RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 SF3A1Q15459 793 aaKnown RBP6.91□□□□□ -1.3
CPSF7-213ENST00000494016 PKN1Q16512 942 aa6.91□□□□□ -1.3
CPSF7-213ENST00000494016 C12orf60Q5U649 245 aa6.91□□□□□ -1.3
CPSF7-213ENST00000494016 ZSCAN30Q86W11 494 aa6.91□□□□□ -1.3
CPSF7-213ENST00000494016 FBXO11Q86XK2 927 aa6.91□□□□□ -1.3
CPSF7-213ENST00000494016 CCNJLQ8IV13 435 aa6.91□□□□□ -1.3
CPSF7-213ENST00000494016 FSIP1Q8NA03 581 aa6.91□□□□□ -1.3
CPSF7-213ENST00000494016 SH3RF3Q8TEJ3 882 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-213ENST00000494016 ANKS1AQ92625 1134 aa6.91□□□□□ -1.3
CPSF7-213ENST00000494016 RPGRQ92834 1020 aaKnown RBP6.91□□□□□ -1.3
CPSF7-213ENST00000494016 TCF12Q99081 682 aa6.91□□□□□ -1.3
CPSF7-213ENST00000494016 CBX8Q9HC52 389 aa6.91□□□□□ -1.3
CPSF7-213ENST00000494016 SRA1Q9HD15 236 aaKnown RBP6.91□□□□□ -1.3
CPSF7-213ENST00000494016 CCDC39Q9UFE4 941 aa6.91□□□□□ -1.3
CPSF7-213ENST00000494016 NOL7Q9UMY1 257 aaKnown RBP6.91□□□□□ -1.3
CPSF7-213ENST00000494016 TNKSO95271 1327 aa6.91□□□□□ -1.3
CPSF7-213ENST00000494016 COL11A2P13942 1736 aaPredicted RBP6.9□□□□□ -1.3
CPSF7-213ENST00000494016 ANKRD31Q8N7Z5 1873 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 MYH6P13533 1939 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 A0A1B0GVL5 298 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 ANKRD33BA6NCL7 494 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 BTBD18B2RXH4 712 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 PRPF3O43395 683 aaKnown RBP6.9□□□□□ -1.3
CPSF7-213ENST00000494016 PPP6R2O75170 966 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 DEAF1O75398 565 aaPredicted RBP6.9□□□□□ -1.3
CPSF7-213ENST00000494016 MMP1P03956 469 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 LDHCP07864 332 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 ELNP15502 786 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 EPHA1P21709 976 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 ME1P48163 572 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 PRELPP51888 382 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 NDUFA8P51970 172 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 GSTO1P78417 241 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 TROAPQ12815 778 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 COL19A1Q14993 1142 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 IQCB1Q15051 598 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 PPP2R5BQ15173 497 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 ANO6Q4KMQ2 910 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 FAM47AQ5JRC9 791 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 RCSD1Q6JBY9 416 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 SASS6Q6UVJ0 657 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 ZNF804AQ7Z570 1209 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 MAP4K3Q8IVH8 894 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 SP8Q8IXZ3 490 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 FLAD1Q8NFF5 587 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 TBC1D16Q8TBP0 767 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 KCNG4Q8TDN1 519 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 EPS8L3Q8TE67 593 aaKnown RBP6.9□□□□□ -1.3
CPSF7-213ENST00000494016 NUP133Q8WUM0 1156 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 BSNDQ8WZ55 320 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 MRPS27Q92552 414 aaKnown RBP6.9□□□□□ -1.3
CPSF7-213ENST00000494016 WASF1Q92558 559 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 DRC1Q96MC2 740 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 UBAC1Q9BSL1 405 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 USP25Q9UHP3 1055 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 SOX13Q9UN79 622 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 KCNJ14Q9UNX9 436 aa6.9□□□□□ -1.3
CPSF7-213ENST00000494016 LAMB1P07942 1786 aa6.9□□□□□ -1.31
CPSF7-213ENST00000494016 ARFGEF1Q9Y6D6 1849 aa6.9□□□□□ -1.31
CPSF7-213ENST00000494016 CDK5RAP2Q96SN8 1893 aa6.9□□□□□ -1.31
CPSF7-213ENST00000494016 PCNTO95613 3336 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 GPR75-ASB3A0A0A6YYF3 556 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 CCDC196A0A1B0GTZ2 297 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 ZNF500O60304 480 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-213ENST00000494016 NMT2O60551 498 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 UFL1O94874 794 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 ZNF202O95125 648 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 PLEKHA8P1O95397 391 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 DEXIO95424 95 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 P4HBP07237 508 aaKnown RBP6.89□□□□□ -1.31
CPSF7-213ENST00000494016 MMP10P09238 476 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 MARCKSP29966 332 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-213ENST00000494016 MAPK8P45983 427 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 TRIM29Q14134 588 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 SETDB1Q15047 1291 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 IFIT1BQ5T764 474 aaKnown RBP6.89□□□□□ -1.31
CPSF7-213ENST00000494016 SHC4Q6S5L8 630 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 CCDC73Q6ZRK6 1079 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 CATIPQ7Z7H3 387 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 LUZP1Q86V48 1076 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 DZIP1Q86YF9 867 aaKnown RBP6.89□□□□□ -1.31
CPSF7-213ENST00000494016 NOSTRINQ8IVI9 506 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 NLGN1Q8N2Q7 840 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 SRBD1Q8N5C6 995 aaKnown RBP6.89□□□□□ -1.31
CPSF7-213ENST00000494016 FBF1Q8TES7 1133 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 DYNLL2Q96FJ2 89 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 RTFDC1Q9BY42 306 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-213ENST00000494016 RNF26Q9BY78 433 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-213ENST00000494016 FOXP1Q9H334 677 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-213ENST00000494016 LIN7BQ9HAP6 207 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 IL17RBQ9NRM6 502 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 ARPP21Q9UBL0 812 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-213ENST00000494016 HPSEQ9Y251 543 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 FAM205AQ6ZU69 1335 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 LTBP1Q14766 1721 aa6.89□□□□□ -1.31
CPSF7-213ENST00000494016 LRRC37AA6NMS7 1700 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 MROH7-TTC4A0A0A0MT08 1334 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 A0A087WWV3 80 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 hCG_1642624A0A1W2PR95 340 aa6.88□□□□□ -1.31
CPSF7-213ENST00000494016 H3BRJ5 948 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms