RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 MYH7BA7E2Y1 1941 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 SPATA31C2B4DYI2 1134 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 BTBD19C9JJ37 291 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 FOXN1O15353 648 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 CHMP2AO43633 222 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 NRDCO43847 1150 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 TBCAO75347 108 aaKnown RBP9.41□□□□□ -0.9
SF3A1-210ENST00000498259 ALDH1A1P00352 501 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 SERPINC1P01008 464 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 PRR29P0C7W0 189 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 ARP10275 920 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 IDEP14735 1019 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 GAP43P17677 238 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 ALDH5A1P51649 535 aaPredicted RBP9.41□□□□□ -0.9
SF3A1-210ENST00000498259 PSMC5P62195 406 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 PAK1Q13153 545 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 MCM6Q14566 821 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 FAM110CQ1W6H9 321 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 KMT5BQ4FZB7 885 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 FILIP1LQ4L180 1135 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 SPATA1Q5VX52 437 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 CST9Q5W186 159 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 ISM2Q6H9L7 571 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 MIS18BP1Q6P0N0 1132 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 FOXR2Q6PJQ5 311 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 C11orf57Q6ZUT1 292 aaPredicted RBP9.41□□□□□ -0.9
SF3A1-210ENST00000498259 ZNF467Q7Z7K2 595 aaPredicted RBP9.41□□□□□ -0.9
SF3A1-210ENST00000498259 DRC7Q8IY82 874 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 EXOC8Q8IYI6 725 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 GRAMD1CQ8IYS0 662 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 MSL3Q8N5Y2 521 aaKnown RBP9.41□□□□□ -0.9
SF3A1-210ENST00000498259 DDX12PQ92771 950 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 ERCC4Q92889 916 aaPredicted RBP9.41□□□□□ -0.9
SF3A1-210ENST00000498259 PNMA5Q96PV4 448 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 TSG101Q99816 390 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 BLZF1Q9H2G9 400 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 JPH1Q9HDC5 661 aaPredicted RBP9.41□□□□□ -0.9
SF3A1-210ENST00000498259 BLOC1S4Q9NUP1 217 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 MAGEC2Q9UBF1 373 aaPredicted RBP9.41□□□□□ -0.9
SF3A1-210ENST00000498259 SEL1LQ9UBV2 794 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 DIS3Q9Y2L1 958 aaKnown RBP9.41□□□□□ -0.9
SF3A1-210ENST00000498259 COL4A3BPQ9Y5P4 624 aa9.41□□□□□ -0.9
SF3A1-210ENST00000498259 SYNRGQ9UMZ2 1314 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 POTEB3A0JP26 581 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 ARHGEF35A5YM69 484 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 TMEM88BA6NKF7 163 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 MED24O75448 989 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 SLITRK3O94933 977 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 LYPLA2O95372 231 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 ADCY5O95622 1261 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 TAL1P17542 331 aaPredicted RBP9.4□□□□□ -0.9
SF3A1-210ENST00000498259 SCP2P22307 547 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 GJA5P36382 358 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 FSTL1Q12841 308 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 POTEBQ6S5H4 581 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 SAPCD2Q86UD0 394 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 GPBP1Q86WP2 473 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 DHX40Q8IX18 779 aaKnown RBP9.4□□□□□ -0.9
SF3A1-210ENST00000498259 C4orf19Q8IY42 314 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 ANKRD13CQ8N6S4 541 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 FAM133AQ8N9E0 248 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 BRI3BPQ8WY22 251 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 STAMQ92783 540 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 MRFAP1L1Q96HT8 127 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 UNC45AQ9H3U1 944 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 ZFYVE28Q9HCC9 887 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 ANKEF1Q9NU02 776 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 PANK4Q9NVE7 773 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 SLC9A2Q9UBY0 812 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 DBR1Q9UK59 544 aaKnown RBP9.4□□□□□ -0.9
SF3A1-210ENST00000498259 ODF2LQ9ULJ1 636 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 ABT1Q9ULW3 272 aaKnown RBP9.4□□□□□ -0.9
SF3A1-210ENST00000498259 PPME1Q9Y570 386 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 OTOFQ9HC10 1997 aa9.4□□□□□ -0.9
SF3A1-210ENST00000498259 RBBP6Q7Z6E9 1792 aaKnown RBP9.4□□□□□ -0.91
SF3A1-210ENST00000498259 POTEFA5A3E0 1075 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 DHX15O43143 795 aaKnown RBP9.39□□□□□ -0.91
SF3A1-210ENST00000498259 CNMDO75829 334 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 TOMM70O94826 608 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 SPATA31C1P0DKV0 1188 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 CYP2C8P10632 490 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 EDNRBP24530 442 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 CDC25BP30305 580 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 SLC12A3P55017 1021 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 CYP4A11Q02928 519 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 LRRC63Q05C16 580 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 IRF5Q13568 498 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 ALCAMQ13740 583 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 HSP90AA2PQ14568 343 aaPredicted RBP9.39□□□□□ -0.91
SF3A1-210ENST00000498259 HERC4Q5GLZ8 1057 aaPredicted RBP9.39□□□□□ -0.91
SF3A1-210ENST00000498259 FAM160B1Q5W0V3 765 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 KLHL10Q6JEL2 608 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 POTEGQ6S5H5 508 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 POTEEQ6S8J3 1075 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 B3GNT9Q6UX72 402 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 DPP9Q86TI2 863 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 ADSSL1Q8N142 457 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 GUF1Q8N442 669 aaKnown RBP9.39□□□□□ -0.91
SF3A1-210ENST00000498259 IL31RAQ8NI17 732 aa9.39□□□□□ -0.91
SF3A1-210ENST00000498259 DYDC2Q96IM9 177 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms