RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 SIK3Q9Y2K2 1263 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 FRMPD4Q14CM0 1322 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 HNRNPH3P31942 346 aaKnown RBP11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 PSMC6P62333 389 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 TUBB2AQ13885 445 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 HSP90AA2PQ14568 343 aaPredicted RBP11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 EPHA7Q15375 998 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 B3GNT9Q6UX72 402 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 EPM2AIP1Q7L775 607 aaPredicted RBP11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 SCYL3Q8IZE3 742 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 GLIS3Q8NEA6 775 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 CLEC4DQ8WXI8 215 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 REEP2Q9BRK0 252 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 ZNF577Q9BSK1 485 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 TUBB2BQ9BVA1 445 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 OLFML3Q9NRN5 406 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 PPP1R1BQ9UD71 204 aaPredicted RBP11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 FAM184BQ9ULE4 1060 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 TRAF3IP3Q9Y228 551 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 PPP2R3BQ9Y5P8 575 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 EPN1Q9Y6I3 576 aaPredicted RBP11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 LOXHD1Q8IVV2 1947 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 RASSF10A6NK89 507 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 TRAF5O00463 557 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 TBCAO75347 108 aaKnown RBP11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 NDUFA10O95299 355 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 RASSF7Q02833 373 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 ARHGAP29Q52LW3 1261 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 SAMD7Q7Z3H4 446 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 PCMTD1Q96MG8 357 aaPredicted RBP11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 AGBL1Q96MI9 1066 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 UIMC1Q96RL1 719 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 GJA3Q9Y6H8 435 aa11.95□□□□□ -0.5
PHACTR4-204ENST00000493669 NPHP3-ACAD11A0A0J9YXS1 232 aa11.94□□□□□ -0.5
PHACTR4-204ENST00000493669 CYLC1P35663 651 aaPredicted RBP11.94□□□□□ -0.5
PHACTR4-204ENST00000493669 KRT83P78385 493 aa11.94□□□□□ -0.5
PHACTR4-204ENST00000493669 TBC1D10BQ4KMP7 808 aaPredicted RBP11.94□□□□□ -0.5
PHACTR4-204ENST00000493669 NACC1Q96RE7 527 aa11.94□□□□□ -0.5
PHACTR4-204ENST00000493669 BHMT2Q9H2M3 363 aa11.94□□□□□ -0.5
PHACTR4-204ENST00000493669 ZBED4O75132 1171 aa11.94□□□□□ -0.5
PHACTR4-204ENST00000493669 SLITRK3O94933 977 aa11.94□□□□□ -0.5
PHACTR4-204ENST00000493669 VCAM1P19320 739 aa11.94□□□□□ -0.5
PHACTR4-204ENST00000493669 CYP4A11Q02928 519 aa11.94□□□□□ -0.5
PHACTR4-204ENST00000493669 PPP2R3AQ06190 1150 aa11.94□□□□□ -0.5
PHACTR4-204ENST00000493669 CCDC40Q4G0X9 1142 aa11.94□□□□□ -0.5
PHACTR4-204ENST00000493669 PCNX4Q63HM2 1172 aa11.94□□□□□ -0.5
PHACTR4-204ENST00000493669 C12orf42Q96LP6 360 aa11.94□□□□□ -0.5
PHACTR4-204ENST00000493669 WDR24Q96S15 920 aa11.94□□□□□ -0.5
PHACTR4-204ENST00000493669 MAF1Q9H063 256 aa11.94□□□□□ -0.5
PHACTR4-204ENST00000493669 CGNQ9P2M7 1197 aaKnown RBP11.94□□□□□ -0.5
PHACTR4-204ENST00000493669 SEL1LQ9UBV2 794 aa11.94□□□□□ -0.5
PHACTR4-204ENST00000493669 UBE4BO95155 1302 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 PDXKO00764 312 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 CETN3O15182 167 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 FANCGO15287 622 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 URI1O94763 535 aaPredicted RBP11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 MAP3K9P80192 1104 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 KNOP1Q1ED39 458 aaKnown RBP11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 WDR59Q6PJI9 974 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 SFR1Q86XK3 245 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 EEF2KMTQ96G04 330 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 TANGO6Q9C0B7 1094 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 HAUS4Q9H6D7 363 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 IPO5O00410 1097 aaKnown RBP11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 EIF3DO15371 548 aaKnown RBP eCLIP11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 CALUO43852 315 aaPredicted RBP11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 FLOT1O75955 427 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 RINT1Q6NUQ1 792 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 TRIM59Q8IWR1 403 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 ACRBPQ8NEB7 543 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 DYDC2Q96IM9 177 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 CHP1Q99653 195 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 FGFBP2Q9BYJ0 223 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 NUCKS1Q9H1E3 243 aaKnown RBP11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 LZTFL1Q9NQ48 299 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 AGPAT5Q9NUQ2 364 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 RGL1Q9NZL6 768 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 TBC1D7Q9P0N9 293 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 PLAGL2Q9UPG8 496 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 CTDP1Q9Y5B0 961 aaPredicted RBP11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 UBIAD1Q9Y5Z9 338 aa11.93□□□□□ -0.5
PHACTR4-204ENST00000493669 EIF3CLB5ME19 914 aaKnown RBP11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 BACE1P56817 501 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 CACNB1Q02641 598 aaPredicted RBP11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 MTMR2Q13614 643 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 R3HDM1Q15032 1099 aaKnown RBP11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 NBPF12Q5TAG4 269 aaPredicted RBP11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 EIF3CQ99613 913 aaKnown RBP11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 RUSC1Q9BVN2 902 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 UNC45AQ9H3U1 944 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 ZHX3Q9H4I2 956 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 ODF2LQ9ULJ1 636 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 ZNF541Q9H0D2 1346 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 NFIBO00712 420 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 IPO7O95373 1038 aaKnown RBP11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 ARP10275 920 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 OAZ1P54368 228 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 NFIL3Q16649 462 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 XRRA1Q6P2D8 792 aa11.92□□□□□ -0.5
PHACTR4-204ENST00000493669 SAMD1Q6SPF0 538 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms