RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 MTG1Q9BT17 334 aaPredicted RBP22.37■■□□□ 1.17
SHROOM3-209ENST00000490690 TTC12Q9H892 705 aaPredicted RBP22.37■■□□□ 1.17
SHROOM3-209ENST00000490690 SAMM50Q9Y512 469 aa22.37■■□□□ 1.17
SHROOM3-209ENST00000490690 YEATS4O95619 227 aa22.36■■□□□ 1.17
SHROOM3-209ENST00000490690 TXKP42681 527 aa22.36■■□□□ 1.17
SHROOM3-209ENST00000490690 FXR2P51116 673 aaKnown RBP eCLIP22.36■■□□□ 1.17
SHROOM3-209ENST00000490690 KRT85P78386 507 aa22.36■■□□□ 1.17
SHROOM3-209ENST00000490690 PKP1Q13835 747 aa22.36■■□□□ 1.17
SHROOM3-209ENST00000490690 PDIA5Q14554 519 aa22.36■■□□□ 1.17
SHROOM3-209ENST00000490690 MIER3Q7Z3K6 550 aa22.36■■□□□ 1.17
SHROOM3-209ENST00000490690 SMARCAD1Q9H4L7 1026 aa22.36■■□□□ 1.17
SHROOM3-209ENST00000490690 PHF24Q9UPV7 400 aa22.36■■□□□ 1.17
SHROOM3-209ENST00000490690 EMSYQ7Z589 1322 aa22.35■■□□□ 1.17
SHROOM3-209ENST00000490690 DDX39AO00148 427 aaKnown RBP22.35■■□□□ 1.17
SHROOM3-209ENST00000490690 ATG7O95352 703 aa22.35■■□□□ 1.17
SHROOM3-209ENST00000490690 TCF7P36402 384 aaPredicted RBP22.35■■□□□ 1.17
SHROOM3-209ENST00000490690 NASPP49321 788 aaPredicted RBP22.35■■□□□ 1.17
SHROOM3-209ENST00000490690 KCNA10Q16322 511 aa22.35■■□□□ 1.17
SHROOM3-209ENST00000490690 FOXD4L5Q5VV16 416 aaPredicted RBP22.35■■□□□ 1.17
SHROOM3-209ENST00000490690 HAUS3Q68CZ6 603 aa22.35■■□□□ 1.17
SHROOM3-209ENST00000490690 FOXD4L4Q8WXT5 416 aaPredicted RBP22.35■■□□□ 1.17
SHROOM3-209ENST00000490690 ATP6V0A1Q93050 837 aa22.35■■□□□ 1.17
SHROOM3-209ENST00000490690 AK8Q96MA6 479 aa22.35■■□□□ 1.17
SHROOM3-209ENST00000490690 DISC1Q9NRI5 854 aa22.35■■□□□ 1.17
SHROOM3-209ENST00000490690 CCDC85CA6NKD9 419 aa22.34■■□□□ 1.17
SHROOM3-209ENST00000490690 ASGR1P07306 291 aa22.34■■□□□ 1.17
SHROOM3-209ENST00000490690 MYL3P08590 195 aa22.34■■□□□ 1.17
SHROOM3-209ENST00000490690 SUPT20HL2P0C7V6 817 aa22.34■■□□□ 1.17
SHROOM3-209ENST00000490690 ACLYP53396 1101 aa22.34■■□□□ 1.17
SHROOM3-209ENST00000490690 SP4Q02446 784 aa22.34■■□□□ 1.17
SHROOM3-209ENST00000490690 NBR1Q14596 966 aa22.34■■□□□ 1.17
SHROOM3-209ENST00000490690 STK38Q15208 465 aa22.34■■□□□ 1.17
SHROOM3-209ENST00000490690 CCSAPQ6IQ19 270 aaPredicted RBP22.34■■□□□ 1.17
SHROOM3-209ENST00000490690 PLPPR4Q7Z2D5 763 aa22.34■■□□□ 1.17
SHROOM3-209ENST00000490690 NECAB2Q7Z6G3 386 aa22.34■■□□□ 1.17
SHROOM3-209ENST00000490690 KCNG4Q8TDN1 519 aa22.34■■□□□ 1.17
SHROOM3-209ENST00000490690 SCAND2PQ9GZW5 306 aaPredicted RBP22.34■■□□□ 1.17
SHROOM3-209ENST00000490690 TMEM60Q9H2L4 133 aa22.34■■□□□ 1.17
SHROOM3-209ENST00000490690 ERAP1Q9NZ08 941 aa22.34■■□□□ 1.17
SHROOM3-209ENST00000490690 WNT7AO00755 349 aa22.33■■□□□ 1.17
SHROOM3-209ENST00000490690 BACH1O14867 736 aa22.33■■□□□ 1.17
SHROOM3-209ENST00000490690 CTAGE5O15320 804 aa22.33■■□□□ 1.17
SHROOM3-209ENST00000490690 SLC26A4O43511 780 aa22.33■■□□□ 1.17
SHROOM3-209ENST00000490690 LGR5O75473 907 aa22.33■■□□□ 1.17
SHROOM3-209ENST00000490690 PURAQ00577 322 aaKnown RBP22.33■■□□□ 1.17
SHROOM3-209ENST00000490690 BEX3Q00994 111 aa22.33■■□□□ 1.17
SHROOM3-209ENST00000490690 SLC39A14Q15043 492 aa22.33■■□□□ 1.17
SHROOM3-209ENST00000490690 EPHA7Q15375 998 aa22.33■■□□□ 1.17
SHROOM3-209ENST00000490690 TMEM63BQ5T3F8 832 aa22.33■■□□□ 1.17
SHROOM3-209ENST00000490690 B3GNT9Q6UX72 402 aa22.33■■□□□ 1.17
SHROOM3-209ENST00000490690 ABHD15Q6UXT9 468 aa22.33■■□□□ 1.17
SHROOM3-209ENST00000490690 KCTD17Q8N5Z5 321 aa22.33■■□□□ 1.17
SHROOM3-209ENST00000490690 C4orf32Q8N8J7 132 aa22.33■■□□□ 1.17
SHROOM3-209ENST00000490690 AFAP1L1Q8TED9 768 aa22.33■■□□□ 1.17
SHROOM3-209ENST00000490690 GLG1Q92896 1179 aa22.33■■□□□ 1.17
SHROOM3-209ENST00000490690 FAM167AQ96KS9 214 aa22.33■■□□□ 1.17
SHROOM3-209ENST00000490690 UNC45AQ9H3U1 944 aa22.33■■□□□ 1.17
SHROOM3-209ENST00000490690 VAV3Q9UKW4 847 aa22.33■■□□□ 1.17
SHROOM3-209ENST00000490690 CHMP2AO43633 222 aa22.32■■□□□ 1.16
SHROOM3-209ENST00000490690 PPP6R2O75170 966 aa22.32■■□□□ 1.16
SHROOM3-209ENST00000490690 F2P00734 622 aa22.32■■□□□ 1.16
SHROOM3-209ENST00000490690 LGALS2P05162 132 aa22.32■■□□□ 1.16
SHROOM3-209ENST00000490690 MUTP22033 750 aa22.32■■□□□ 1.16
SHROOM3-209ENST00000490690 USP28Q96RU2 1077 aa22.32■■□□□ 1.16
SHROOM3-209ENST00000490690 STARD7Q9NQZ5 370 aa22.32■■□□□ 1.16
SHROOM3-209ENST00000490690 ZNF302Q9NR11 478 aa22.32■■□□□ 1.16
SHROOM3-209ENST00000490690 ZDHHC9Q9Y397 364 aa22.32■■□□□ 1.16
SHROOM3-209ENST00000490690 IGKV6D-21A0A0A0MT36 114 aa22.31■■□□□ 1.16
SHROOM3-209ENST00000490690 GSTTP1A0A1W2PQM5 241 aa22.31■■□□□ 1.16
SHROOM3-209ENST00000490690 MYADML2A6NDP7 307 aa22.31■■□□□ 1.16
SHROOM3-209ENST00000490690 H3BRB1 525 aa22.31■■□□□ 1.16
SHROOM3-209ENST00000490690 CCNE2O96020 404 aa22.31■■□□□ 1.16
SHROOM3-209ENST00000490690 P4HBP07237 508 aaKnown RBP22.31■■□□□ 1.16
SHROOM3-209ENST00000490690 LONP1P36776 959 aaKnown RBP22.31■■□□□ 1.16
SHROOM3-209ENST00000490690 STAT5BP51692 787 aa22.31■■□□□ 1.16
SHROOM3-209ENST00000490690 CSPP1Q1MSJ5 1256 aa22.31■■□□□ 1.16
SHROOM3-209ENST00000490690 NCAPH2Q6IBW4 605 aa22.31■■□□□ 1.16
SHROOM3-209ENST00000490690 VTI1AQ96AJ9 217 aa22.31■■□□□ 1.16
SHROOM3-209ENST00000490690 TUT1Q9H6E5 874 aaKnown RBP22.31■■□□□ 1.16
SHROOM3-209ENST00000490690 C11orf49Q9H6J7 331 aa22.31■■□□□ 1.16
SHROOM3-209ENST00000490690 LRWD1Q9UFC0 647 aa22.31■■□□□ 1.16
SHROOM3-209ENST00000490690 CLIC4Q9Y696 253 aa22.31■■□□□ 1.16
SHROOM3-209ENST00000490690 KIAA0100Q14667 2235 aaKnown RBP22.31■■□□□ 1.16
SHROOM3-209ENST00000490690 MROH7Q68CQ1 1323 aa22.31■■□□□ 1.16
SHROOM3-209ENST00000490690 A0A0U1RQG5 324 aaPredicted RBP22.3■■□□□ 1.16
SHROOM3-209ENST00000490690 A0A1W2PQ45 241 aaPredicted RBP22.3■■□□□ 1.16
SHROOM3-209ENST00000490690 A0A1W2PQY0 241 aa22.3■■□□□ 1.16
SHROOM3-209ENST00000490690 SPTLC2O15270 562 aa22.3■■□□□ 1.16
SHROOM3-209ENST00000490690 SORBS3O60504 671 aa22.3■■□□□ 1.16
SHROOM3-209ENST00000490690 TECP42680 631 aa22.3■■□□□ 1.16
SHROOM3-209ENST00000490690 PTPN11Q06124 597 aaPredicted RBP22.3■■□□□ 1.16
SHROOM3-209ENST00000490690 SPIRE1Q08AE8 756 aa22.3■■□□□ 1.16
SHROOM3-209ENST00000490690 KRT79Q5XKE5 535 aa22.3■■□□□ 1.16
SHROOM3-209ENST00000490690 FAM173BQ6P4H8 233 aa22.3■■□□□ 1.16
SHROOM3-209ENST00000490690 IGSF22Q8N9C0 903 aa22.3■■□□□ 1.16
SHROOM3-209ENST00000490690 KRI1Q8N9T8 703 aaKnown RBP22.3■■□□□ 1.16
SHROOM3-209ENST00000490690 LINC00301Q8NCQ3 95 aa22.3■■□□□ 1.16
SHROOM3-209ENST00000490690 SRPRBQ9Y5M8 271 aaKnown RBP22.3■■□□□ 1.16
SHROOM3-209ENST00000490690 GNAT1P11488 350 aa22.29■■□□□ 1.16
SHROOM3-209ENST00000490690 NCLP19338 710 aaKnown RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms