RNA–Protein interactions for RNA: ENST00000498698.1

HMGCL-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-207ENST00000498698 ZSWIM6Q9HCJ5 1215 aa10.83□□□□□ -0.68
HMGCL-207ENST00000498698 TMEM260Q9NX78 707 aa10.83□□□□□ -0.68
HMGCL-207ENST00000498698 PKD2L1Q9P0L9 805 aa10.83□□□□□ -0.68
HMGCL-207ENST00000498698 ZNF215Q9UL58 517 aaPredicted RBP10.83□□□□□ -0.68
HMGCL-207ENST00000498698 ESYT2A0FGR8 921 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 MEIS1O00470 390 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 DLL1O00548 723 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 ADAMTS3O15072 1205 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 PRPF3O43395 683 aaKnown RBP10.82□□□□□ -0.68
HMGCL-207ENST00000498698 CAND2O75155 1236 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 LGR5O75473 907 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 ARHGEF15O94989 841 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 CA3P07451 260 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 ARP10275 920 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 DEFB103AP81534 67 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 MKRN4PQ13434 485 aaPredicted RBP10.82□□□□□ -0.68
HMGCL-207ENST00000498698 PPP2R2DQ66LE6 453 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 RUFY3Q7L099 469 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 USP38Q8NB14 1042 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 DBF4BQ8NFT6 615 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 LMBR1Q8WVP7 490 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 CRYGNQ8WXF5 182 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 PCYT2Q99447 389 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 GAS2L1Q99501 681 aaPredicted RBP10.82□□□□□ -0.68
HMGCL-207ENST00000498698 OSBPL7Q9BZF2 842 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 ZMYND12Q9H0C1 365 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 PPP4R2Q9NY27 417 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 EMSYQ7Z589 1322 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 NRCAMQ92823 1304 aa10.82□□□□□ -0.68
HMGCL-207ENST00000498698 KIF28PB7ZC32 967 aa10.81□□□□□ -0.68
HMGCL-207ENST00000498698 EFCAB14O75071 495 aa10.81□□□□□ -0.68
HMGCL-207ENST00000498698 IFNAR1P17181 557 aa10.81□□□□□ -0.68
HMGCL-207ENST00000498698 MARK3P27448 753 aa10.81□□□□□ -0.68
HMGCL-207ENST00000498698 KCNJ6P48051 423 aa10.81□□□□□ -0.68
HMGCL-207ENST00000498698 ARHGAP4P98171 946 aa10.81□□□□□ -0.68
HMGCL-207ENST00000498698 TAP1Q03518 808 aa10.81□□□□□ -0.68
HMGCL-207ENST00000498698 ITGB3BPQ13352 177 aaPredicted RBP10.81□□□□□ -0.68
HMGCL-207ENST00000498698 TOB2Q14106 344 aaPredicted RBP10.81□□□□□ -0.68
HMGCL-207ENST00000498698 IKBKEQ14164 716 aa10.81□□□□□ -0.68
HMGCL-207ENST00000498698 PLEKHG4Q58EX7 1191 aa10.81□□□□□ -0.68
HMGCL-207ENST00000498698 FAM26DQ5JW98 314 aa10.81□□□□□ -0.68
HMGCL-207ENST00000498698 JAKMIP3Q5VZ66 844 aa10.81□□□□□ -0.68
HMGCL-207ENST00000498698 ERICH6BQ5W0A0 696 aa10.81□□□□□ -0.68
HMGCL-207ENST00000498698 NIPA1Q7RTP0 329 aa10.81□□□□□ -0.68
HMGCL-207ENST00000498698 TMCO2Q7Z6W1 182 aaPredicted RBP10.81□□□□□ -0.68
HMGCL-207ENST00000498698 RPAINQ86UA6 219 aa10.81□□□□□ -0.68
HMGCL-207ENST00000498698 PHKBQ93100 1093 aa10.81□□□□□ -0.68
HMGCL-207ENST00000498698 TM6SF1Q9BZW5 370 aa10.81□□□□□ -0.68
HMGCL-207ENST00000498698 SMARCAD1Q9H4L7 1026 aa10.81□□□□□ -0.68
HMGCL-207ENST00000498698 NCOA5Q9HCD5 579 aaKnown RBP10.81□□□□□ -0.68
HMGCL-207ENST00000498698 AGO4Q9HCK5 861 aaKnown RBP10.81□□□□□ -0.68
HMGCL-207ENST00000498698 JPH1Q9HDC5 661 aaPredicted RBP10.81□□□□□ -0.68
HMGCL-207ENST00000498698 ERAP1Q9NZ08 941 aa10.81□□□□□ -0.68
HMGCL-207ENST00000498698 SLC9A2Q9UBY0 812 aa10.81□□□□□ -0.68
HMGCL-207ENST00000498698 NFASCO94856 1347 aa10.81□□□□□ -0.68
HMGCL-207ENST00000498698 CHD9Q3L8U1 2897 aa10.8□□□□□ -0.68
HMGCL-207ENST00000498698 IGLV3-22A0A075B6J6 115 aa10.8□□□□□ -0.68
HMGCL-207ENST00000498698 MBLAC1A4D2B0 266 aaPredicted RBP10.8□□□□□ -0.68
HMGCL-207ENST00000498698 FAM86B1E9PN63 330 aa10.8□□□□□ -0.68
HMGCL-207ENST00000498698 TLL1O43897 1013 aa10.8□□□□□ -0.68
HMGCL-207ENST00000498698 PPFIA3O75145 1194 aa10.8□□□□□ -0.68
HMGCL-207ENST00000498698 ATG7O95352 703 aa10.8□□□□□ -0.68
HMGCL-207ENST00000498698 GJB5O95377 273 aa10.8□□□□□ -0.68
HMGCL-207ENST00000498698 CYP3A4P08684 503 aa10.8□□□□□ -0.68
HMGCL-207ENST00000498698 CTSHP09668 335 aa10.8□□□□□ -0.68
HMGCL-207ENST00000498698 FAM86B2P0C5J1 330 aa10.8□□□□□ -0.68
HMGCL-207ENST00000498698 ACTR2P61160 394 aa10.8□□□□□ -0.68
HMGCL-207ENST00000498698 CCT2P78371 535 aaKnown RBP10.8□□□□□ -0.68
HMGCL-207ENST00000498698 PPFIA1Q13136 1202 aa10.8□□□□□ -0.68
HMGCL-207ENST00000498698 MARCH8Q5T0T0 291 aa10.8□□□□□ -0.68
HMGCL-207ENST00000498698 MCTP2Q6DN12 878 aa10.8□□□□□ -0.68
HMGCL-207ENST00000498698 RUFY4Q6ZNE9 571 aa10.8□□□□□ -0.68
HMGCL-207ENST00000498698 GLG1Q92896 1179 aa10.8□□□□□ -0.68
HMGCL-207ENST00000498698 SDF4Q9BRK5 362 aa10.8□□□□□ -0.68
HMGCL-207ENST00000498698 RNF26Q9BY78 433 aaPredicted RBP10.8□□□□□ -0.68
HMGCL-207ENST00000498698 UPF3BQ9BZI7 483 aaKnown RBP10.8□□□□□ -0.68
HMGCL-207ENST00000498698 C6orf50Q9HD87 102 aa10.8□□□□□ -0.68
HMGCL-207ENST00000498698 CYP46A1Q9Y6A2 500 aa10.8□□□□□ -0.68
HMGCL-207ENST00000498698 KIAA1217Q5T5P2 1943 aa10.8□□□□□ -0.68
HMGCL-207ENST00000498698 CUL9Q8IWT3 2517 aa10.8□□□□□ -0.68
HMGCL-207ENST00000498698 LCHNA4D1U4 455 aa10.79□□□□□ -0.68
HMGCL-207ENST00000498698 EPOPA6NHQ4 379 aa10.79□□□□□ -0.68
HMGCL-207ENST00000498698 DHX15O43143 795 aaKnown RBP10.79□□□□□ -0.68
HMGCL-207ENST00000498698 CCNE2O96020 404 aa10.79□□□□□ -0.68
HMGCL-207ENST00000498698 CHRNA1P02708 482 aa10.79□□□□□ -0.68
HMGCL-207ENST00000498698 INSRRP14616 1297 aa10.79□□□□□ -0.68
HMGCL-207ENST00000498698 POU3F3P20264 500 aaPredicted RBP10.79□□□□□ -0.68
HMGCL-207ENST00000498698 IGFBP4P22692 258 aa10.79□□□□□ -0.68
HMGCL-207ENST00000498698 GNA11P29992 359 aa10.79□□□□□ -0.68
HMGCL-207ENST00000498698 ZNF76P36508 570 aa10.79□□□□□ -0.68
HMGCL-207ENST00000498698 AKAP17AQ02040 695 aaKnown RBP10.79□□□□□ -0.68
HMGCL-207ENST00000498698 GRIK4Q16099 956 aa10.79□□□□□ -0.68
HMGCL-207ENST00000498698 TAF2Q6P1X5 1199 aa10.79□□□□□ -0.68
HMGCL-207ENST00000498698 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.79□□□□□ -0.68
HMGCL-207ENST00000498698 PLPPR4Q7Z2D5 763 aa10.79□□□□□ -0.68
HMGCL-207ENST00000498698 SPRED2Q7Z698 418 aa10.79□□□□□ -0.68
HMGCL-207ENST00000498698 PLA2G4DQ86XP0 818 aa10.79□□□□□ -0.68
HMGCL-207ENST00000498698 REXO1Q8N1G1 1221 aaKnown RBP10.79□□□□□ -0.68
HMGCL-207ENST00000498698 CCDC12Q8WUD4 166 aaPredicted RBP10.79□□□□□ -0.68
HMGCL-207ENST00000498698 SEPT8Q92599 483 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms