RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ACCSQ96QU6 501 aa15.43■□□□□ 0.06
TCOF1-207ENST00000504761 LXNQ9BS40 222 aa15.43■□□□□ 0.06
TCOF1-207ENST00000504761 THAP9Q9H5L6 903 aa15.43■□□□□ 0.06
TCOF1-207ENST00000504761 C1orf112Q9NSG2 853 aa15.43■□□□□ 0.06
TCOF1-207ENST00000504761 KCNG1Q9UIX4 513 aa15.43■□□□□ 0.06
TCOF1-207ENST00000504761 PSAPP07602 524 aa15.43■□□□□ 0.06
TCOF1-207ENST00000504761 MYL7Q01449 175 aa15.43■□□□□ 0.06
TCOF1-207ENST00000504761 SWSAP1Q6NVH7 229 aa15.43■□□□□ 0.06
TCOF1-207ENST00000504761 MTFR1LQ9H019 292 aa15.43■□□□□ 0.06
TCOF1-207ENST00000504761 HAUS4Q9H6D7 363 aa15.43■□□□□ 0.06
TCOF1-207ENST00000504761 FAM205AQ6ZU69 1335 aa15.43■□□□□ 0.06
TCOF1-207ENST00000504761 VEGFAP15692 232 aaPredicted RBP15.43■□□□□ 0.06
TCOF1-207ENST00000504761 SETQ01105 290 aaPredicted RBP15.43■□□□□ 0.06
TCOF1-207ENST00000504761 LLGL1Q15334 1064 aa15.43■□□□□ 0.06
TCOF1-207ENST00000504761 STXBP2Q15833 593 aa15.43■□□□□ 0.06
TCOF1-207ENST00000504761 ADAT2Q7Z6V5 191 aaKnown RBP15.43■□□□□ 0.06
TCOF1-207ENST00000504761 GCNT4Q9P109 453 aa15.43■□□□□ 0.06
TCOF1-207ENST00000504761 LRRC63Q05C16 580 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 PPP1R7Q15435 360 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 ZBTB33Q86T24 672 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 DAAM2Q86T65 1068 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 SLC51AQ86UW1 340 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 MB21D1Q8N884 522 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 ZNF280CQ8ND82 737 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 NLRP4Q96MN2 994 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 CCSER1Q9C0I3 900 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 CCDC66A2RUB6 948 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 TMEM191BP0C7N4 346 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 INPP5BP32019 993 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 COG2Q14746 738 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 DACT2Q5SW24 774 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 SEL1L2Q5TEA6 688 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 AKT1S1Q96B36 256 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 GABBR1Q9UBS5 961 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 ABT1Q9ULW3 272 aaKnown RBP15.42■□□□□ 0.06
TCOF1-207ENST00000504761 H2AFZP0C0S5 128 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 TMOD1P28289 359 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 STK4Q13043 487 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 H2AFVQ71UI9 128 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 PDLIM2Q96JY6 352 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 MMS19Q96T76 1030 aa15.42■□□□□ 0.06
TCOF1-207ENST00000504761 WDR64B1ANS9 1081 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 GFPT2O94808 682 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 SHMT1P34896 483 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 SESTD1Q86VW0 696 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 MSANTD4Q8NCY6 345 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 SLC16A4O15374 487 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 ATG4CQ96DT6 458 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 RASAL2Q9UJF2 1139 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 PDS5AQ29RF7 1337 aaKnown RBP15.41■□□□□ 0.06
TCOF1-207ENST00000504761 SHTN1A0MZ66 631 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 KCNK3O14649 394 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 SLC37A4O43826 429 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 EIF4A3P38919 411 aaKnown RBP15.41■□□□□ 0.06
TCOF1-207ENST00000504761 ACAD9Q9H845 621 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 SPC25Q9HBM1 224 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 MTUS1Q9ULD2 1270 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 SALL1Q9NSC2 1324 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 PVALEFA0A1B0GWK0 134 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 EHHADHQ08426 723 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 NBPF12Q5TAG4 269 aaPredicted RBP15.41■□□□□ 0.06
TCOF1-207ENST00000504761 LIN9Q5TKA1 542 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 APBB1IPQ7Z5R6 666 aaPredicted RBP15.41■□□□□ 0.06
TCOF1-207ENST00000504761 AMIGO3Q86WK7 504 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 IQCDQ96DY2 449 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 MAP3K14Q99558 947 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 ADAMTS1Q9UHI8 967 aa15.41■□□□□ 0.06
TCOF1-207ENST00000504761 K7ERI5 159 aa15.4■□□□□ 0.06
TCOF1-207ENST00000504761 RGL2O15211 777 aa15.4■□□□□ 0.06
TCOF1-207ENST00000504761 KIAA0754O94854 1291 aa15.4■□□□□ 0.06
TCOF1-207ENST00000504761 QARSP47897 775 aaKnown RBP15.4■□□□□ 0.06
TCOF1-207ENST00000504761 ADPGKQ9BRR6 497 aa15.4■□□□□ 0.06
TCOF1-207ENST00000504761 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.4■□□□□ 0.06
TCOF1-207ENST00000504761 WDR46O15213 610 aaKnown RBP15.4■□□□□ 0.06
TCOF1-207ENST00000504761 ZBED6P86452 979 aa15.4■□□□□ 0.06
TCOF1-207ENST00000504761 ZNF354CQ86Y25 554 aa15.4■□□□□ 0.06
TCOF1-207ENST00000504761 TRIM58Q8NG06 486 aa15.4■□□□□ 0.06
TCOF1-207ENST00000504761 TBC1D22BQ9NU19 505 aa15.4■□□□□ 0.06
TCOF1-207ENST00000504761 FAM184BQ9ULE4 1060 aa15.4■□□□□ 0.06
TCOF1-207ENST00000504761 H0YCG3 227 aa15.4■□□□□ 0.06
TCOF1-207ENST00000504761 CAP2P40123 477 aa15.4■□□□□ 0.06
TCOF1-207ENST00000504761 RHBDL3P58872 404 aa15.4■□□□□ 0.06
TCOF1-207ENST00000504761 TFAMQ00059 246 aaKnown RBP15.4■□□□□ 0.06
TCOF1-207ENST00000504761 ANKRD40Q6AI12 368 aa15.4■□□□□ 0.06
TCOF1-207ENST00000504761 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.4■□□□□ 0.06
TCOF1-207ENST00000504761 FZD1Q9UP38 647 aa15.4■□□□□ 0.06
TCOF1-207ENST00000504761 MYMKA6NI61 221 aa15.39■□□□□ 0.05
TCOF1-207ENST00000504761 M0QZ92 97 aa15.39■□□□□ 0.05
TCOF1-207ENST00000504761 ACTN4O43707 911 aaKnown RBP15.39■□□□□ 0.05
TCOF1-207ENST00000504761 PPP2R5AQ15172 486 aa15.39■□□□□ 0.05
TCOF1-207ENST00000504761 MFAP3LO75121 409 aa15.39■□□□□ 0.05
TCOF1-207ENST00000504761 P4HBP07237 508 aaKnown RBP15.39■□□□□ 0.05
TCOF1-207ENST00000504761 SLC30A10Q6XR72 485 aa15.39■□□□□ 0.05
TCOF1-207ENST00000504761 C2orf69Q8N8R5 385 aa15.39■□□□□ 0.05
TCOF1-207ENST00000504761 LPAR1Q92633 364 aa15.39■□□□□ 0.05
TCOF1-207ENST00000504761 FAM49AQ9H0Q0 323 aaPredicted RBP15.39■□□□□ 0.05
TCOF1-207ENST00000504761 TMEM206Q9H813 350 aa15.39■□□□□ 0.05
TCOF1-207ENST00000504761 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.39■□□□□ 0.05
TCOF1-207ENST00000504761 NMT1P30419 496 aaKnown RBP15.39■□□□□ 0.05
TCOF1-207ENST00000504761 MXI1P50539 228 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms