-204ENST00000505676 ALAS1P13196 640 aa19.08■□□□□ 0.64
TRAPPC11-204ENST00000505676 PTPRAP18433 802 aa19.08■□□□□ 0.64
TRAPPC11-204ENST00000505676 GUCY2CP25092 1073 aa19.08■□□□□ 0.64
TRAPPC11-204ENST00000505676 CYP4A11Q02928 519 aa19.08■□□□□ 0.64
TRAPPC11-204ENST00000505676 NCBP1Q09161 790 aaKnown RBP19.08■□□□□ 0.64
TRAPPC11-204ENST00000505676 SFR1Q86XK3 245 aa19.08■□□□□ 0.64
TRAPPC11-204ENST00000505676 SYN2Q92777 582 aaPredicted RBP19.08■□□□□ 0.64
TRAPPC11-204ENST00000505676 ZHX3Q9H4I2 956 aa19.08■□□□□ 0.64
TRAPPC11-204ENST00000505676 PLAGL2Q9UPG8 496 aa19.08■□□□□ 0.64
TRAPPC11-204ENST00000505676 ZNF541Q9H0D2 1346 aa19.07■□□□□ 0.64
TRAPPC11-204ENST00000505676 EIF3CLB5ME19 914 aaKnown RBP19.07■□□□□ 0.64
TRAPPC11-204ENST00000505676 ATP2A1O14983 1001 aa19.07■□□□□ 0.64
TRAPPC11-204ENST00000505676 LYPLA2O95372 231 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms