RNA–Protein interactions for RNA: ENST00000490869.1

UBA1-209, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2

Gene UBA1, Length 917 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-209ENST00000490869 TEX2Q8IWB9 1127 aa12.48□□□□□ -0.41
UBA1-209ENST00000490869 LMBR1Q8WVP7 490 aa12.48□□□□□ -0.41
UBA1-209ENST00000490869 SEPT1Q8WYJ6 367 aa12.48□□□□□ -0.41
UBA1-209ENST00000490869 PGBD1Q96JS3 809 aa12.48□□□□□ -0.41
UBA1-209ENST00000490869 BARHL2Q9NY43 387 aa12.48□□□□□ -0.41
UBA1-209ENST00000490869 SNX14Q9Y5W7 946 aa12.48□□□□□ -0.41
UBA1-209ENST00000490869 CDH23Q9H251 3354 aa12.47□□□□□ -0.41
UBA1-209ENST00000490869 TET1Q8NFU7 2136 aa12.47□□□□□ -0.41
UBA1-209ENST00000490869 NRCAMQ92823 1304 aa12.47□□□□□ -0.41
UBA1-209ENST00000490869 GSTTP1A0A1W2PQM5 241 aa12.47□□□□□ -0.41
UBA1-209ENST00000490869 LCHNA4D1U4 455 aa12.47□□□□□ -0.41
UBA1-209ENST00000490869 SMCO2A6NFE2 343 aa12.47□□□□□ -0.41
UBA1-209ENST00000490869 RFXAPO00287 272 aa12.47□□□□□ -0.41
UBA1-209ENST00000490869 FOSP01100 380 aaPredicted RBP12.47□□□□□ -0.41
UBA1-209ENST00000490869 MARK3P27448 753 aa12.47□□□□□ -0.41
UBA1-209ENST00000490869 ADD1P35611 737 aaKnown RBP12.47□□□□□ -0.41
UBA1-209ENST00000490869 ADAM17P78536 824 aa12.47□□□□□ -0.41
UBA1-209ENST00000490869 BLOC1S2Q6QNY1 142 aa12.47□□□□□ -0.41
UBA1-209ENST00000490869 MICALL1Q8N3F8 863 aa12.47□□□□□ -0.41
UBA1-209ENST00000490869 DBF4BQ8NFT6 615 aa12.47□□□□□ -0.41
UBA1-209ENST00000490869 ARNTL2Q8WYA1 636 aa12.47□□□□□ -0.41
UBA1-209ENST00000490869 BRF1Q92994 677 aa12.47□□□□□ -0.41
UBA1-209ENST00000490869 MXRA8Q9BRK3 442 aa12.47□□□□□ -0.41
UBA1-209ENST00000490869 ANO3Q9BYT9 981 aa12.47□□□□□ -0.41
UBA1-209ENST00000490869 ERAP1Q9NZ08 941 aa12.47□□□□□ -0.41
UBA1-209ENST00000490869 CCDC196A0A1B0GTZ2 297 aa12.46□□□□□ -0.41
UBA1-209ENST00000490869 EPOPA6NHQ4 379 aa12.46□□□□□ -0.41
UBA1-209ENST00000490869 GTPBP6O43824 516 aaPredicted RBP12.46□□□□□ -0.41
UBA1-209ENST00000490869 REC8O95072 547 aa12.46□□□□□ -0.41
UBA1-209ENST00000490869 GJB5O95377 273 aa12.46□□□□□ -0.41
UBA1-209ENST00000490869 AP3B2Q13367 1082 aa12.46□□□□□ -0.41
UBA1-209ENST00000490869 PFKFB3Q16875 520 aaPredicted RBP12.46□□□□□ -0.41
UBA1-209ENST00000490869 PLEKHG4Q58EX7 1191 aa12.46□□□□□ -0.41
UBA1-209ENST00000490869 TJAP1Q5JTD0 557 aa12.46□□□□□ -0.41
UBA1-209ENST00000490869 FAM117BQ6P1L5 589 aa12.46□□□□□ -0.41
UBA1-209ENST00000490869 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.46□□□□□ -0.413e-7■■□□□ 13.2
UBA1-209ENST00000490869 CYP2W1Q8TAV3 490 aa12.46□□□□□ -0.41
UBA1-209ENST00000490869 SEPT8Q92599 483 aa12.46□□□□□ -0.41
UBA1-209ENST00000490869 SYMPKQ92797 1274 aaKnown RBP12.46□□□□□ -0.41
UBA1-209ENST00000490869 GLG1Q92896 1179 aa12.46□□□□□ -0.41
UBA1-209ENST00000490869 RAD9AQ99638 391 aa12.46□□□□□ -0.41
UBA1-209ENST00000490869 GLT8D2Q9H1C3 349 aa12.46□□□□□ -0.41
UBA1-209ENST00000490869 SMARCAD1Q9H4L7 1026 aa12.46□□□□□ -0.41
UBA1-209ENST00000490869 JPH1Q9HDC5 661 aaPredicted RBP12.46□□□□□ -0.41
UBA1-209ENST00000490869 KCNH7Q9NS40 1196 aa12.46□□□□□ -0.41
UBA1-209ENST00000490869 TMEM260Q9NX78 707 aa12.46□□□□□ -0.41
UBA1-209ENST00000490869 THEGQ9P2T0 379 aa12.46□□□□□ -0.41
UBA1-209ENST00000490869 SLC9A2Q9UBY0 812 aa12.46□□□□□ -0.41
UBA1-209ENST00000490869 NID2Q14112 1375 aa12.45□□□□□ -0.42
UBA1-209ENST00000490869 AMHP03971 560 aa12.45□□□□□ -0.42
UBA1-209ENST00000490869 ARP10275 920 aa12.45□□□□□ -0.42
UBA1-209ENST00000490869 SCG2P13521 617 aa12.45□□□□□ -0.42
UBA1-209ENST00000490869 RPS6KB1P23443 525 aa12.45□□□□□ -0.42
UBA1-209ENST00000490869 PSMA5P28066 241 aa12.45□□□□□ -0.42
UBA1-209ENST00000490869 SREBF1P36956 1147 aa12.45□□□□□ -0.42
UBA1-209ENST00000490869 CLK2P49760 499 aaKnown RBP12.45□□□□□ -0.42
UBA1-209ENST00000490869 PPFIA1Q13136 1202 aa12.45□□□□□ -0.42
UBA1-209ENST00000490869 MKRN4PQ13434 485 aaPredicted RBP12.45□□□□□ -0.42
UBA1-209ENST00000490869 CEP55Q53EZ4 464 aa12.45□□□□□ -0.42
UBA1-209ENST00000490869 SPRED2Q7Z698 418 aa12.45□□□□□ -0.42
UBA1-209ENST00000490869 MYOCDQ8IZQ8 938 aa12.45□□□□□ -0.42
UBA1-209ENST00000490869 ATXN2LQ8WWM7 1075 aaKnown RBP12.45□□□□□ -0.42
UBA1-209ENST00000490869 SDF4Q9BRK5 362 aa12.45□□□□□ -0.42
UBA1-209ENST00000490869 OSBPL7Q9BZF2 842 aa12.45□□□□□ -0.42
UBA1-209ENST00000490869 MTCH2Q9Y6C9 303 aa12.45□□□□□ -0.42
UBA1-209ENST00000490869 NFASCO94856 1347 aa12.44□□□□□ -0.42
UBA1-209ENST00000490869 POU3F3P20264 500 aaPredicted RBP12.44□□□□□ -0.42
UBA1-209ENST00000490869 ZNF76P36508 570 aa12.44□□□□□ -0.42
UBA1-209ENST00000490869 GRB10Q13322 594 aa12.44□□□□□ -0.42
UBA1-209ENST00000490869 GRIK4Q16099 956 aa12.44□□□□□ -0.42
UBA1-209ENST00000490869 FAM26DQ5JW98 314 aa12.44□□□□□ -0.42
UBA1-209ENST00000490869 JAKMIP3Q5VZ66 844 aa12.44□□□□□ -0.42
UBA1-209ENST00000490869 TAF2Q6P1X5 1199 aa12.44□□□□□ -0.42
UBA1-209ENST00000490869 RUFY4Q6ZNE9 571 aa12.44□□□□□ -0.42
UBA1-209ENST00000490869 FBXL16Q8N461 479 aa12.44□□□□□ -0.42
UBA1-209ENST00000490869 PCYT2Q99447 389 aa12.44□□□□□ -0.42
UBA1-209ENST00000490869 AGXT2Q9BYV1 514 aa12.44□□□□□ -0.42
UBA1-209ENST00000490869 TSPYL2Q9H2G4 693 aaPredicted RBP12.44□□□□□ -0.42
UBA1-209ENST00000490869 AZI2Q9H6S1 392 aa12.44□□□□□ -0.42
UBA1-209ENST00000490869 AGO4Q9HCK5 861 aaKnown RBP12.44□□□□□ -0.42
UBA1-209ENST00000490869 TUBE1Q9UJT0 475 aa12.44□□□□□ -0.42
UBA1-209ENST00000490869 COL4A4P53420 1690 aaPredicted RBP12.44□□□□□ -0.42
UBA1-209ENST00000490869 ESYT2A0FGR8 921 aa12.43□□□□□ -0.42
UBA1-209ENST00000490869 LINC01553A4QN01 128 aa12.43□□□□□ -0.42
UBA1-209ENST00000490869 MEIS1O00470 390 aa12.43□□□□□ -0.42
UBA1-209ENST00000490869 PRPF3O43395 683 aaKnown RBP12.43□□□□□ -0.42
UBA1-209ENST00000490869 NEFLP07196 543 aa12.43□□□□□ -0.42
UBA1-209ENST00000490869 ACTR2P61160 394 aa12.43□□□□□ -0.42
UBA1-209ENST00000490869 IGBP1P78318 339 aa12.43□□□□□ -0.42
UBA1-209ENST00000490869 AKAP17AQ02040 695 aaKnown RBP12.43□□□□□ -0.42
UBA1-209ENST00000490869 ITGB3BPQ13352 177 aaPredicted RBP12.43□□□□□ -0.42
UBA1-209ENST00000490869 SKIV2LQ15477 1246 aaKnown RBP12.43□□□□□ -0.42
UBA1-209ENST00000490869 KRT40Q6A162 431 aa12.43□□□□□ -0.42
UBA1-209ENST00000490869 RPAINQ86UA6 219 aa12.43□□□□□ -0.42
UBA1-209ENST00000490869 RSPH3Q86UC2 560 aa12.43□□□□□ -0.42
UBA1-209ENST00000490869 CCDC12Q8WUD4 166 aaPredicted RBP12.43□□□□□ -0.42
UBA1-209ENST00000490869 APBB2Q92870 758 aa12.43□□□□□ -0.42
UBA1-209ENST00000490869 PHKBQ93100 1093 aa12.43□□□□□ -0.42
UBA1-209ENST00000490869 ASB2Q96Q27 587 aa12.43□□□□□ -0.42
UBA1-209ENST00000490869 IFIH1Q9BYX4 1025 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms