RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 FAM83BQ5T0W9 1011 aa8.17□□□□□ -1.1
TM9SF3-206ENST00000490192 ZFYVE27Q5T4F4 411 aa8.17□□□□□ -1.1
TM9SF3-206ENST00000490192 CYB5RLQ6IPT4 315 aa8.17□□□□□ -1.1
TM9SF3-206ENST00000490192 ERAP2Q6P179 960 aa8.17□□□□□ -1.1
TM9SF3-206ENST00000490192 B3GNT9Q6UX72 402 aa8.17□□□□□ -1.1
TM9SF3-206ENST00000490192 SHISA5Q8N114 240 aa8.17□□□□□ -1.1
TM9SF3-206ENST00000490192 LMBR1Q8WVP7 490 aa8.17□□□□□ -1.1
TM9SF3-206ENST00000490192 CHAMP1Q96JM3 812 aa8.17□□□□□ -1.1
TM9SF3-206ENST00000490192 C1GALT1Q9NS00 363 aa8.17□□□□□ -1.1
TM9SF3-206ENST00000490192 C1orf112Q9NSG2 853 aa8.17□□□□□ -1.1
TM9SF3-206ENST00000490192 FBXL7Q9UJT9 491 aa8.17□□□□□ -1.1
TM9SF3-206ENST00000490192 SPO11Q9Y5K1 396 aa8.17□□□□□ -1.1
TM9SF3-206ENST00000490192 SLC12A8A0AV02 714 aa8.16□□□□□ -1.1
TM9SF3-206ENST00000490192 PRR33A8MZF0 331 aa8.16□□□□□ -1.1
TM9SF3-206ENST00000490192 PMM2O15305 246 aa8.16□□□□□ -1.1
TM9SF3-206ENST00000490192 FGAP02671 866 aa8.16□□□□□ -1.1
TM9SF3-206ENST00000490192 PDE6AP16499 860 aa8.16□□□□□ -1.1
TM9SF3-206ENST00000490192 TPP2P29144 1249 aaPredicted RBP8.16□□□□□ -1.1
TM9SF3-206ENST00000490192 LSP1P33241 339 aa8.16□□□□□ -1.1
TM9SF3-206ENST00000490192 PHC1P78364 1004 aa8.16□□□□□ -1.1
TM9SF3-206ENST00000490192 TNK2Q07912 1038 aa8.16□□□□□ -1.1
TM9SF3-206ENST00000490192 ZNF174Q15697 407 aa8.16□□□□□ -1.1
TM9SF3-206ENST00000490192 RTP2Q5QGT7 225 aa8.16□□□□□ -1.1
TM9SF3-206ENST00000490192 MCTP1Q6DN14 999 aa8.16□□□□□ -1.1
TM9SF3-206ENST00000490192 OGFOD3Q6PK18 319 aa8.16□□□□□ -1.1
TM9SF3-206ENST00000490192 ZNF765Q7L2R6 523 aa8.16□□□□□ -1.1
TM9SF3-206ENST00000490192 SLC35G2Q8TBE7 412 aa8.16□□□□□ -1.1
TM9SF3-206ENST00000490192 ELF4Q99607 663 aaPredicted RBP8.16□□□□□ -1.1
TM9SF3-206ENST00000490192 PHTF1Q9UMS5 762 aa8.16□□□□□ -1.1
TM9SF3-206ENST00000490192 TRBV23OR9-2A0A075B6M9 112 aa8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 MYO1BO43795 1136 aa8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 CTNND1O60716 968 aaKnown RBP8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 ZNF205O95201 554 aa8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 ZBTB48P10074 688 aaPredicted RBP8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 KRT15P19012 456 aa8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 JAM2P57087 298 aa8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 ZNF280AP59817 542 aaPredicted RBP8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 SMAD3P84022 425 aaKnown RBP8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 IRF9Q00978 393 aa8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 ADCY1Q08828 1119 aa8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 LSAMPQ13449 338 aa8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 RAPGEF1Q13905 1077 aa8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 SMAD2Q15796 467 aaKnown RBP8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 OSTM1Q86WC4 334 aa8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 CPNE8Q86YQ8 564 aa8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 KIAA1958Q8N8K9 716 aa8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 VPS37AQ8NEZ2 397 aa8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 PARD3BQ8TEW8 1205 aa8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 GATA6Q92908 595 aa8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 TAAR9Q96RI9 348 aa8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 SMURF1Q9HCE7 757 aa8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 TOMM22Q9NS69 142 aa8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 CCM2LQ9NUG4 571 aaPredicted RBP8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 DNM3Q9UQ16 869 aa8.15□□□□□ -1.1
TM9SF3-206ENST00000490192 ZNF561-AS1K7EIQ3 104 aa8.14□□□□□ -1.11
TM9SF3-206ENST00000490192 ADAMTS4O75173 837 aa8.14□□□□□ -1.11
TM9SF3-206ENST00000490192 OFD1O75665 1012 aa8.14□□□□□ -1.11
TM9SF3-206ENST00000490192 TCEA3O75764 348 aa8.14□□□□□ -1.11
TM9SF3-206ENST00000490192 ZNF267Q14586 743 aaPredicted RBP8.14□□□□□ -1.11
TM9SF3-206ENST00000490192 PDCD1Q15116 288 aa8.14□□□□□ -1.11
TM9SF3-206ENST00000490192 MSMPQ1L6U9 139 aa8.14□□□□□ -1.11
TM9SF3-206ENST00000490192 TOGARAM2Q6ZUX3 1019 aa8.14□□□□□ -1.11
TM9SF3-206ENST00000490192 FAM214BQ7L5A3 538 aa8.14□□□□□ -1.11
TM9SF3-206ENST00000490192 ENAHQ8N8S7 591 aaPredicted RBP8.14□□□□□ -1.11
TM9SF3-206ENST00000490192 ZNF610Q8N9Z0 462 aa8.14□□□□□ -1.11
TM9SF3-206ENST00000490192 PIWIL2Q8TC59 973 aaKnown RBP8.14□□□□□ -1.11
TM9SF3-206ENST00000490192 TGFBRAP1Q8WUH2 860 aa8.14□□□□□ -1.11
TM9SF3-206ENST00000490192 JADE3Q92613 823 aa8.14□□□□□ -1.11
TM9SF3-206ENST00000490192 GJA10Q969M2 543 aa8.14□□□□□ -1.11
TM9SF3-206ENST00000490192 GPR62Q9BZJ7 368 aa8.14□□□□□ -1.11
TM9SF3-206ENST00000490192 ZDHHC5Q9C0B5 715 aa8.14□□□□□ -1.11
TM9SF3-206ENST00000490192 CDIP1Q9H305 208 aa8.14□□□□□ -1.11
TM9SF3-206ENST00000490192 LCHNA4D1U4 455 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 DVL2O14641 736 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 KCNK3O14649 394 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 PAX4O43316 350 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 SYPP08247 313 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 MYL3P08590 195 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 FAM87AP0C7U9 286 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 MYBP10242 640 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 AKAP5P24588 427 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 BCL6P41182 706 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 TRAPPC10P48553 1259 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 USP14P54578 494 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 LAPTM5Q13571 262 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 CHST15Q7LFX5 561 aaPredicted RBP8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 VSIG10LQ86VR7 867 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 TP53INP2Q8IXH6 220 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 PTCHD1Q96NR3 888 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 JAM3Q9BX67 310 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 PCIF1Q9H4Z3 704 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 AP5S1Q9NUS5 200 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 CLDND1Q9NY35 253 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 CCDC39Q9UFE4 941 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 PTPN22Q9Y2R2 807 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 TIMM13Q9Y5L4 95 aaPredicted RBP8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 CAPN6Q9Y6Q1 641 aa8.13□□□□□ -1.11
TM9SF3-206ENST00000490192 NPHP1O15259 732 aa8.12□□□□□ -1.11
TM9SF3-206ENST00000490192 FGF10O15520 208 aaPredicted RBP8.12□□□□□ -1.11
TM9SF3-206ENST00000490192 KDM1AO60341 852 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms