RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 ITGB5P18084 799 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 MUTP22033 750 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 MTIF2P46199 727 aaKnown RBP11.83□□□□□ -0.52
CLCN6-208ENST00000494028 HMGCS2P54868 508 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 ERVK-24P63145 666 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 UBXN1Q04323 297 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 GIT2Q14161 759 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 MTF1Q14872 753 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 PCNX4Q63HM2 1172 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 RAD9BQ6WBX8 426 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 KRT26Q7Z3Y9 468 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 SFR1Q86XK3 245 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 KCTD17Q8N5Z5 321 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 SAMD3Q8N6K7 520 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 NEK9Q8TD19 979 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 TSG101Q99816 390 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 ZNF577Q9BSK1 485 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 NAA15Q9BXJ9 866 aaKnown RBP11.83□□□□□ -0.52
CLCN6-208ENST00000494028 HOMER2Q9NSB8 354 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 BMP2KQ9NSY1 1161 aaPredicted RBP11.83□□□□□ -0.52
CLCN6-208ENST00000494028 RNF146Q9NTX7 359 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 RGL1Q9NZL6 768 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 PPP2R2CQ9Y2T4 447 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 SNCAIPQ9Y6H5 919 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 SIP14410 1827 aa11.83□□□□□ -0.52
CLCN6-208ENST00000494028 RSPH10B2B2RC85 870 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 RNF225M0QZC1 329 aaPredicted RBP11.82□□□□□ -0.52
CLCN6-208ENST00000494028 ZBED4O75132 1171 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 KRT18P05783 430 aaKnown RBP11.82□□□□□ -0.52
CLCN6-208ENST00000494028 TPM1P09493 284 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 RSPH10BP0C881 870 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 PRKCSHP14314 528 aaPredicted RBP11.82□□□□□ -0.52
CLCN6-208ENST00000494028 DSG3P32926 999 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 DNM2P50570 870 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 CASP5P51878 434 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 RPS6P62753 249 aaKnown RBP11.82□□□□□ -0.52
CLCN6-208ENST00000494028 RAD51AP2Q09MP3 1159 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 CTTNQ14247 550 aaKnown RBP11.82□□□□□ -0.52
CLCN6-208ENST00000494028 MAN2A1Q16706 1144 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 EPM2AIP1Q7L775 607 aaPredicted RBP11.82□□□□□ -0.52
CLCN6-208ENST00000494028 SCFD1Q8WVM8 642 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 EEF2KMTQ96G04 330 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 ERGIC2Q96RQ1 377 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 RIT2Q99578 217 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 HSD17B14Q9BPX1 270 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 DESI2Q9BSY9 194 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 BHMT2Q9H2M3 363 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 KCTD10Q9H3F6 313 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 ADARB2Q9NS39 739 aaKnown RBP11.82□□□□□ -0.52
CLCN6-208ENST00000494028 MAP3K20Q9NYL2 800 aaKnown RBP11.82□□□□□ -0.52
CLCN6-208ENST00000494028 TBC1D7Q9P0N9 293 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 RNF181Q9P0P0 153 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.82□□□□□ -0.52
CLCN6-208ENST00000494028 WRAP73Q9P2S5 460 aaPredicted RBP11.82□□□□□ -0.52
CLCN6-208ENST00000494028 ZNF214Q9UL59 606 aaPredicted RBP11.82□□□□□ -0.52
CLCN6-208ENST00000494028 DNM3Q9UQ16 869 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 PHLPP2Q6ZVD8 1323 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 MYPNQ86TC9 1320 aa11.82□□□□□ -0.52
CLCN6-208ENST00000494028 C19orf81C9J6K1 198 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 ADM5C9JUS6 153 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 IPO5O00410 1097 aaKnown RBP11.81□□□□□ -0.52
CLCN6-208ENST00000494028 FANCGO15287 622 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 ZSCAN12O43309 604 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 TBCAO75347 108 aaKnown RBP11.81□□□□□ -0.52
CLCN6-208ENST00000494028 DDNO94850 711 aaPredicted RBP11.81□□□□□ -0.52
CLCN6-208ENST00000494028 FGFR1OPO95684 399 aaKnown RBP11.81□□□□□ -0.52
CLCN6-208ENST00000494028 EIF2AK2P19525 551 aaKnown RBP11.81□□□□□ -0.52
CLCN6-208ENST00000494028 KLK7P49862 253 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 OAZ1P54368 228 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 MRPS9P82933 396 aaKnown RBP11.81□□□□□ -0.52
CLCN6-208ENST00000494028 ITGB3BPQ13352 177 aaPredicted RBP11.81□□□□□ -0.52
CLCN6-208ENST00000494028 PGM5Q15124 567 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 EPHA7Q15375 998 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 SYCP1Q15431 976 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 BMT2Q1RMZ1 405 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 TKFCQ3LXA3 575 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 SH3D19Q5HYK7 790 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 NELFCDQ8IXH7 590 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 CEP63Q96MT8 703 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 TAAR1Q96RJ0 339 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 PDCD2LQ9BRP1 358 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 LXNQ9BS40 222 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 NOC4LQ9BVI4 516 aaKnown RBP11.81□□□□□ -0.52
CLCN6-208ENST00000494028 MRPL44Q9H9J2 332 aaKnown RBP11.81□□□□□ -0.52
CLCN6-208ENST00000494028 AGO4Q9HCK5 861 aaKnown RBP11.81□□□□□ -0.52
CLCN6-208ENST00000494028 JADE2Q9NQC1 790 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 PXMP2Q9NR77 195 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 ADAMTS5Q9UNA0 930 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 SIK3Q9Y2K2 1263 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 CTDP1Q9Y5B0 961 aaPredicted RBP11.81□□□□□ -0.52
CLCN6-208ENST00000494028 ZHX2Q9Y6X8 837 aa11.81□□□□□ -0.52
CLCN6-208ENST00000494028 TTC26A0AVF1 554 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 GOLGA6L9A6NEM1 432 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 RASSF10A6NK89 507 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 SPDYE16A6NNV3 312 aaPredicted RBP11.8□□□□□ -0.52
CLCN6-208ENST00000494028 DDX39AO00148 427 aaKnown RBP11.8□□□□□ -0.52
CLCN6-208ENST00000494028 PES1O00541 588 aaKnown RBP11.8□□□□□ -0.52
CLCN6-208ENST00000494028 DYNC1I1O14576 645 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 MYBP10242 640 aa11.8□□□□□ -0.52
CLCN6-208ENST00000494028 KRT9P35527 623 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms