RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 PTGISQ16647 500 aa10.61□□□□□ -0.71
SRRM1-217ENST00000490543 SLC30A10Q6XR72 485 aa10.61□□□□□ -0.71
SRRM1-217ENST00000490543 FAM178BQ8IXR5 827 aa10.61□□□□□ -0.71
SRRM1-217ENST00000490543 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.61□□□□□ -0.71
SRRM1-217ENST00000490543 CLEC4DQ8WXI8 215 aa10.61□□□□□ -0.71
SRRM1-217ENST00000490543 KCTD15Q96SI1 283 aaPredicted RBP10.61□□□□□ -0.71
SRRM1-217ENST00000490543 RANBP17Q9H2T7 1088 aaKnown RBP10.61□□□□□ -0.71
SRRM1-217ENST00000490543 UBE2ZQ9H832 354 aaPredicted RBP10.61□□□□□ -0.71
SRRM1-217ENST00000490543 CDV3Q9UKY7 258 aaKnown RBP10.61□□□□□ -0.71
SRRM1-217ENST00000490543 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.61□□□□□ -0.71
SRRM1-217ENST00000490543 FOXP2O15409 715 aa10.6□□□□□ -0.71
SRRM1-217ENST00000490543 ARIH2O95376 493 aa10.6□□□□□ -0.71
SRRM1-217ENST00000490543 ZFYP08048 801 aaPredicted RBP10.6□□□□□ -0.71
SRRM1-217ENST00000490543 IL9P15248 144 aa10.6□□□□□ -0.71
SRRM1-217ENST00000490543 PTPN11Q06124 597 aaPredicted RBP10.6□□□□□ -0.71
SRRM1-217ENST00000490543 PPP2R5BQ15173 497 aa10.6□□□□□ -0.71
SRRM1-217ENST00000490543 CCDC96Q2M329 555 aa10.6□□□□□ -0.71
SRRM1-217ENST00000490543 GDF6Q6KF10 455 aaPredicted RBP10.6□□□□□ -0.71
SRRM1-217ENST00000490543 GJD3Q8N144 294 aa10.6□□□□□ -0.71
SRRM1-217ENST00000490543 MEIOBQ8N635 442 aa10.6□□□□□ -0.71
SRRM1-217ENST00000490543 DHX38Q92620 1227 aaKnown RBP10.6□□□□□ -0.71
SRRM1-217ENST00000490543 NACAP1Q9BZK3 213 aa10.6□□□□□ -0.71
SRRM1-217ENST00000490543 NAPBQ9H115 298 aa10.6□□□□□ -0.71
SRRM1-217ENST00000490543 LMCD1Q9NZU5 365 aa10.6□□□□□ -0.71
SRRM1-217ENST00000490543 NOD1Q9Y239 953 aa10.6□□□□□ -0.71
SRRM1-217ENST00000490543 COL4A4P53420 1690 aaPredicted RBP10.6□□□□□ -0.71
SRRM1-217ENST00000490543 LINC01553A4QN01 128 aa10.59□□□□□ -0.71
SRRM1-217ENST00000490543 TSPY2A6NKD2 308 aa10.59□□□□□ -0.71
SRRM1-217ENST00000490543 PRR33A8MZF0 331 aa10.59□□□□□ -0.71
SRRM1-217ENST00000490543 KPNA6O60684 536 aa10.59□□□□□ -0.71
SRRM1-217ENST00000490543 NBNO60934 754 aa10.59□□□□□ -0.71
SRRM1-217ENST00000490543 GJB5O95377 273 aa10.59□□□□□ -0.71
SRRM1-217ENST00000490543 SLC3A2P08195 630 aaKnown RBP10.59□□□□□ -0.71
SRRM1-217ENST00000490543 TXNP10599 105 aaKnown RBP10.59□□□□□ -0.71
SRRM1-217ENST00000490543 KCNA5P22460 613 aa10.59□□□□□ -0.71
SRRM1-217ENST00000490543 EDNRBP24530 442 aa10.59□□□□□ -0.71
SRRM1-217ENST00000490543 ERVK-21P61565 698 aa10.59□□□□□ -0.71
SRRM1-217ENST00000490543 RPS6P62753 249 aaKnown RBP10.59□□□□□ -0.71
SRRM1-217ENST00000490543 LEXMQ3ZCV2 418 aa10.59□□□□□ -0.71
SRRM1-217ENST00000490543 BRDTQ58F21 947 aaPredicted RBP10.59□□□□□ -0.71
SRRM1-217ENST00000490543 PPP1R26Q5T8A7 1209 aaPredicted RBP10.59□□□□□ -0.71
SRRM1-217ENST00000490543 SYDE2Q5VT97 1194 aa10.59□□□□□ -0.71
SRRM1-217ENST00000490543 FAM117BQ6P1L5 589 aa10.59□□□□□ -0.71
SRRM1-217ENST00000490543 BTNL9Q6UXG8 535 aa10.59□□□□□ -0.71
SRRM1-217ENST00000490543 SCFD2Q8WU76 684 aa10.59□□□□□ -0.71
SRRM1-217ENST00000490543 AFG1LQ8WV93 481 aa10.59□□□□□ -0.71
SRRM1-217ENST00000490543 KAT2BQ92831 832 aa10.59□□□□□ -0.71
SRRM1-217ENST00000490543 UIMC1Q96RL1 719 aa10.59□□□□□ -0.71
SRRM1-217ENST00000490543 MYO7AQ13402 2215 aa10.59□□□□□ -0.71
SRRM1-217ENST00000490543 TANC1Q9C0D5 1861 aa10.59□□□□□ -0.71
SRRM1-217ENST00000490543 FRMPD2Q68DX3 1309 aaPredicted RBP10.58□□□□□ -0.71
SRRM1-217ENST00000490543 LOC102724159A0A0B4J2E5 919 aa10.58□□□□□ -0.72
SRRM1-217ENST00000490543 NKRFO15226 690 aaKnown RBP eCLIP10.58□□□□□ -0.72
SRRM1-217ENST00000490543 RANBP6O60518 1105 aaKnown RBP10.58□□□□□ -0.72
SRRM1-217ENST00000490543 CXCL10P02778 98 aa10.58□□□□□ -0.72
SRRM1-217ENST00000490543 SELPP16109 830 aa10.58□□□□□ -0.72
SRRM1-217ENST00000490543 NOVP48745 357 aa10.58□□□□□ -0.72
SRRM1-217ENST00000490543 PWP2Q15269 919 aaKnown RBP10.58□□□□□ -0.72
SRRM1-217ENST00000490543 LRRFIP1Q32MZ4 808 aaKnown RBP10.58□□□□□ -0.72
SRRM1-217ENST00000490543 ZMYM1Q5SVZ6 1142 aa10.58□□□□□ -0.72
SRRM1-217ENST00000490543 C6orf118Q5T5N4 469 aa10.58□□□□□ -0.72
SRRM1-217ENST00000490543 LCE2CQ5TA81 110 aa10.58□□□□□ -0.72
SRRM1-217ENST00000490543 CCDC62Q6P9F0 684 aa10.58□□□□□ -0.72
SRRM1-217ENST00000490543 RNF207Q6ZRF8 634 aa10.58□□□□□ -0.72
SRRM1-217ENST00000490543 LRRC8DQ7L1W4 858 aa10.58□□□□□ -0.72
SRRM1-217ENST00000490543 CAGE1Q8TC20 777 aa10.58□□□□□ -0.72
SRRM1-217ENST00000490543 AFAP1L1Q8TED9 768 aa10.58□□□□□ -0.72
SRRM1-217ENST00000490543 DCAF4Q8WV16 495 aa10.58□□□□□ -0.72
SRRM1-217ENST00000490543 TGS1Q96RS0 853 aaKnown RBP10.58□□□□□ -0.72
SRRM1-217ENST00000490543 RAD9AQ99638 391 aa10.58□□□□□ -0.72
SRRM1-217ENST00000490543 RAD50Q92878 1312 aa10.58□□□□□ -0.72
SRRM1-217ENST00000490543 CKBP12277 381 aa10.57□□□□□ -0.72
SRRM1-217ENST00000490543 MRE11P49959 708 aa10.57□□□□□ -0.72
SRRM1-217ENST00000490543 MBTPS1Q14703 1052 aa10.57□□□□□ -0.72
SRRM1-217ENST00000490543 LY6KQ17RY6 165 aa10.57□□□□□ -0.72
SRRM1-217ENST00000490543 INTS6LQ5JSJ4 861 aaKnown RBP10.57□□□□□ -0.72
SRRM1-217ENST00000490543 C20orf194Q5TEA3 1177 aa10.57□□□□□ -0.72
SRRM1-217ENST00000490543 CNKSR3Q6P9H4 555 aa10.57□□□□□ -0.72
SRRM1-217ENST00000490543 CHST3Q7LGC8 479 aa10.57□□□□□ -0.72
SRRM1-217ENST00000490543 LINC00528Q8N1L1 170 aa10.57□□□□□ -0.72
SRRM1-217ENST00000490543 TBC1D5Q92609 795 aa10.57□□□□□ -0.72
SRRM1-217ENST00000490543 ANKS1AQ92625 1134 aa10.57□□□□□ -0.72
SRRM1-217ENST00000490543 WNT8BQ93098 351 aa10.57□□□□□ -0.72
SRRM1-217ENST00000490543 TMEM47Q9BQJ4 181 aa10.57□□□□□ -0.72
SRRM1-217ENST00000490543 C17orf80Q9BSJ5 609 aa10.57□□□□□ -0.72
SRRM1-217ENST00000490543 HDAC6Q9UBN7 1215 aa10.57□□□□□ -0.72
SRRM1-217ENST00000490543 NXF1Q9UBU9 619 aaKnown RBP10.57□□□□□ -0.72
SRRM1-217ENST00000490543 ABHD14A-ACY1A0A1B0GW23 586 aa10.56□□□□□ -0.72
SRRM1-217ENST00000490543 SOBPA7XYQ1 873 aa10.56□□□□□ -0.72
SRRM1-217ENST00000490543 H3BQ06 376 aaPredicted RBP10.56□□□□□ -0.72
SRRM1-217ENST00000490543 MMP3P08254 477 aa10.56□□□□□ -0.72
SRRM1-217ENST00000490543 BMP2P12643 396 aa10.56□□□□□ -0.72
SRRM1-217ENST00000490543 ZNF200P98182 395 aaPredicted RBP10.56□□□□□ -0.72
SRRM1-217ENST00000490543 ARHGAP1Q07960 439 aa10.56□□□□□ -0.72
SRRM1-217ENST00000490543 VPS53Q5VIR6 699 aa10.56□□□□□ -0.72
SRRM1-217ENST00000490543 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.56□□□□□ -0.729e-11■■■□□ 16.3
SRRM1-217ENST00000490543 SEPT14Q6ZU15 432 aa10.56□□□□□ -0.72
SRRM1-217ENST00000490543 SESTD1Q86VW0 696 aa10.56□□□□□ -0.72
SRRM1-217ENST00000490543 CCDC155Q8N6L0 562 aa10.56□□□□□ -0.72
SRRM1-217ENST00000490543 OTUD7AQ8TE49 926 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms