RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 BAIAP3O94812 1187 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 DEXIO95424 95 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 RSPH10BP0C881 870 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 CKBP12277 381 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 FOSL2P15408 326 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 KCNA2P16389 499 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 SEMA3FQ13275 785 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 FAM160B1Q5W0V3 765 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 TYW1BQ6NUM6 668 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 SLC17A8Q8NDX2 589 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 SLC9A7Q96T83 725 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 GAS2L1Q99501 681 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-232ENST00000489053 LARP6Q9BRS8 491 aaKnown RBP10.38□□□□□ -0.75
HDAC6-232ENST00000489053 ZNF577Q9BSK1 485 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 AGXT2Q9BYV1 514 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 ZMYND12Q9H0C1 365 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 SH3GLB2Q9NR46 395 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 SETD4Q9NVD3 440 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 CXXC1Q9P0U4 656 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-232ENST00000489053 VPS54Q9P1Q0 977 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 NID2Q14112 1375 aa10.38□□□□□ -0.75
HDAC6-232ENST00000489053 A0A0C4DFX4 3053 aa10.37□□□□□ -0.75
HDAC6-232ENST00000489053 GRXCR1A8MXD5 290 aa10.37□□□□□ -0.75
HDAC6-232ENST00000489053 M0QZ92 97 aa10.37□□□□□ -0.75
HDAC6-232ENST00000489053 ATP9AO75110 1047 aa10.37□□□□□ -0.75
HDAC6-232ENST00000489053 CAND2O75155 1236 aa10.37□□□□□ -0.75
HDAC6-232ENST00000489053 CTSHP09668 335 aa10.37□□□□□ -0.75
HDAC6-232ENST00000489053 IGBP1P78318 339 aa10.37□□□□□ -0.75
HDAC6-232ENST00000489053 ZNF200P98182 395 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-232ENST00000489053 TOB2Q14106 344 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-232ENST00000489053 IKBKEQ14164 716 aa10.37□□□□□ -0.75
HDAC6-232ENST00000489053 PPP2R2DQ66LE6 453 aa10.37□□□□□ -0.75
HDAC6-232ENST00000489053 MIS18BP1Q6P0N0 1132 aa10.37□□□□□ -0.75
HDAC6-232ENST00000489053 TAF2Q6P1X5 1199 aa10.37□□□□□ -0.75
HDAC6-232ENST00000489053 CNKSR3Q6P9H4 555 aa10.37□□□□□ -0.75
HDAC6-232ENST00000489053 NIPA1Q7RTP0 329 aa10.37□□□□□ -0.75
HDAC6-232ENST00000489053 SERINC5Q86VE9 423 aa10.37□□□□□ -0.75
HDAC6-232ENST00000489053 CKAP2LQ8IYA6 745 aa10.37□□□□□ -0.75
HDAC6-232ENST00000489053 WASF1Q92558 559 aa10.37□□□□□ -0.75
HDAC6-232ENST00000489053 PBX4Q9BYU1 374 aa10.37□□□□□ -0.75
HDAC6-232ENST00000489053 ZNF576Q9H609 170 aa10.37□□□□□ -0.75
HDAC6-232ENST00000489053 BCAS3Q9H6U6 928 aa10.37□□□□□ -0.75
HDAC6-232ENST00000489053 AGO4Q9HCK5 861 aaKnown RBP10.37□□□□□ -0.75
HDAC6-232ENST00000489053 BRMS1Q9HCU9 246 aa10.37□□□□□ -0.75
HDAC6-232ENST00000489053 SAMM50Q9Y512 469 aa10.37□□□□□ -0.75
HDAC6-232ENST00000489053 NFASCO94856 1347 aa10.36□□□□□ -0.75
HDAC6-232ENST00000489053 RRN3P2A6NIE6 340 aa10.36□□□□□ -0.75
HDAC6-232ENST00000489053 IPO5O00410 1097 aaKnown RBP10.36□□□□□ -0.75
HDAC6-232ENST00000489053 MEIS1O00470 390 aa10.36□□□□□ -0.75
HDAC6-232ENST00000489053 TREHO43280 583 aa10.36□□□□□ -0.75
HDAC6-232ENST00000489053 MARCH6O60337 910 aa10.36□□□□□ -0.75
HDAC6-232ENST00000489053 RPLP2P05387 115 aaKnown RBP10.36□□□□□ -0.75
HDAC6-232ENST00000489053 ARP10275 920 aa10.36□□□□□ -0.75
HDAC6-232ENST00000489053 STAT5BP51692 787 aa10.36□□□□□ -0.75
HDAC6-232ENST00000489053 EVCP57679 992 aa10.36□□□□□ -0.75
HDAC6-232ENST00000489053 ACTR2P61160 394 aa10.36□□□□□ -0.75
HDAC6-232ENST00000489053 GRIK4Q16099 956 aa10.36□□□□□ -0.75
HDAC6-232ENST00000489053 PRR16Q569H4 304 aa10.36□□□□□ -0.75
HDAC6-232ENST00000489053 ZNF618Q5T7W0 954 aa10.36□□□□□ -0.75
HDAC6-232ENST00000489053 RASIP1Q5U651 963 aa10.36□□□□□ -0.75
HDAC6-232ENST00000489053 GALNT17Q6IS24 598 aa10.36□□□□□ -0.75
HDAC6-232ENST00000489053 PHOSPHO2Q8TCD6 241 aa10.36□□□□□ -0.75
HDAC6-232ENST00000489053 RASGRP4Q8TDF6 673 aa10.36□□□□□ -0.75
HDAC6-232ENST00000489053 CDX2Q99626 313 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-232ENST00000489053 NKX2-4Q9H2Z4 354 aa10.36□□□□□ -0.75
HDAC6-232ENST00000489053 RNPEPQ9H4A4 650 aa10.36□□□□□ -0.75
HDAC6-232ENST00000489053 UPF2Q9HAU5 1272 aaKnown RBP10.36□□□□□ -0.75
HDAC6-232ENST00000489053 TBC1D22BQ9NU19 505 aa10.36□□□□□ -0.75
HDAC6-232ENST00000489053 TUBE1Q9UJT0 475 aa10.36□□□□□ -0.75
HDAC6-232ENST00000489053 PCDHA11Q9Y5I1 949 aa10.36□□□□□ -0.75
HDAC6-232ENST00000489053 SCN10AQ9Y5Y9 1956 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 CCDC194A0A1B0GVG4 234 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 ABHD14A-ACY1A0A1B0GW23 586 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 GSTTP1A0A1W2PQM5 241 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 TLL1O43897 1013 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 LGR5O75473 907 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 AMHP03971 560 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 PBX2P40425 430 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 CLK2P49760 499 aaKnown RBP10.35□□□□□ -0.75
HDAC6-232ENST00000489053 SLC26A2P50443 739 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 NEK4P51957 841 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 RABGGTBP53611 331 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 KRT76Q01546 638 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 RBL2Q08999 1139 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 TRIM29Q14134 588 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 PKN1Q16512 942 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 FAM177A1Q8N128 213 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-232ENST00000489053 MAFAQ8NHW3 353 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-232ENST00000489053 CYP2W1Q8TAV3 490 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 LMBR1Q8WVP7 490 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 MYLIPQ8WY64 445 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 SEPT8Q92599 483 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 DHX38Q92620 1227 aaKnown RBP10.35□□□□□ -0.75
HDAC6-232ENST00000489053 GUCD1Q96NT3 240 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 PCDHA4Q9UN74 947 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 KIAA1217Q5T5P2 1943 aa10.35□□□□□ -0.75
HDAC6-232ENST00000489053 GAS7O60861 476 aa10.34□□□□□ -0.75
HDAC6-232ENST00000489053 PSAPP07602 524 aa10.34□□□□□ -0.75
HDAC6-232ENST00000489053 CYP3A4P08684 503 aa10.34□□□□□ -0.75
HDAC6-232ENST00000489053 IGFBP4P22692 258 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms