RNA–Protein interactions for RNA: ENST00000504959.5

SNX25-203, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 1,868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-203ENST00000504959 CNNM2Q9H8M5 875 aa6.54□□□□□ -1.36
SNX25-203ENST00000504959 ARHGEF4Q9NR80 690 aa6.54□□□□□ -1.36
SNX25-203ENST00000504959 FAM86C1Q9NVL1 165 aa6.54□□□□□ -1.36
SNX25-203ENST00000504959 NIP7Q9Y221 180 aaKnown RBP eCLIP6.54□□□□□ -1.36
SNX25-203ENST00000504959 RREB1Q92766 1687 aa6.54□□□□□ -1.36
SNX25-203ENST00000504959 BCORQ6W2J9 1755 aa6.54□□□□□ -1.36
SNX25-203ENST00000504959 A0A0G2JLW4 131 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 GPR25O00155 361 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 TNFRSF10CO14798 259 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 PRC1O43663 620 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 GNPTABQ3T906 1256 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 ZNF468Q5VIY5 522 aaPredicted RBP6.53□□□□□ -1.36
SNX25-203ENST00000504959 CDCP2Q5VXM1 449 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 ELMSAN1Q6PJG2 1045 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 WDR75Q8IWA0 830 aaKnown RBP6.53□□□□□ -1.36
SNX25-203ENST00000504959 AFAP1L2Q8N4X5 818 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 VGLL2Q8N8G2 317 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 SLC7A3Q8WY07 619 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 C8orf48Q96LL4 319 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 NRSN2Q9GZP1 204 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 CCDC86Q9H6F5 360 aaKnown RBP6.53□□□□□ -1.36
SNX25-203ENST00000504959 MAGEC2Q9UBF1 373 aaPredicted RBP6.53□□□□□ -1.36
SNX25-203ENST00000504959 TCEAL9Q9UHQ7 104 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 CFAP45Q9UL16 551 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 COL5A3P25940 1745 aaPredicted RBP6.53□□□□□ -1.36
SNX25-203ENST00000504959 DOCK2Q92608 1830 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 CICQ96RK0 1608 aaPredicted RBP6.53□□□□□ -1.36
SNX25-203ENST00000504959 ELP1O95163 1332 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 PTPDC1A2A3K4 754 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 C2CD2LO14523 706 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 DHX16O60231 1041 aaKnown RBP6.53□□□□□ -1.36
SNX25-203ENST00000504959 RFPL3O75679 317 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 CAMTA2O94983 1202 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 PTMAP06454 111 aaKnown RBP6.53□□□□□ -1.36
SNX25-203ENST00000504959 PDIA3P30101 505 aaKnown RBP6.53□□□□□ -1.36
SNX25-203ENST00000504959 ADD2P35612 726 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 SOX5P35711 763 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 PHKA1P46020 1223 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 SLC7A5Q01650 507 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 MAP3K12Q12852 859 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 ITPK1Q13572 414 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 FAM173BQ6P4H8 233 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 TXNDC11Q6PKC3 985 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 STRA8Q7Z7C7 330 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 NSUN7Q8NE18 718 aaKnown RBP6.53□□□□□ -1.36
SNX25-203ENST00000504959 SMARCC2Q8TAQ2 1214 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 WDR89Q96FK6 387 aaPredicted RBP6.53□□□□□ -1.36
SNX25-203ENST00000504959 AGXT2Q9BYV1 514 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 EPN3Q9H201 632 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 MCM8Q9UJA3 840 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 ZNF214Q9UL59 606 aaPredicted RBP6.53□□□□□ -1.36
SNX25-203ENST00000504959 ZKSCAN5Q9Y2L8 839 aa6.53□□□□□ -1.36
SNX25-203ENST00000504959 MRPS23Q9Y3D9 190 aaKnown RBP6.53□□□□□ -1.36
SNX25-203ENST00000504959 ZNF532Q9HCE3 1301 aa6.52□□□□□ -1.37
SNX25-203ENST00000504959 MYH13Q9UKX3 1938 aa6.52□□□□□ -1.37
SNX25-203ENST00000504959 A0A1W2PQU0 124 aa6.52□□□□□ -1.37
SNX25-203ENST00000504959 IQCA1LA6NCM1 817 aa6.52□□□□□ -1.37
SNX25-203ENST00000504959 CHURC1-FNTBB4DL54 471 aa6.52□□□□□ -1.37
SNX25-203ENST00000504959 CPLX1O14810 134 aa6.52□□□□□ -1.37
SNX25-203ENST00000504959 SIN3BO75182 1162 aa6.52□□□□□ -1.37
SNX25-203ENST00000504959 CTSBP07858 339 aa6.52□□□□□ -1.37
SNX25-203ENST00000504959 CCNFP41002 786 aa6.52□□□□□ -1.37
SNX25-203ENST00000504959 LRRC41Q15345 812 aa6.52□□□□□ -1.37
SNX25-203ENST00000504959 UBE3CQ15386 1083 aa6.52□□□□□ -1.37
SNX25-203ENST00000504959 NFE2Q16621 373 aaPredicted RBP6.52□□□□□ -1.37
SNX25-203ENST00000504959 UVSSAQ2YD98 709 aa6.52□□□□□ -1.37
SNX25-203ENST00000504959 AXDND1Q5T1B0 1012 aaPredicted RBP6.52□□□□□ -1.37
SNX25-203ENST00000504959 NAA16Q6N069 864 aaPredicted RBP6.52□□□□□ -1.37
SNX25-203ENST00000504959 SPATA5Q8NB90 893 aa6.52□□□□□ -1.37
SNX25-203ENST00000504959 BICD2Q8TD16 824 aa6.52□□□□□ -1.37
SNX25-203ENST00000504959 LEO1Q8WVC0 666 aaPredicted RBP6.52□□□□□ -1.37
SNX25-203ENST00000504959 PDCL3Q9H2J4 239 aa6.52□□□□□ -1.37
SNX25-203ENST00000504959 PIH1D3Q9NQM4 214 aaKnown RBP6.52□□□□□ -1.37
SNX25-203ENST00000504959 CCDC39Q9UFE4 941 aa6.52□□□□□ -1.37
SNX25-203ENST00000504959 SNCAIPQ9Y6H5 919 aa6.52□□□□□ -1.37
SNX25-203ENST00000504959 LRP5O75197 1615 aa6.52□□□□□ -1.37
SNX25-203ENST00000504959 ATRNO75882 1429 aa6.52□□□□□ -1.37
SNX25-203ENST00000504959 SLIT2O94813 1529 aa6.52□□□□□ -1.37
SNX25-203ENST00000504959 TAF1P21675 1872 aa6.52□□□□□ -1.37
SNX25-203ENST00000504959 KLF18A0A0U1RQI7 1052 aa6.51□□□□□ -1.37
SNX25-203ENST00000504959 GOLGA8BA8MQT2 603 aa6.51□□□□□ -1.37
SNX25-203ENST00000504959 DCDC2CA8MYV0 355 aa6.51□□□□□ -1.37
SNX25-203ENST00000504959 ALG1L2C9J202 215 aa6.51□□□□□ -1.37
SNX25-203ENST00000504959 H3BRJ5 948 aa6.51□□□□□ -1.37
SNX25-203ENST00000504959 ZNF862O60290 1169 aa6.51□□□□□ -1.37
SNX25-203ENST00000504959 NTSR2O95665 410 aa6.51□□□□□ -1.37
SNX25-203ENST00000504959 CCDC192P0DO97 292 aa6.51□□□□□ -1.37
SNX25-203ENST00000504959 PDE6AP16499 860 aa6.51□□□□□ -1.37
SNX25-203ENST00000504959 FGFR2P21802 821 aa6.51□□□□□ -1.37
SNX25-203ENST00000504959 PMLP29590 882 aa6.51□□□□□ -1.37
SNX25-203ENST00000504959 CDC27P30260 824 aa6.51□□□□□ -1.37
SNX25-203ENST00000504959 RESTQ13127 1097 aa6.51□□□□□ -1.37
SNX25-203ENST00000504959 ZC3H12BQ5HYM0 836 aaKnown RBP6.51□□□□□ -1.37
SNX25-203ENST00000504959 HDXQ7Z353 690 aa6.51□□□□□ -1.37
SNX25-203ENST00000504959 LRRTM3Q86VH5 581 aa6.51□□□□□ -1.37
SNX25-203ENST00000504959 FBXL16Q8N461 479 aa6.51□□□□□ -1.37
SNX25-203ENST00000504959 TNFRSF25Q93038 417 aa6.51□□□□□ -1.37
SNX25-203ENST00000504959 ZNF396Q96N95 335 aaPredicted RBP6.51□□□□□ -1.37
SNX25-203ENST00000504959 CDC5LQ99459 802 aaKnown RBP6.51□□□□□ -1.37
SNX25-203ENST00000504959 DHRS4Q9BTZ2 278 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms