RNA–Protein interactions for RNA: ENST00000496804.5

MACF1-224, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 5,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-224ENST00000496804 EHD2Q9NZN4 543 aa9.53□□□□□ -0.88
MACF1-224ENST00000496804 TRPM2O94759 1503 aa9.53□□□□□ -0.88
MACF1-224ENST00000496804 HNRNPCL1O60812 293 aaKnown RBP9.52□□□□□ -0.88
MACF1-224ENST00000496804 FAM13AO94988 1023 aa9.52□□□□□ -0.88
MACF1-224ENST00000496804 CTDNEP1O95476 244 aa9.52□□□□□ -0.88
MACF1-224ENST00000496804 ALKBH5Q6P6C2 394 aaKnown RBP9.52□□□□□ -0.88
MACF1-224ENST00000496804 TRIM74Q86UV6 250 aa9.52□□□□□ -0.88
MACF1-224ENST00000496804 TRIM73Q86UV7 250 aa9.52□□□□□ -0.88
MACF1-224ENST00000496804 TRIM55Q9BYV6 548 aa9.52□□□□□ -0.88
MACF1-224ENST00000496804 TAF6LQ9Y6J9 622 aa9.52□□□□□ -0.88
MACF1-224ENST00000496804 MRC2Q9UBG0 1479 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 RASA4BC9J798 803 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 NDC80O14777 642 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 RNMTO43148 476 aaKnown RBP9.52□□□□□ -0.89
MACF1-224ENST00000496804 RASA4O43374 803 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 EXOSC10Q01780 885 aaKnown RBP9.52□□□□□ -0.89
MACF1-224ENST00000496804 ARHGAP44Q17R89 818 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 TMCO4Q5TGY1 634 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 MAEAQ7L5Y9 396 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 RASSF3Q86WH2 238 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 NLRP7Q8WX94 980 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 FAM129AQ9BZQ8 928 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 ANLNQ9NQW6 1124 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 AGPAT5Q9NUQ2 364 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 EXOC1LA0A1B0GW35 172 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 WDR91A4D1P6 747 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 SRRM3A6NNA2 597 aaPredicted RBP9.52□□□□□ -0.89
MACF1-224ENST00000496804 TRAPPC3O43617 180 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 ZNF189O75820 626 aaPredicted RBP9.52□□□□□ -0.89
MACF1-224ENST00000496804 PRPF6O94906 941 aaKnown RBP9.52□□□□□ -0.89
MACF1-224ENST00000496804 SLC1A4P43007 532 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 EXOC3L4Q17RC7 722 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 C16orf87Q6PH81 154 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 KRT25Q7Z3Z0 450 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 DDX42Q86XP3 938 aaKnown RBP eCLIP9.52□□□□□ -0.89
MACF1-224ENST00000496804 CXorf38Q8TB03 319 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 CNKSR2Q8WXI2 1034 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 TEKT1Q969V4 418 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 CCDC68Q9H2F9 335 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 ANAPC5Q9UJX4 755 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 ARHGEF5Q12774 1597 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 KLHL33A6NCF5 533 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 PRLRP16471 622 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 ACCSLQ4AC99 568 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 RBM26Q5T8P6 1007 aaKnown RBP9.52□□□□□ -0.89
MACF1-224ENST00000496804 CWF19L1Q69YN2 538 aaKnown RBP9.52□□□□□ -0.89
MACF1-224ENST00000496804 TSEN2Q8NCE0 465 aaKnown RBP9.52□□□□□ -0.89
MACF1-224ENST00000496804 OSBP2Q969R2 916 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 CLMNQ96JQ2 1002 aa9.52□□□□□ -0.89
MACF1-224ENST00000496804 TEX13AQ9BXU3 409 aaPredicted RBP9.52□□□□□ -0.89
MACF1-224ENST00000496804 FBXO2Q9UK22 296 aaPredicted RBP9.52□□□□□ -0.89
MACF1-224ENST00000496804 CFAP69A5D8W1 941 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 BCRP11274 1271 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 MX2P20592 715 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 LMNB1P20700 586 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 MAN1A1P33908 653 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 CACNA2D1P54289 1103 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 USPL1Q5W0Q7 1092 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 PALM2Q8IXS6 379 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 HDAC7Q8WUI4 952 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 RMDN2Q96LZ7 410 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 RIC8AQ9NPQ8 531 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 AATKQ6ZMQ8 1374 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 STARD3NLO95772 234 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 RFC5P40937 340 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 FKBP3Q00688 224 aaKnown RBP9.51□□□□□ -0.89
MACF1-224ENST00000496804 ADAM9Q13443 819 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 FBXO31Q5XUX0 539 aaPredicted RBP9.51□□□□□ -0.89
MACF1-224ENST00000496804 KRT80Q6KB66 452 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 ZNF483Q8TF39 744 aaPredicted RBP9.51□□□□□ -0.89
MACF1-224ENST00000496804 USP6NLQ92738 828 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 UBXN6Q9BZV1 441 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 TXNDC16Q9P2K2 825 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 DCTN4Q9UJW0 460 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 DIS3Q9Y2L1 958 aaKnown RBP9.51□□□□□ -0.89
MACF1-224ENST00000496804 LIN7AO14910 233 aaPredicted RBP9.51□□□□□ -0.89
MACF1-224ENST00000496804 RAPGEF3O95398 923 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 ALDH5A1P51649 535 aaPredicted RBP9.51□□□□□ -0.89
MACF1-224ENST00000496804 ANKRD20A4Q4UJ75 823 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 RFX8Q6ZV50 586 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 ELOA2Q8IYF1 753 aaPredicted RBP9.51□□□□□ -0.89
MACF1-224ENST00000496804 ANKRD2Q9GZV1 360 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 DNAJC17Q9NVM6 304 aaKnown RBP9.51□□□□□ -0.89
MACF1-224ENST00000496804 FAM187AA6NFU0 413 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 ASAP2O43150 1006 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 ZCCHC18P0CG32 403 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 FDPSP14324 419 aaKnown RBP9.51□□□□□ -0.89
MACF1-224ENST00000496804 ZNF18P17022 549 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 TECP42680 631 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 Q4G0T1 1027 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 ZCWPW2Q504Y3 356 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 DAB2IPQ5VWQ8 1189 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 IFNL3Q8IZI9 196 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 COL4A3BPQ9Y5P4 624 aa9.51□□□□□ -0.89
MACF1-224ENST00000496804 TTI1O43156 1089 aa9.5□□□□□ -0.89
MACF1-224ENST00000496804 PDE5AO76074 875 aa9.5□□□□□ -0.89
MACF1-224ENST00000496804 OR52Z1P0C646 297 aa9.5□□□□□ -0.89
MACF1-224ENST00000496804 SCG2P13521 617 aa9.5□□□□□ -0.89
MACF1-224ENST00000496804 SFSWAPQ12872 951 aaKnown RBP9.5□□□□□ -0.89
MACF1-224ENST00000496804 MESDQ14696 234 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms