RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 SLC12A3P55017 1021 aa15.25■□□□□ 0.03
VCP-207ENST00000493886 SMC1AQ14683 1233 aaKnown RBP15.25■□□□□ 0.03
VCP-207ENST00000493886 NBPF20Q3BBV1 942 aa15.25■□□□□ 0.03
VCP-207ENST00000493886 FOXR2Q6PJQ5 311 aa15.25■□□□□ 0.03
VCP-207ENST00000493886 FAM160B2Q86V87 743 aa15.25■□□□□ 0.03
VCP-207ENST00000493886 CHP1Q99653 195 aa15.25■□□□□ 0.03
VCP-207ENST00000493886 TTYH3Q9C0H2 523 aa15.25■□□□□ 0.03
VCP-207ENST00000493886 CEP83Q9Y592 693 aa15.25■□□□□ 0.03
VCP-207ENST00000493886 NPHP3-ACAD11A0A0J9YXS1 232 aa15.24■□□□□ 0.03
VCP-207ENST00000493886 GCOM1H8Y6P7 765 aaPredicted RBP15.24■□□□□ 0.03
VCP-207ENST00000493886 ASNSP08243 561 aa15.24■□□□□ 0.03
VCP-207ENST00000493886 POLR2MP0CAP2 368 aa15.24■□□□□ 0.03
VCP-207ENST00000493886 TRIM21P19474 475 aaKnown RBP15.24■□□□□ 0.03
VCP-207ENST00000493886 KLK7P49862 253 aa15.24■□□□□ 0.03
VCP-207ENST00000493886 FKBP15Q5T1M5 1219 aa15.24■□□□□ 0.03
VCP-207ENST00000493886 LRRC55Q6ZSA7 311 aa15.24■□□□□ 0.03
VCP-207ENST00000493886 CCDC84Q86UT8 332 aaPredicted RBP15.24■□□□□ 0.03
VCP-207ENST00000493886 RETREG2Q8NC44 543 aa15.24■□□□□ 0.03
VCP-207ENST00000493886 ERGIC2Q96RQ1 377 aa15.24■□□□□ 0.03
VCP-207ENST00000493886 STK24Q9Y6E0 443 aa15.24■□□□□ 0.03
VCP-207ENST00000493886 RASSF10A6NK89 507 aa15.24■□□□□ 0.03
VCP-207ENST00000493886 SPATA31C1P0DKV0 1188 aa15.24■□□□□ 0.03
VCP-207ENST00000493886 CACNB1Q02641 598 aaPredicted RBP15.24■□□□□ 0.03
VCP-207ENST00000493886 TSR1Q2NL82 804 aaKnown RBP15.24■□□□□ 0.03
VCP-207ENST00000493886 RABGGTAQ92696 567 aa15.24■□□□□ 0.03
VCP-207ENST00000493886 PNKPQ96T60 521 aa15.24■□□□□ 0.03
VCP-207ENST00000493886 TBC1D7Q9P0N9 293 aa15.24■□□□□ 0.03
VCP-207ENST00000493886 VAV3Q9UKW4 847 aa15.24■□□□□ 0.03
VCP-207ENST00000493886 SCAF8Q9UPN6 1271 aaKnown RBP15.24■□□□□ 0.03
VCP-207ENST00000493886 MRPL11Q9Y3B7 192 aaKnown RBP15.24■□□□□ 0.03
VCP-207ENST00000493886 CCDC66A2RUB6 948 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 GTF2A1P52655 376 aaPredicted RBP15.23■□□□□ 0.03
VCP-207ENST00000493886 LONRF2Q1L5Z9 754 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 VWA3BQ502W6 1294 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 PCMTD1Q96MG8 357 aaPredicted RBP15.23■□□□□ 0.03
VCP-207ENST00000493886 FGFBP2Q9BYJ0 223 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 AGPAT5Q9NUQ2 364 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 FBXO28Q9NVF7 368 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 FEM1BQ9UK73 627 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 PCDHA2Q9Y5H9 948 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 ABCB11O95342 1321 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 IGLV3-22A0A075B6J6 115 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 MEIS1O00470 390 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 KRT18P05783 430 aaKnown RBP15.23■□□□□ 0.03
VCP-207ENST00000493886 PSMC6P62333 389 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 RAD51AP2Q09MP3 1159 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 RASA3Q14644 834 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 MAN2A1Q16706 1144 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 ZCWPW2Q504Y3 356 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 ARSHQ5FYA8 562 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 HERC4Q5GLZ8 1057 aaPredicted RBP15.23■□□□□ 0.03
VCP-207ENST00000493886 SRGAP1Q7Z6B7 1085 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 GPIHBP1Q8IV16 184 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 DNM3Q9UQ16 869 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 PITPNM2Q9BZ72 1349 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 WDR59Q6PJI9 974 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 MYCBPQ99417 103 aaPredicted RBP15.23■□□□□ 0.03
VCP-207ENST00000493886 FUT8Q9BYC5 575 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 NDST4Q9H3R1 872 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 ANKZF1Q9H8Y5 726 aa15.23■□□□□ 0.03
VCP-207ENST00000493886 EPN1Q9Y6I3 576 aaPredicted RBP15.23■□□□□ 0.03
VCP-207ENST00000493886 FER1L6Q2WGJ9 1857 aa15.22■□□□□ 0.03
VCP-207ENST00000493886 FRMD3A2A2Y4 597 aa15.22■□□□□ 0.03
VCP-207ENST00000493886 CTAGE9A4FU28 777 aa15.22■□□□□ 0.03
VCP-207ENST00000493886 TULP2O00295 520 aa15.22■□□□□ 0.03
VCP-207ENST00000493886 CYP2C19P33261 490 aa15.22■□□□□ 0.03
VCP-207ENST00000493886 PABPC4Q13310 644 aaKnown RBP eCLIP15.22■□□□□ 0.036e-8■■□□□ 12.6
VCP-207ENST00000493886 TNIP1Q15025 636 aa15.22■□□□□ 0.03
VCP-207ENST00000493886 WDR18Q9BV38 432 aa15.22■□□□□ 0.03
VCP-207ENST00000493886 CDC23Q9UJX2 597 aa15.22■□□□□ 0.03
VCP-207ENST00000493886 GUCA1BQ9UMX6 200 aa15.22■□□□□ 0.03
VCP-207ENST00000493886 H3BQF6 201 aa15.22■□□□□ 0.03
VCP-207ENST00000493886 ENC1O14682 589 aa15.22■□□□□ 0.03
VCP-207ENST00000493886 NDUFA10O95299 355 aa15.22■□□□□ 0.03
VCP-207ENST00000493886 ZBED6P86452 979 aa15.22■□□□□ 0.03
VCP-207ENST00000493886 FKBP3Q00688 224 aaKnown RBP15.22■□□□□ 0.03
VCP-207ENST00000493886 FIGNQ5HY92 759 aa15.22■□□□□ 0.03
VCP-207ENST00000493886 LDHDQ86WU2 507 aa15.22■□□□□ 0.03
VCP-207ENST00000493886 SYT2Q8N9I0 419 aaPredicted RBP15.22■□□□□ 0.03
VCP-207ENST00000493886 ZNF341Q9BYN7 854 aa15.22■□□□□ 0.03
VCP-207ENST00000493886 PHF20L1A8MW92 1017 aa15.21■□□□□ 0.03
VCP-207ENST00000493886 NFKBIEO00221 500 aa15.21■□□□□ 0.03
VCP-207ENST00000493886 SATB1Q01826 763 aa15.21■□□□□ 0.03
VCP-207ENST00000493886 MAP2K1Q02750 393 aaPredicted RBP15.21■□□□□ 0.03
VCP-207ENST00000493886 CYP4A11Q02928 519 aa15.21■□□□□ 0.03
VCP-207ENST00000493886 MEA1Q16626 185 aa15.21■□□□□ 0.03
VCP-207ENST00000493886 DNAJC21Q5F1R6 531 aaKnown RBP15.21■□□□□ 0.03
VCP-207ENST00000493886 POLR3CQ9BUI4 534 aaPredicted RBP15.21■□□□□ 0.03
VCP-207ENST00000493886 ZHX3Q9H4I2 956 aa15.21■□□□□ 0.03
VCP-207ENST00000493886 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.21■□□□□ 0.03
VCP-207ENST00000493886 EML1O00423 815 aa15.21■□□□□ 0.03
VCP-207ENST00000493886 TRAF5O00463 557 aa15.21■□□□□ 0.03
VCP-207ENST00000493886 EGFRP00533 1210 aa15.21■□□□□ 0.03
VCP-207ENST00000493886 POLD1P28340 1107 aa15.21■□□□□ 0.03
VCP-207ENST00000493886 ZNF280AP59817 542 aaPredicted RBP15.21■□□□□ 0.03
VCP-207ENST00000493886 NELFCDQ8IXH7 590 aa15.21■□□□□ 0.03
VCP-207ENST00000493886 EIF2AK1Q9BQI3 630 aaKnown RBP15.21■□□□□ 0.03
VCP-207ENST00000493886 EHMT1Q9H9B1 1298 aa15.21■□□□□ 0.03
VCP-207ENST00000493886 A0A1W2PQJ5 194 aa15.2■□□□□ 0.02
VCP-207ENST00000493886 UBXN2AP68543 259 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms