RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 URGCPQ8TCY9 931 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 SEPT1Q8WYJ6 367 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 RIT2Q99578 217 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 SLC24A3Q9HC58 644 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 PPME1Q9Y570 386 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 H0YHG0 523 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 MAGEB2O15479 319 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 LDHAP00338 332 aaKnown RBP6.92□□□□□ -1.3
NF1-215ENST00000493220 APLP1P51693 650 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 CTTNQ14247 550 aaKnown RBP6.92□□□□□ -1.3
NF1-215ENST00000493220 PDIA5Q14554 519 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 PCNX4Q63HM2 1172 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 METTL23Q86XA0 190 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 CCDC117Q8IWD4 279 aaPredicted RBP6.92□□□□□ -1.3
NF1-215ENST00000493220 GSDMAQ96QA5 445 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 LBHD1Q9BQE6 289 aaPredicted RBP6.92□□□□□ -1.3
NF1-215ENST00000493220 RANBP17Q9H2T7 1088 aaKnown RBP6.92□□□□□ -1.3
NF1-215ENST00000493220 SLC45A1Q9Y2W3 748 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 PCDHB6Q9Y5E3 794 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 ATP8B3O60423 1300 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 TNNI1P19237 187 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 KARSQ15046 597 aaKnown RBP6.92□□□□□ -1.3
NF1-215ENST00000493220 SKIDA1Q1XH10 827 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 L3MBTL3Q96JM7 780 aaPredicted RBP6.92□□□□□ -1.3
NF1-215ENST00000493220 VTA1Q9NP79 307 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 KCND2Q9NZV8 630 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 GABBR1Q9UBS5 961 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 INO80B-WBP1J3KQ70 363 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 MSCO60682 206 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 GNRH1P01148 92 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 KRT19P08727 400 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 KRT5P13647 590 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 PRMT2P55345 433 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 RAD51AP2Q09MP3 1159 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 SEC23AQ15436 765 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 SWSAP1Q6NVH7 229 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 CCDC84Q86UT8 332 aaPredicted RBP6.92□□□□□ -1.3
NF1-215ENST00000493220 NELFCDQ8IXH7 590 aa6.92□□□□□ -1.3
NF1-215ENST00000493220 YBX3P16989 372 aaKnown RBP eCLIP6.91□□□□□ -1.36e-6■□□□□ 10.6
NF1-215ENST00000493220 STAT5BP51692 787 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 LMBR1Q8WVP7 490 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 RAD54LQ92698 747 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 DHTKD1Q96HY7 919 aaPredicted RBP6.91□□□□□ -1.3
NF1-215ENST00000493220 DYDC2Q96IM9 177 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 PLVAPQ9BX97 442 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 NUCKS1Q9H1E3 243 aaKnown RBP6.91□□□□□ -1.3
NF1-215ENST00000493220 RIOX1Q9H6W3 641 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 RCOR1Q9UKL0 485 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 HNRNPDLO14979 420 aaKnown RBP6.91□□□□□ -1.3
NF1-215ENST00000493220 KIF5CO60282 957 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 USP2O75604 605 aaPredicted RBP6.91□□□□□ -1.3
NF1-215ENST00000493220 GGPS1O95749 300 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 CHGBP05060 677 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 TMEM191BP0C7N4 346 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 MUTP22033 750 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 STX17P56962 302 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 GRIK5Q16478 980 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 FAM173BQ6P4H8 233 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 FAM43BQ6ZT52 329 aaPredicted RBP6.91□□□□□ -1.3
NF1-215ENST00000493220 POTEDQ86YR6 584 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 ZFPM1Q8IX07 1006 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 RNF169Q8NCN4 708 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 BANK1Q8NDB2 785 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 PSPC1Q8WXF1 523 aaKnown RBP6.91□□□□□ -1.3
NF1-215ENST00000493220 POMGNT1Q8WZA1 660 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 ANKFY1Q9P2R3 1169 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 SEL1LQ9UBV2 794 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 PARP2Q9UGN5 583 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 ADAMTS7Q9UKP4 1686 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 ANKRD36CQ5JPF3 1778 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 SLFN14P0C7P3 912 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 SP3Q02447 781 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 PNOCQ13519 176 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 C7orf43Q8WVR3 580 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 ERCC4Q92889 916 aaPredicted RBP6.91□□□□□ -1.3
NF1-215ENST00000493220 CLIC6Q96NY7 704 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 KIAA1586Q9HCI6 787 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 DENND3A2RUS2 1198 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 DYNC1LI2O43237 492 aaPredicted RBP6.91□□□□□ -1.3
NF1-215ENST00000493220 MYCP01106 439 aaPredicted RBP6.91□□□□□ -1.3
NF1-215ENST00000493220 XKR3Q5GH77 459 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 RESP18Q5W5W9 173 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 ZNF746Q6NUN9 644 aaPredicted RBP6.91□□□□□ -1.3
NF1-215ENST00000493220 CPLX3Q8WVH0 158 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 CCDC94Q9BW85 323 aaPredicted RBP6.91□□□□□ -1.3
NF1-215ENST00000493220 MOV10L1Q9BXT6 1211 aaKnown RBP6.91□□□□□ -1.3
NF1-215ENST00000493220 PXMP2Q9NR77 195 aa6.91□□□□□ -1.3
NF1-215ENST00000493220 CGNQ9P2M7 1197 aaKnown RBP6.91□□□□□ -1.3
NF1-215ENST00000493220 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.91□□□□□ -1.3
NF1-215ENST00000493220 ASAP2O43150 1006 aa6.9□□□□□ -1.3
NF1-215ENST00000493220 GAS2O43903 313 aaKnown RBP6.9□□□□□ -1.3
NF1-215ENST00000493220 C6orf222P0C671 652 aaPredicted RBP6.9□□□□□ -1.3
NF1-215ENST00000493220 XRCC5P13010 732 aaKnown RBP6.9□□□□□ -1.3
NF1-215ENST00000493220 PLCG1P19174 1290 aa6.9□□□□□ -1.3
NF1-215ENST00000493220 RNASELQ05823 741 aaKnown RBP6.9□□□□□ -1.3
NF1-215ENST00000493220 TROAPQ12815 778 aa6.9□□□□□ -1.3
NF1-215ENST00000493220 PPFIA1Q13136 1202 aa6.9□□□□□ -1.3
NF1-215ENST00000493220 SPRYD7Q5W111 196 aa6.9□□□□□ -1.3
NF1-215ENST00000493220 AIFM3Q96NN9 605 aa6.9□□□□□ -1.3
NF1-215ENST00000493220 P2RX7Q99572 595 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms